Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20lactis_20[refseq_20GCF_5F000002515.2_202004-07-02]
7 sequences; 10,729,447 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq5 143 2e-29
seq4 123 2e-23
seq1 104 2e-17
>seq5
Length=2234072
Score = 143 bits (158), Expect = 2e-29
Identities = 163/216 (75%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || ||||||| || ||||| |||||||| || |||||| | |||| | |
Sbjct 75423 CTCAAAACAAGATGCAAAGTGGATTCTTTTTGGATGTTGTAATCGGACAAGGTTCTGCCA 75482
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| ||||| || || ||||| | || |||| ||| ||||| || || || ||||||||
Sbjct 75483 TCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTG 75542
Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
|||||||| || |||| || | || | |||||||||||| |||||||| | ||| |
Sbjct 75543 TCTTGAATCTTAGACTTGA-CGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGAT 75601
Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || ||||||| ||||| || |||||||||||
Sbjct 75602 GGTCTTACCGGTTAAGGTTTTGACGAAAATTTGCAT 75637
Score = 140 bits (154), Expect = 3e-28
Identities = 162/216 (75%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || ||||| | || |||||||||||||| ||||| || | |||| | |
Sbjct 75195 CTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAGGTTCTGCCA 75254
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| ||||| || || ||||| | || |||| ||| ||||| || || || ||||||||
Sbjct 75255 TCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTG 75314
Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
|||||||| || |||| || | || | |||||||||||| |||||||| | ||| |
Sbjct 75315 TCTTGAATCTTAGACTTGA-CGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGAT 75373
Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || ||||||| ||||| || |||||||||||
Sbjct 75374 GGTCTTACCGGTTAAGGTTTTGACGAAAATTTGCAT 75409
Score = 134 bits (148), Expect = 1e-26
Identities = 161/216 (75%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || ||||| | || |||||||||||||| ||||| || | |||| | |
Sbjct 74967 CTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAGGTTCTGCCA 75026
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| ||||| || || ||||| | || |||| ||| ||||| || ||||| ||||||||
Sbjct 75027 TCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGAATACCTTCTTTG 75086
Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
|||||||| || |||| || | || | |||||||||||| |||||||| | ||| |
Sbjct 75087 TCTTGAATCTTAGACTTGA-CGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGAT 75145
Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || || | ||||| || |||||||||||
Sbjct 75146 GGTCTTACCAGTCAAGGTTTTGACGAAAATTTGCAT 75181
Score = 134 bits (148), Expect = 1e-26
Identities = 161/216 (75%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || ||||||| || ||||| |||||||| || |||||| | |||| | |
Sbjct 75651 CTCAAAACAAGATGCAAAGTGGATTCTTTTTGGATGTTGTAATCGGACAAGGTTCTGCCA 75710
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| ||||| || || ||||| | || |||| ||| ||||| || || || ||||||||
Sbjct 75711 TCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTG 75770
Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
|||||||| || |||| || | || | |||||||||||| |||||||| | ||| |
Sbjct 75771 TCTTGAATCTTAGACTTGA-CGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGAT 75829
Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || || | ||||| || |||||||||||
Sbjct 75830 GGTCTTACCAGTCAAGGTTTTGACGAAAATTTGCAT 75865
Score = 125 bits (138), Expect = 6e-24
Identities = 159/216 (74%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || ||||| | || |||||||||||||| ||||| || | |||| | |
Sbjct 75879 CTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAGGTTCTGCCA 75938
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| ||||| || || ||||| | || |||| ||| ||||| || || || ||||||||
Sbjct 75939 TCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTG 75998
Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
|||||||| || ||| | || | || | |||||| ||||| || ||||| | ||| |
Sbjct 75999 TCTTGAATCTTCGATTTCA-CGTTATCGATGGTGTCAGAAGATTCAACTTCCAAAGTGAT 76057
Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || |||| ||| || || |||||||||||
Sbjct 76058 AGTCTTACCAGTTAAAGTCTTAACGAAAATTTGCAT 76093
>seq4
Length=1715506
Score = 123 bits (136), Expect = 2e-23
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | |||| || |||||||||||||| || || ||| | ||| || |
Sbjct 1545585 CTCAAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCA 1545526
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||||||| || || || | ||||||| ||| ||||| || ||||| ||||| ||
Sbjct 1545525 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTG 1545466
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
||||| || || || | || | |||||||||||| |||||||| | ||||
Sbjct 1545465 TCTTGGATCTTAGACTTAACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAATG 1545406
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATCGC 45343
|| || || |||| ||||| || ||||||||||| ||
Sbjct 1545405 GTCTTACCTGTTAAGGTTTTGACGAAAATTTGCATGGC 1545368
>seq1
Length=1062590
Score = 104 bits (114), Expect = 2e-17
Identities = 147/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | |||| || |||||||||||||| || || || | |||| || |
Sbjct 59933 CTCAAAACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCA 59874
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||||||| || || || | ||||||| ||| ||||| || || || ||||| ||
Sbjct 59873 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGGATACCTTCCTTG 59814
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
|||||||| || |||| || | |||||||||||| |||||||| | ||| |
Sbjct 59813 TCTTGAATCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAAGTGATG 59754
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAA 45332
|| || || || | || || || |||
Sbjct 59753 GTCTTACCAGTCAAGGTCTTGACGAAA 59727
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452003160449720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |