Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20lactis_20[refseq_20GCF_5F000002515.2_202004-07-02]
7 sequences; 10,729,447 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq5 114 1e-20
seq4 82.4 8e-11
>seq5
Length=2234072
Score = 114 bits (126), Expect = 1e-20
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 64226 AATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGC 64285
||||| | || ||||| | || ||||||||||| ||||||||||| | | ||| |
Sbjct 75420 AATCTCAAAACAAGATGCAAAGTGGATTCTTTTTGGATGTTGTAATCGGACAAGGTTCTG 75479
Query 64286 GCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCT 64345
| ||||| | |||||| || ||| |||| | | || ||||| ||||| || ||||||
Sbjct 75480 CCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCT 75539
Query 64346 TTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTT 64405
|| ||||| || || ||| || || | || || | || ||||| | |||
Sbjct 75540 TTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTG 75599
Query 64406 ACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
| |||||| ||||| || ||||| ||||||||||||||
Sbjct 75600 ATGGTCTTACCGGTTAAGGTTTTGACGAAAATTTGCAT 75637
Score = 114 bits (126), Expect = 1e-20
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 64226 AATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGC 64285
||||| | || ||||| | || ||||||||||| ||||||||||| | | ||| |
Sbjct 75648 AATCTCAAAACAAGATGCAAAGTGGATTCTTTTTGGATGTTGTAATCGGACAAGGTTCTG 75707
Query 64286 GCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCT 64345
| ||||| | |||||| || ||| |||| | | || ||||| ||||| || ||||||
Sbjct 75708 CCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCT 75767
Query 64346 TTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTT 64405
|| ||||| || || ||| || || | || || | || ||||| | |||
Sbjct 75768 TTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTG 75827
Query 64406 ACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
| |||||| || ||||| ||||| ||||||||||||||
Sbjct 75828 ATGGTCTTACCAGTCAAGGTTTTGACGAAAATTTGCAT 75865
Score = 105 bits (116), Expect = 7e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 64226 AATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGC 64285
||||| | || ||||| | || ||||| ||||| ||||| || || | | ||| |
Sbjct 74964 AATCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAGGTTCTG 75023
Query 64286 GCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCT 64345
| ||||| | |||||| || ||| |||| | | || ||||| |||||||| ||||||
Sbjct 75024 CCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGAATACCTTCT 75083
Query 64346 TTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTT 64405
|| ||||| || || ||| || || | || || | || ||||| | |||
Sbjct 75084 TTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTG 75143
Query 64406 ACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
| |||||| || ||||| ||||| ||||||||||||||
Sbjct 75144 ATGGTCTTACCAGTCAAGGTTTTGACGAAAATTTGCAT 75181
Score = 100 bits (110), Expect = 3e-16
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 64226 AATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGC 64285
||||| | || ||||| | || ||||| ||||| ||||| || || | | ||| |
Sbjct 75192 AATCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAGGTTCTG 75251
Query 64286 GCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCT 64345
| ||||| | |||||| || ||| |||| | | || ||||| ||||| || ||||||
Sbjct 75252 CCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCT 75311
Query 64346 TTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTT 64405
|| ||||| || || ||| || || | || || | || ||||| | |||
Sbjct 75312 TTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTG 75371
Query 64406 ACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
| |||||| ||||| || ||||| ||||||||||||||
Sbjct 75372 ATGGTCTTACCGGTTAAGGTTTTGACGAAAATTTGCAT 75409
Score = 93.3 bits (102), Expect = 4e-14
Identities = 153/221 (69%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 64226 AATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGC 64285
||||| | || ||||| | || ||||| ||||| ||||| || || | | ||| |
Sbjct 75876 AATCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAGGTTCTG 75935
Query 64286 GCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCT 64345
| ||||| | |||||| || ||| |||| | | || ||||| ||||| || ||||||
Sbjct 75936 CCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCT 75995
Query 64346 TTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTT 64405
|| ||||| || || || || || | || ||| | || ||||| | |||
Sbjct 75996 TTGTCTTGAATCTTCGATTTCACGTTATCGATGGTGTCAGAAGATTCAACTTCCAAAGTG 76055
Query 64406 ACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
| ||||| || || ||||| || |||||||||||||| ||
Sbjct 76056 ATAGTCTTACCAGTTAAAGTCTTAACGAAAATTTGCATGTT 76096
>seq4
Length=1715506
Score = 82.4 bits (90), Expect = 8e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || | |||||| | || | || | || ||||| ||||| |||||||| || |
Sbjct 1545598 ACCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGA 1545539
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| || | | ||||| | ||||| || ||| | || | | || ||||| |||||
Sbjct 1545538 CAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGG 1545479
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||| ||||| || ||||| || || ||| ||| || | || || | || ||
Sbjct 1545478 AATACCTTCCTTGTCTTGGATCTTAGACTTAACATTGTCAATGGTGTCGGAAGATTCGAC 1545419
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||| | || | |||||| || || || ||||| ||||||||||||||
Sbjct 1545418 TTCCAAGGTAATGGTCTTACCTGTTAAGGTTTTGACGAAAATTTGCAT 1545371
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499644756281080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |