Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20lactis_20[refseq_20GCF_5F000002515.2_202004-07-02] 7 sequences; 10,729,447 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq5 154 1e-32 seq4 127 2e-24 seq1 127 2e-24 seq3 105 6e-18 >seq5 Length=2234072 Score = 154 bits (170), Expect = 1e-32 Identities = 165/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || ||||| ||||||||||| || ||||| | ||||| ||| | || Sbjct 75637 ATGCAAATTTTCGTCAAAACCTTAACCGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75578 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | |||| || ||||||||||| || ||||| || || || ||| Sbjct 75577 GACACCATCGATAACGTCAAGTCTAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAA 75518 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || ||||| || || ||||| || ||| | | ||| | |||||||||||| Sbjct 75517 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCCGATTACAAC 75458 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436 || |||||||||||||| | ||| | |||||| |||| Sbjct 75457 ATCCAAAAAGAATCCACTTTGCATCTTGTTTTGAGATT 75420 Score = 145 bits (160), Expect = 6e-30 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || ||||| || || ||||| || ||||| | ||||| ||| | || Sbjct 75865 ATGCAAATTTTCGTCAAAACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75806 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | |||| || ||||||||||| || ||||| || || || ||| Sbjct 75805 GACACCATCGATAACGTCAAGTCTAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAA 75746 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || ||||| || || ||||| || ||| | | ||| | |||||||||||| Sbjct 75745 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCCGATTACAAC 75686 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436 || |||||||||||||| | ||| | |||||| |||| Sbjct 75685 ATCCAAAAAGAATCCACTTTGCATCTTGTTTTGAGATT 75648 Score = 136 bits (150), Expect = 3e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || ||||| ||||||||||| || ||||| | ||||| ||| | || Sbjct 75409 ATGCAAATTTTCGTCAAAACCTTAACCGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75350 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | |||| || ||||||||||| || ||||| || || || ||| Sbjct 75349 GACACCATCGATAACGTCAAGTCTAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAA 75290 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || ||||| || || ||||| || ||| | | ||| | || || || ||| Sbjct 75289 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTATAAC 75230 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436 || ||||| |||||||| ||||| | || ||| |||| Sbjct 75229 ATCCAAAAGGAATCCACTTTACATCTTGTCTTGAGATT 75192 Score = 134 bits (148), Expect = 1e-26 Identities = 163/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 ||| ||||||||||| ||||| |||||||| ||||| || ||||| | ||||| ||| | Sbjct 76097 AAACATGCAAATTTTCGTTAAGACTTTAACTGGTAAGACTATCACTTTGGAAGTTGAATC 76038 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 | || ||| | || | | ||| || ||||||||||| || ||||| || || || Sbjct 76037 TTCTGACACCATCGATAACGTGAAATCGAAGATTCAAGACAAAGAAGGTATCCCTCCAGA 75978 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394 |||||| | | || ||||| || || ||||| || ||| | | ||| | || || || Sbjct 75977 CCAACAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTA 75918 Query 22395 CAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436 ||||| ||||| |||||||| ||||| | || ||| |||| Sbjct 75917 TAACATCCAAAAGGAATCCACTTTACATCTTGTCTTGAGATT 75876 Score = 132 bits (146), Expect = 4e-26 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || ||||| || || ||||| || ||||| | ||||| ||| | || Sbjct 75181 ATGCAAATTTTCGTCAAAACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75122 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | |||| || ||||||||||| || |||||||| || || ||| Sbjct 75121 GACACCATCGATAACGTCAAGTCTAAGATTCAAGACAAAGAAGGTATTCCTCCAGACCAA 75062 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || ||||| || || ||||| || ||| | | ||| | || || || ||| Sbjct 75061 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTATAAC 75002 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436 || ||||| |||||||| ||||| | || ||| |||| Sbjct 75001 ATCCAAAAGGAATCCACTTTACATCTTGTCTTGAGATT 74964 >seq4 Length=1715506 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || ||||| ||||| ||||| || | || | ||||| ||| | || Sbjct 1545371 ATGCAAATTTTCGTCAAAACCTTAACAGGTAAGACCATTACCTTGGAAGTCGAATCTTCC 1545430 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || | || || || ||||||||||| |||||||| || || ||| Sbjct 1545431 GACACCATTGACAATGTTAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAA 1545490 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || ||||| || || || || || ||| | || | ||||| |||||| Sbjct 1545491 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 1545550 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || ||||| |||||||| | || || || ||| ||||| | || ||| Sbjct 1545551 ATCCAAAAGGAATCCACTTTGCACTTGGTCTTGAGATTGAGAGGTGGT 1545598 >seq1 Length=1062590 Score = 127 bits (140), Expect = 2e-24 Identities = 160/220 (73%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286 ||| || || || || || ||||| || ||||| | ||||| ||| | |||| ||| | Sbjct 59727 TTTCGTCAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCCGACACCAT 59786 Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346 ||| || |||| || |||||||||||||| ||||| ||||| || |||||| | | Sbjct 59787 TGACAATGTCAAGTCTAAGATTCAAGACAAGGAAGGTATCCCACCAGACCAACAAAGATT 59846 Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 || ||||| || || || || || ||| | ||| | || || |||||||| ||||| Sbjct 59847 GATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACCTTGTCTGACTACAACATCCAAAA 59906 Query 22407 AGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||||| | || || |||||| ||||| | || ||| Sbjct 59907 GGAATCCACTTTGCACTTGGTTTTGAGATTGAGAGGTGGT 59946 >seq3 Length=1753957 Score = 105 bits (116), Expect = 6e-18 Identities = 700/1111 (63%), Gaps = 40/1111 (4%) Strand=Plus/Plus Query 128776 GACTTGTCCACGGTAAATTTAATAGCGTCCGCTGCCGGCTTG-GTGCGCAAATAGTACAT 128834 ||||| || | ||||||| ||| || | | ||| | |||| || | | |||||||| Sbjct 693786 GACTTATCGATAGTAAATTGAATTGCAGCAGATGCAG-CTTGTGTTCTTAGGTAGTACAT 693844 Query 128835 GCCTGTTTTCAAACCGCTTTTCCAAGTGTGCATGTGAATCGTGGTCAACAATGCGTAGGT 128894 || || |||||||| ||||||| || | || || | || ||| | ||| Sbjct 693845 ACCAGTCTTCAAACCCTTTTTCCATCCGTAGAAATGCATGGAAGTTAACTTACCCATGGT 693904 Query 128895 GGGTTGACTCaaaaaaaTATTAAATGATTGACTTTGATCAATAAAGGGGCCGCGATCGGC 128954 ||| || | | ||||| || |||||| ||||||||| | | | || ||||| Sbjct 693905 TGGTGCACGAATATGGATATTTAAGGATTGAGATTGATCAATGTAAGCAGCACGGTCGGC 693964 Query 128955 AGCCATACCAATCAAAT--TTTTCACTTTCATTTCCCACACCGTTTTGTAAAGCTCTCTC 129012 ||||| | || | || |||| | || |||||| || || ||||| || || || Sbjct 693965 CGCCATGTCGATAATATGCTTTTGAGA--CAATTCCCAAACAGTCTTGTATAGGTCCTTC 694022 Query 129013 ACGTGTTTTGGTATTTCTTCAATGTTCTGCACGCTGCCGTTGTTTGCAATAATTTTGTTT 129072 | | || ||| || | | | |||||| | | || |||| |||||||| | | Sbjct 694023 AATTCTTGTGGGATATTTGGTAAGTTCTGAATGGAACCATTGTCGGCAATAATATGAGAT 694082 Query 129073 CGCATCTGTTCGTTGTACAAATTCAGTTTGATCAAATCGTCGGTCAAGTATTTGTTTATT 129132 ||| ||| | | | | || | | ||| || | |||||| ||| | Sbjct 694083 TTCATAGCTTCATCCCAAATACCCAAGTCAACCAAGTCATGCAATAAGTATGGGTTGACA 694142 Query 129133 ACTTGAAAGTCACCCGCCAAAACGCGCCGAACGTAAATGTTGTTGGTGAACGGCTCAAAC 129192 | ||| || ||||| | |||||| || ||| ||| |||||| ||| | || ||||| Sbjct 694143 ATTTGGAACTCACCAGACAAAACACGACGAGAGTACATGTTGGATGTGTATGGTTCAAAA 694202 Query 129193 GATTCATTGTTGCCTAATATTTGAGCCGTTGTCGCGGTGGGCATGTAAGCCACGCAAAGC 129252 |||| |||| || || ||||||| || | || || ||||| ||| || | | Sbjct 694203 CATTCGTTGTAACCCAAAATTTGAGATGTGGATGCTGTTGGCATTGGAGCAACCAACAAT 694262 Query 129253 GAGTTTCGCAAACCGTGCTGTTTAATGTCtttttttAATTGTGTCCAGTCCCACATCGAT 129312 ||||||| || ||| | | || || | || ||| || |||||||||| | | Sbjct 694263 GAGTTTCTCATACCATTCAACTTGATTTGTTCTTTCAAAGTATTCCAGTCCCATAGAGCA 694322 Query 129313 GTGGGTGTGTGATTCCACAAGTCGTATTGCAATATACCCAAACTGGCGGGACTGGAAAAG 129372 || ||||| | | ||| || ||| |||||||| ||| | || ||| || Sbjct 694323 GTTGGTGTCTTACCCCATAAATCGAATTGCAATTGACCTTGAGATGCAGGAG----AACC 694378 Query 129373 TAGGAATCGTGCAC----GCCGTAAGCTTTTGCCAATTC---GCAACTCGCTTCCAATGC 129425 | ||||| | || ||| | |||| |||||||| | || ||||| | || Sbjct 694379 TGGGAATGTTTCATAATGGCCTTCTTCTTTGGCCAATTCCATGGAA---GCTTCGCAGGC 694435 Query 129426 GCCAAAATAAATTGTTTCGGCAATTTTGGTGTTCAACACTTTGGCCTGGTCGCTTTCGTA 129485 ||| ||||| |||||| |||| |||||| || || | || || | Sbjct 694436 ACCATGGTAAATGGTTTCGAAGATTTCAATGTTCAGTTTCTTAGCTTCTTCAGAATCAAA 694495 Query 129486 CGGCATACGCAACATGGCAAATGTGTCGGCCAAACCTTGAATACCCACACCGATGGGTCG 129545 |||| ||||||||| ||| | |||||| | |||||| | ||||| | | || |||| Sbjct 694496 TGGCAAACGCAACATCATAAAAGCGTCGGCTAGACCTTGGACACCCAAAGCAATAGGTCT 694555 Query 129546 ATGTTTTCTATTGGATTTTTGTGCCGA--CAACAAGGGATAGTAGTTGATGTCTATAATT 129603 ||| | | || ||| || || | |||| || || ||||| |||||| ||| Sbjct 694556 GTGTCTCATGTTCGATCTTCTAGCGGTTTCAACTGGG--TAATAGTTACGGTCTATGATT 694613 Query 129604 TTGTTTAAATT-CTTGACCACAATTTTCGTTACGTATTTTAACATTTCAAAATTGTAC-T 129661 |||| || || | || | | || | | | | || | | ||||| ||||| | Sbjct 694614 CTGTTCAAGTTGCGTGTT-AGTACCTTAGCGATGCTGTGTAGCTTCTCAAAGTTGTATGT 694672 Query 129662 C-GCCTACATCGAT--GTCGACAAATTGATTGACAC-----AA----ATCGAGGCCAAAT 129709 | | | || | || ||| || | ||| | || || || ||||| | Sbjct 694673 CTGAGTTTTTCCGTCGGTAGACCT-TTCAATGAAAGCTGGTAACGCGATGGAAGCCAAGT 694731 Query 129710 TGCAGACGGCACTTTCGTTTTTGTCACTGTACTCGACAATTTCGGCGCACAAATTACTAT 129769 | || ||||| |||| | |||| || ||||||||||| ||||| || | Sbjct 694732 TACAAACGGCGGTTTCTGTAGGGTCAGAATATTCGACAATTTCACAACACAAGTTTGAAG 694791 Query 129770 TTTTAATGGTGCCCAAATGCTTTTGATTACTTTTCATGTTGCAAGCATCTTTGTACATCA 129829 |||||||| |||| | ||||||||| || |||| ||| |||||||| ||||| | || Sbjct 694792 ACTTAATGGTACCCAGGTTCTTTTGATTGCTCTTCAAGTTACAAGCATCCTTGTAAAGCA 694851 Query 129830 TGTACGGCGTGCCCGTTTCGACTTGCGTTTC 129860 || |||| || || ||||| ||||| ||| Sbjct 694852 TGAACGGAGTACCTGTTTCTGTTTGCGCTTC 694882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727964191955