Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20lactis_20[refseq_20GCF_5F000002515.2_202004-07-02] 7 sequences; 10,729,447 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq5 123 2e-23 >seq5 Length=2234072 Score = 123 bits (136), Expect = 2e-23 Identities = 168/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || || || || |||||||| ||||||| | ||||| || || || Sbjct 75637 ATGCAAATTTTCGTCAAAACCTTAACCGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75578 Query 25059 GACACTATCGAGTCAC-TGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| ||||| | || | ||| | || | ||| ||||||||||| || || || |||| Sbjct 75577 GACACCATCGA-TAACGTCAAGTCTAAGATTCAA-GACAAAGAAGGTATCCCTCCAGACC 75520 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| | | |||||||| || || || || ||||||| | || || |||||||| Sbjct 75519 AACAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCCGATTACA 75460 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 | || |||||||||||||| | ||| | || | || ||||||| || Sbjct 75459 ACATCCAAAAAGAATCCACTTTGCATCTTGTTTTGAGATTAAGAGGTGG 75411 Score = 123 bits (136), Expect = 2e-23 Identities = 168/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || || || ||||| ||||| ||||||| | ||||| || || || Sbjct 75865 ATGCAAATTTTCGTCAAAACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75806 Query 25059 GACACTATCGAGTCAC-TGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| ||||| | || | ||| | || | ||| ||||||||||| || || || |||| Sbjct 75805 GACACCATCGA-TAACGTCAAGTCTAAGATTCAA-GACAAAGAAGGTATCCCTCCAGACC 75748 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| | | |||||||| || || || || ||||||| | || || |||||||| Sbjct 75747 AACAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCCGATTACA 75688 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 | || |||||||||||||| | ||| | || | || ||||||| || Sbjct 75687 ACATCCAAAAAGAATCCACTTTGCATCTTGTTTTGAGATTAAGAGGTGG 75639 Score = 114 bits (126), Expect = 1e-20 Identities = 166/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || || || ||||| ||||| ||||||| | ||||| || || || Sbjct 75181 ATGCAAATTTTCGTCAAAACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75122 Query 25059 GACACTATCGAGTCAC-TGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| ||||| | || | ||| | || | ||| ||||||||||| ||||| || |||| Sbjct 75121 GACACCATCGA-TAACGTCAAGTCTAAGATTCAA-GACAAAGAAGGTATTCCTCCAGACC 75064 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| | | |||||||| || || || || ||||||| | || || || || | Sbjct 75063 AACAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTATA 75004 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 | || ||||| |||||||| ||||| | || | || ||||||| || Sbjct 75003 ACATCCAAAAGGAATCCACTTTACATCTTGTCTTGAGATTAAGAGGTGG 74955 Score = 114 bits (126), Expect = 1e-20 Identities = 166/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || |||||||| || ||||| | ||||| | ||||| || || ||| Sbjct 76093 ATGCAAATTTTCGTTAAGACTTTAACTGGTAAGACTATCACTTTGGAAGTTGAATCTTCT 76034 Query 25059 GACACTATCGAGTCAC-TGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| ||||| | || |||| | || | ||| ||||||||||| || || || |||| Sbjct 76033 GACACCATCGA-TAACGTGAAATCGAAGATTCAA-GACAAAGAAGGTATCCCTCCAGACC 75976 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| | | |||||||| || || || || ||||||| | || || || || | Sbjct 75975 AACAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTATA 75916 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 | || ||||| |||||||| ||||| | || | || ||||||| || Sbjct 75915 ACATCCAAAAGGAATCCACTTTACATCTTGTCTTGAGATTAAGAGGTGG 75867 Score = 111 bits (122), Expect = 1e-19 Identities = 165/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || || || || |||||||| ||||||| | ||||| || || || Sbjct 75409 ATGCAAATTTTCGTCAAAACCTTAACCGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75350 Query 25059 GACACTATCGAGTCAC-TGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| ||||| | || | ||| | || | ||| ||||||||||| || || || |||| Sbjct 75349 GACACCATCGA-TAACGTCAAGTCTAAGATTCAA-GACAAAGAAGGTATCCCTCCAGACC 75292 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| | | |||||||| || || || || ||||||| | || || || || | Sbjct 75291 AACAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTATA 75232 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 | || ||||| |||||||| ||||| | || | || ||||||| || Sbjct 75231 ACATCCAAAAGGAATCCACTTTACATCTTGTCTTGAGATTAAGAGGTGG 75183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327963031705