Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20lactis_20[refseq_20GCF_5F000002515.2_202004-07-02] 7 sequences; 10,729,447 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq5 131 1e-25 seq4 113 4e-20 seq1 96.9 3e-15 >seq5 Length=2234072 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || ||||| ||||| || || | || || | |||||||| | | Sbjct 75637 ATGCAAATTTTCGTCAAAACCTTAACCGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75578 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| |||||| ||||||||||| || ||||| || ||| Sbjct 75577 GACACCATCGATAACGTCAAGTCTAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAA 75518 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || ||| | |||| | || ||||| | ||||||| ||||| | | |||||| ||| Sbjct 75517 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCCGATTACAAC 75458 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || ||||||||||| || | ||| | || || ||||| ||||| || Sbjct 75457 ATCCAAAAAGAATCCACTTTGCATCTTGTTTTGAGATTAAGAGGTGG 75411 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || ||||| || ||||| || | || || | |||||||| | | Sbjct 75865 ATGCAAATTTTCGTCAAAACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75806 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| |||||| ||||||||||| || ||||| || ||| Sbjct 75805 GACACCATCGATAACGTCAAGTCTAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAA 75746 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || ||| | |||| | || ||||| | ||||||| ||||| | | |||||| ||| Sbjct 75745 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCCGATTACAAC 75686 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || ||||||||||| || | ||| | || || ||||| ||||| || Sbjct 75685 ATCCAAAAAGAATCCACTTTGCATCTTGTTTTGAGATTAAGAGGTGG 75639 Score = 123 bits (136), Expect = 2e-23 Identities = 169/236 (72%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || ||||| || ||||| || | || || | |||||||| | | Sbjct 75181 ATGCAAATTTTCGTCAAAACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75122 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| |||||| ||||||||||| || ||||| || ||| Sbjct 75121 GACACCATCGATAACGTCAAGTCTAAGATTCAAGACAAAGAAGGTATTCCTCCAGACCAA 75062 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || ||| | |||| | || ||||| | ||||||| ||||| | | || |||||| Sbjct 75061 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTATAAC 75002 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGACTATAATG 24226 || ||||| ||||| || | ||| | || || ||||| ||||| || | ||||| Sbjct 75001 ATCCAAAAGGAATCCACTTTACATCTTGTCTTGAGATTAAGAGGTGGCATCTAATG 74946 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || ||||| ||||| || || | || || | |||||||| | | Sbjct 75409 ATGCAAATTTTCGTCAAAACCTTAACCGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75350 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| |||||| ||||||||||| || ||||| || ||| Sbjct 75349 GACACCATCGATAACGTCAAGTCTAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAA 75290 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || ||| | |||| | || ||||| | ||||||| ||||| | | || |||||| Sbjct 75289 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTATAAC 75230 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || ||||| ||||| || | ||| | || || ||||| ||||| || Sbjct 75229 ATCCAAAAGGAATCCACTTTACATCTTGTCTTGAGATTAAGAGGTGG 75183 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047 || |||||| | || || || || |||||||| || | || || | ||||| || | Sbjct 76096 AACATGCAAATTTTCGTTAAGACTTTAACTGGTAAGACTATCACTTTGGAAGTTGAATCT 76037 Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107 ||||||||||| | || ||| |||||| ||||||||||| || ||||| || Sbjct 76036 TCTGACACCATCGATAACGTGAAATCGAAGATTCAAGACAAAGAAGGTATCCCTCCAGAC 75977 Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTAT 24167 ||||| ||| | |||| | || ||||| | ||||||| ||||| | | || ||| Sbjct 75976 CAACAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTAT 75917 Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| ||||| ||||| || | ||| | || || ||||| ||||| || Sbjct 75916 AACATCCAAAAGGAATCCACTTTACATCTTGTCTTGAGATTAAGAGGTGG 75867 >seq4 Length=1715506 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || ||||| ||||| || || | |||||| | |||||||| | | Sbjct 1545371 ATGCAAATTTTCGTCAAAACCTTAACAGGTAAGACCATTACCTTGGAAGTCGAATCTTCC 1545430 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | || || ||||| ||||| ||||| || ||||| || ||| Sbjct 1545431 GACACCATTGACAATGTTAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAA 1545490 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || ||| |||| | | || |||||| | ||||||| |||| | ||| || ||| Sbjct 1545491 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 1545550 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || ||||| ||||| || | || || || || ||||||||||| || Sbjct 1545551 ATCCAAAAGGAATCCACTTTGCACTTGGTCTTGAGATTGAGAGGTGG 1545597 >seq1 Length=1062590 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 24000 TTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATC 24059 || || || || || ||||| || | || || | |||||||| | ||||||||| Sbjct 59728 TTCGTCAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCCGACACCATT 59787 Query 24060 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTG 24119 || | ||||| |||||| ||||| ||||| || || || || ||||| ||| || Sbjct 59788 GACAATGTCAAGTCTAAGATTCAAGACAAGGAAGGTATCCCACCAGACCAACAAAGATTG 59847 Query 24120 ATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAA 24179 || | | || |||||| | ||||||| |||| | | || || ||||| ||||| Sbjct 59848 ATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACCTTGTCTGACTACAACATCCAAAAG 59907 Query 24180 GAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| || | || || || || ||||||||||| || Sbjct 59908 GAATCCACTTTGCACTTGGTTTTGAGATTGAGAGGTGG 59945 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935963321085