Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20lactis_20[refseq_20GCF_5F000002515.2_202004-07-02]
7 sequences; 10,729,447 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq5 188 1e-42
seq1 179 7e-40
seq4 178 2e-39
>seq5
Length=2234072
Score = 188 bits (208), Expect = 1e-42
Identities = 160/197 (81%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 68265 GTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCG 68324
||||| |||||||||||||| |||||||| | || || |||||||| |||||||| ||
Sbjct 75441 GTGGATTCTTTTTGGATGTTGTAATCGGACAAGGTTCTGCCATCTTCCAACTGCTTACCT 75500
Query 68325 GCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTG 68384
|| || || | |||||||||||| || || || ||||| |||||||||||||| | ||||
Sbjct 75501 GCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTGTCTTGAATCTTAGACTTG 75560
Query 68385 ACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTC 68444
||| ||||||||||| | ||||| |||||||| |||||||| || || || | |||
Sbjct 75561 ACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTTACCGGTTAAGGTT 75620
Query 68445 TTGACGAATATCTGCAT 68461
|||||||| || |||||
Sbjct 75621 TTGACGAAAATTTGCAT 75637
Score = 188 bits (208), Expect = 1e-42
Identities = 160/197 (81%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 68265 GTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCG 68324
||||| |||||||||||||| |||||||| | || || |||||||| |||||||| ||
Sbjct 75669 GTGGATTCTTTTTGGATGTTGTAATCGGACAAGGTTCTGCCATCTTCCAACTGCTTACCT 75728
Query 68325 GCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTG 68384
|| || || | |||||||||||| || || || ||||| |||||||||||||| | ||||
Sbjct 75729 GCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTGTCTTGAATCTTAGACTTG 75788
Query 68385 ACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTC 68444
||| ||||||||||| | ||||| |||||||| |||||||| || || || | |||
Sbjct 75789 ACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTTACCAGTCAAGGTT 75848
Query 68445 TTGACGAATATCTGCAT 68461
|||||||| || |||||
Sbjct 75849 TTGACGAAAATTTGCAT 75865
Score = 187 bits (206), Expect = 5e-42
Identities = 167/208 (80%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313
|||| |||| ||||| || |||||||||||||| || || | || || |||||||| |
Sbjct 74974 CAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAGGTTCTGCCATCTTCCA 75033
Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373
||||||| || || || || | |||||||||||| || ||||| ||||| ||||||||||
Sbjct 75034 ACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGAATACCTTCTTTGTCTTGAA 75093
Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433
|||| | ||||||| ||||||||||| | ||||| |||||||| |||||||| || |
Sbjct 75094 TCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTTAC 75153
Query 68434 CCGTGAGGGTCTTGACGAATATCTGCAT 68461
| || | ||| |||||||| || |||||
Sbjct 75154 CAGTCAAGGTTTTGACGAAAATTTGCAT 75181
Score = 183 bits (202), Expect = 6e-41
Identities = 166/208 (80%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313
|||| |||| ||||| || |||||||||||||| || || | || || |||||||| |
Sbjct 75202 CAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAGGTTCTGCCATCTTCCA 75261
Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373
||||||| || || || || | |||||||||||| || || || ||||| ||||||||||
Sbjct 75262 ACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTGTCTTGAA 75321
Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433
|||| | ||||||| ||||||||||| | ||||| |||||||| |||||||| || |
Sbjct 75322 TCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTTAC 75381
Query 68434 CCGTGAGGGTCTTGACGAATATCTGCAT 68461
| || | ||| |||||||| || |||||
Sbjct 75382 CGGTTAAGGTTTTGACGAAAATTTGCAT 75409
Score = 165 bits (182), Expect = 2e-35
Identities = 162/208 (78%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313
|||| |||| ||||| || |||||||||||||| || || | || || |||||||| |
Sbjct 75886 CAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAGGTTCTGCCATCTTCCA 75945
Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373
||||||| || || || || | |||||||||||| || || || ||||| ||||||||||
Sbjct 75946 ACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTGTCTTGAA 76005
Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433
|||| | || ||| ||||||||||| | ||||| |||||||| ||||| || || |
Sbjct 76006 TCTTCGATTTCACGTTATCGATGGTGTCAGAAGATTCAACTTCCAAAGTGATAGTCTTAC 76065
Query 68434 CCGTGAGGGTCTTGACGAATATCTGCAT 68461
| || | ||||| ||||| || |||||
Sbjct 76066 CAGTTAAAGTCTTAACGAAAATTTGCAT 76093
>seq1
Length=1062590
Score = 179 bits (198), Expect = 7e-40
Identities = 162/204 (79%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| | ||||| || ||||||||||| || || || | || || |||||
Sbjct 59931 CAAAACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATC 59872
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || ||||| || || || || | |||||||||||| ||||| || |||||||||||
Sbjct 59871 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGGATACCTTCCTTGTC 59812
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||||||||| | |||||| || |||||||| | ||||| |||||||| ||||||||
Sbjct 59811 TTGAATCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGT 59752
Query 68429 TTTTCCCGTGAGGGTCTTGACGAA 68452
|| || || | ||||||||||||
Sbjct 59751 CTTACCAGTCAAGGTCTTGACGAA 59728
>seq4
Length=1715506
Score = 178 bits (196), Expect = 2e-39
Identities = 167/213 (78%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| | ||||| || ||||||||||| || ||||| | || || |||||
Sbjct 1545583 CAAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATC 1545524
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || ||||| || || || || | |||||||||||| || ||||| |||||||||||
Sbjct 1545523 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTC 1545464
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| ||||| | ||| || || |||||||| | ||||| ||||||||||| |||||
Sbjct 1545463 TTGGATCTTAGACTTAACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAATGGT 1545404
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || | ||| |||||||| || |||||
Sbjct 1545403 CTTACCTGTTAAGGTTTTGACGAAAATTTGCAT 1545371
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921622319358040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |