Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20lactis_20[refseq_20GCF_5F000002515.2_202004-07-02] 7 sequences; 10,729,447 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq5 206 6e-48 seq4 185 2e-41 seq1 163 6e-35 >seq5 Length=2234072 Score = 206 bits (228), Expect = 6e-48 Identities = 181/223 (81%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977 ||| | |||||||||||| || | |||||| |||||||| || |||||||||| |||| | Sbjct 75644 TCTTAATCTCAAAACAAGATGCAAAGTGGATTCTTTTTGGATGTTGTAATCGGACAAG-G 75702 Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 |||| |||||||| | |||||||||||| || || | || ||||||||||||||| || | Sbjct 75703 TTCTGCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATAC 75762 Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097 |||||||||||||||| || ||||||||| || |||||||| ||| ||| ||||| | Sbjct 75763 CTTCTTTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTCGACTTCCA 75822 Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | ||||| || ||||| ||||| ||||| | |||||| Sbjct 75823 AAGTGATGGTCTTACCAGTCAAGGTTTTGACGAAAATTTGCAT 75865 Score = 201 bits (222), Expect = 3e-46 Identities = 180/223 (81%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977 ||| | |||||||||||| || | |||||| |||||||| || |||||||||| |||| | Sbjct 75416 TCTTAATCTCAAAACAAGATGCAAAGTGGATTCTTTTTGGATGTTGTAATCGGACAAG-G 75474 Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 |||| |||||||| | |||||||||||| || || | || ||||||||||||||| || | Sbjct 75475 TTCTGCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATAC 75534 Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097 |||||||||||||||| || ||||||||| || |||||||| ||| ||| ||||| | Sbjct 75535 CTTCTTTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTCGACTTCCA 75594 Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | ||||| || || || ||||| ||||| | |||||| Sbjct 75595 AAGTGATGGTCTTACCGGTTAAGGTTTTGACGAAAATTTGCAT 75637 Score = 188 bits (208), Expect = 2e-42 Identities = 177/223 (79%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977 ||| | |||||| ||||| || | |||||| || ||||| || || || || | |||| | Sbjct 74960 TCTTAATCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAG-G 75018 Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 |||| |||||||| | |||||||||||| || || | || |||||||||||||||||| | Sbjct 75019 TTCTGCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGAATAC 75078 Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097 |||||||||||||||| || ||||||||| || |||||||| ||| ||| ||||| | Sbjct 75079 CTTCTTTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTCGACTTCCA 75138 Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | ||||| || ||||| ||||| ||||| | |||||| Sbjct 75139 AAGTGATGGTCTTACCAGTCAAGGTTTTGACGAAAATTTGCAT 75181 Score = 179 bits (198), Expect = 8e-40 Identities = 175/223 (78%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977 ||| | |||||| ||||| || | |||||| || ||||| || || || || | |||| | Sbjct 75188 TCTTAATCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAG-G 75246 Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 |||| |||||||| | |||||||||||| || || | || ||||||||||||||| || | Sbjct 75247 TTCTGCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATAC 75306 Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097 |||||||||||||||| || ||||||||| || |||||||| ||| ||| ||||| | Sbjct 75307 CTTCTTTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTCGACTTCCA 75366 Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | ||||| || || || ||||| ||||| | |||||| Sbjct 75367 AAGTGATGGTCTTACCGGTTAAGGTTTTGACGAAAATTTGCAT 75409 Score = 170 bits (188), Expect = 4e-37 Identities = 173/223 (78%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977 ||| | |||||| ||||| || | |||||| || ||||| || || || || | |||| | Sbjct 75872 TCTTAATCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAG-G 75930 Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 |||| |||||||| | |||||||||||| || || | || ||||||||||||||| || | Sbjct 75931 TTCTGCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATAC 75990 Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097 |||||||||||||||| || || ||||| || |||||||| ||| ||| ||||| | Sbjct 75991 CTTCTTTGTCTTGAATCTTCGATTTCACGTTATCGATGGTGTCAGAAGATTCAACTTCCA 76050 Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | ||||| || || ||||| || ||||| | |||||| Sbjct 76051 AAGTGATAGTCTTACCAGTTAAAGTCTTAACGAAAATTTGCAT 76093 >seq4 Length=1715506 Score = 185 bits (204), Expect = 2e-41 Identities = 174/222 (78%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | |||||| || | ||| | |||||| || ||||| || ||||| |||| | ||| Sbjct 1545592 TCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAAGT 1545533 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||| | |||||||| || ||||| | || |||||||||||||||||| || Sbjct 1545532 TCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGAATACC 1545473 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| |||||||| || || ||| || || ||||||||||| ||| ||| ||||| | Sbjct 1545472 TTCCTTGTCTTGGATCTTAGACTTAACATTGTCAATGGTGTCGGAAGATTCGACTTCCAA 1545413 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| ||||| ||||| || ||||| ||||| | |||||| Sbjct 1545412 GGTAATGGTCTTACCTGTTAAGGTTTTGACGAAAATTTGCAT 1545371 >seq1 Length=1062590 Score = 163 bits (180), Expect = 6e-35 Identities = 166/214 (78%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977 ||| | ||||||||| | ||| | |||||| || ||||| || ||||| || | |||| | Sbjct 59940 TCTCAATCTCAAAACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAG-G 59882 Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 |||| |||||||| | |||||||| || ||||| | || |||||||||||| || || | Sbjct 59881 TTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGGATAC 59822 Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097 |||| ||||||||||| || |||||| || ||||||||||| ||| ||| ||||| | Sbjct 59821 CTTCCTTGTCTTGAATCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCA 59762 Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 || | ||||| || ||||| || || ||||| Sbjct 59761 AAGTGATGGTCTTACCAGTCAAGGTCTTGACGAA 59728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109481500493369