Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20lactis_20[refseq_20GCF_5F000002515.2_202004-07-02] 7 sequences; 10,729,447 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq4 98.7 1e-15 seq5 86.0 6e-12 >seq4 Length=1715506 Score = 98.7 bits (108), Expect = 1e-15 Identities = 163/233 (70%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | ||| || || || | | || |||||||| |||||||||||| | Sbjct 1545597 CCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGAC 1545538 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| | || || | ||| ||||| | | |||| | | |||||||| ||||| Sbjct 1545537 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGA 1545478 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||| ||||| ||| || || | |||| || | |||||||| || || || Sbjct 1545477 ATACCTTCCTTGTCTTGGATCTTAGACTTAACATTG-TCAATGGTGTCGGAAGATTCGAC 1545419 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCTT 138619 || | || | || ||||| || | ||||| || ||||| |||||||||| Sbjct 1545418 TTCCAAGGTAATGGTCTTACCTGTTAAGGTTTTGACGAAAATTTGCATGGCTT 1545366 >seq5 Length=2234072 Score = 86.0 bits (94), Expect = 6e-12 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| |||| || | ||| || | ||||| | || |||||||| ||||| ||||| Sbjct 74954 GCCACCTCTTAATCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGA 75013 Query 138447 CATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAG 138505 || || | || | || || | || ||||| | | | |||| | |||||||| |||| Sbjct 75014 CAAGGTTCTGCCA-TCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAG 75072 Query 138506 GTATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCC 138564 | |||||||||||||| ||| | || | || | | || | |||||||| || || Sbjct 75073 GAATACCTTCTTTGTC-TTGAATCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTCG 75131 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || || | || | || |||||||||| ||||| || ||||| ||||| Sbjct 75132 ACTTCCAAAGTGATGGTCTTACCAGTCAAGGTTTTGACGAAAATTTGCAT 75181 Score = 84.2 bits (92), Expect = 2e-11 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| || | |||||| | ||| | | || || ||||| |||||||| ||| | Sbjct 75639 CCACCTCTTAATCTCAAAACAAGATGCAAAGTGGATTCTTTTTGGATGTTGTAATCGGAC 75698 Query 138448 ATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || | || | || || | || ||||| | | | |||| | |||||||| ||||| Sbjct 75699 AAGGTTCTGCCA-TCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGG 75757 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 |||||||||||||| ||| | || | || | | || | |||||||| || || | Sbjct 75758 GATACCTTCTTTGTC-TTGAATCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTCGA 75816 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | || | || | || |||||||||| ||||| || ||||| ||||| Sbjct 75817 CTTCCAAAGTGATGGTCTTACCAGTCAAGGTTTTGACGAAAATTTGCAT 75865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262356577040