Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20lactis_20[refseq_20GCF_5F000002515.2_202004-07-02] 7 sequences; 10,729,447 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq5 188 1e-42 seq1 179 7e-40 seq4 178 2e-39 >seq5 Length=2234072 Score = 188 bits (208), Expect = 1e-42 Identities = 160/197 (81%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 68265 GTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCG 68324 ||||| |||||||||||||| |||||||| | || || |||||||| |||||||| || Sbjct 75441 GTGGATTCTTTTTGGATGTTGTAATCGGACAAGGTTCTGCCATCTTCCAACTGCTTACCT 75500 Query 68325 GCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTG 68384 || || || | |||||||||||| || || || ||||| |||||||||||||| | |||| Sbjct 75501 GCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTGTCTTGAATCTTAGACTTG 75560 Query 68385 ACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTC 68444 ||| ||||||||||| | ||||| |||||||| |||||||| || || || | ||| Sbjct 75561 ACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTTACCGGTTAAGGTT 75620 Query 68445 TTGACGAATATCTGCAT 68461 |||||||| || ||||| Sbjct 75621 TTGACGAAAATTTGCAT 75637 Score = 188 bits (208), Expect = 1e-42 Identities = 160/197 (81%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 68265 GTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCG 68324 ||||| |||||||||||||| |||||||| | || || |||||||| |||||||| || Sbjct 75669 GTGGATTCTTTTTGGATGTTGTAATCGGACAAGGTTCTGCCATCTTCCAACTGCTTACCT 75728 Query 68325 GCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTG 68384 || || || | |||||||||||| || || || ||||| |||||||||||||| | |||| Sbjct 75729 GCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTGTCTTGAATCTTAGACTTG 75788 Query 68385 ACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTC 68444 ||| ||||||||||| | ||||| |||||||| |||||||| || || || | ||| Sbjct 75789 ACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTTACCAGTCAAGGTT 75848 Query 68445 TTGACGAATATCTGCAT 68461 |||||||| || ||||| Sbjct 75849 TTGACGAAAATTTGCAT 75865 Score = 187 bits (206), Expect = 5e-42 Identities = 167/208 (80%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313 |||| |||| ||||| || |||||||||||||| || || | || || |||||||| | Sbjct 74974 CAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAGGTTCTGCCATCTTCCA 75033 Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373 ||||||| || || || || | |||||||||||| || ||||| ||||| |||||||||| Sbjct 75034 ACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGAATACCTTCTTTGTCTTGAA 75093 Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433 |||| | ||||||| ||||||||||| | ||||| |||||||| |||||||| || | Sbjct 75094 TCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTTAC 75153 Query 68434 CCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || | ||| |||||||| || ||||| Sbjct 75154 CAGTCAAGGTTTTGACGAAAATTTGCAT 75181 Score = 183 bits (202), Expect = 6e-41 Identities = 166/208 (80%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313 |||| |||| ||||| || |||||||||||||| || || | || || |||||||| | Sbjct 75202 CAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAGGTTCTGCCATCTTCCA 75261 Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373 ||||||| || || || || | |||||||||||| || || || ||||| |||||||||| Sbjct 75262 ACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTGTCTTGAA 75321 Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433 |||| | ||||||| ||||||||||| | ||||| |||||||| |||||||| || | Sbjct 75322 TCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTTAC 75381 Query 68434 CCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || | ||| |||||||| || ||||| Sbjct 75382 CGGTTAAGGTTTTGACGAAAATTTGCAT 75409 Score = 165 bits (182), Expect = 2e-35 Identities = 162/208 (78%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313 |||| |||| ||||| || |||||||||||||| || || | || || |||||||| | Sbjct 75886 CAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAGGTTCTGCCATCTTCCA 75945 Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373 ||||||| || || || || | |||||||||||| || || || ||||| |||||||||| Sbjct 75946 ACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTGTCTTGAA 76005 Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433 |||| | || ||| ||||||||||| | ||||| |||||||| ||||| || || | Sbjct 76006 TCTTCGATTTCACGTTATCGATGGTGTCAGAAGATTCAACTTCCAAAGTGATAGTCTTAC 76065 Query 68434 CCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || | ||||| ||||| || ||||| Sbjct 76066 CAGTTAAAGTCTTAACGAAAATTTGCAT 76093 >seq1 Length=1062590 Score = 179 bits (198), Expect = 7e-40 Identities = 162/204 (79%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| | ||||| || ||||||||||| || || || | || || ||||| Sbjct 59931 CAAAACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATC 59872 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || ||||| || || || || | |||||||||||| ||||| || ||||||||||| Sbjct 59871 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGGATACCTTCCTTGTC 59812 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||||||||| | |||||| || |||||||| | ||||| |||||||| |||||||| Sbjct 59811 TTGAATCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGT 59752 Query 68429 TTTTCCCGTGAGGGTCTTGACGAA 68452 || || || | |||||||||||| Sbjct 59751 CTTACCAGTCAAGGTCTTGACGAA 59728 >seq4 Length=1715506 Score = 178 bits (196), Expect = 2e-39 Identities = 167/213 (78%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| | ||||| || ||||||||||| || ||||| | || || ||||| Sbjct 1545583 CAAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATC 1545524 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || ||||| || || || || | |||||||||||| || ||||| ||||||||||| Sbjct 1545523 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTC 1545464 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| ||||| | ||| || || |||||||| | ||||| ||||||||||| ||||| Sbjct 1545463 TTGGATCTTAGACTTAACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAATGGT 1545404 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | ||| |||||||| || ||||| Sbjct 1545403 CTTACCTGTTAAGGTTTTGACGAAAATTTGCAT 1545371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921622319358040