Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20lactis_20[refseq_20GCF_5F000002515.2_202004-07-02]
7 sequences; 10,729,447 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq5 206 6e-48
seq4 185 2e-41
seq1 163 6e-35
>seq5
Length=2234072
Score = 206 bits (228), Expect = 6e-48
Identities = 181/223 (81%), Gaps = 2/223 (1%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977
||| | |||||||||||| || | |||||| |||||||| || |||||||||| |||| |
Sbjct 75644 TCTTAATCTCAAAACAAGATGCAAAGTGGATTCTTTTTGGATGTTGTAATCGGACAAG-G 75702
Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037
|||| |||||||| | |||||||||||| || || | || ||||||||||||||| || |
Sbjct 75703 TTCTGCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATAC 75762
Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097
|||||||||||||||| || ||||||||| || |||||||| ||| ||| ||||| |
Sbjct 75763 CTTCTTTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTCGACTTCCA 75822
Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| | ||||| || ||||| ||||| ||||| | ||||||
Sbjct 75823 AAGTGATGGTCTTACCAGTCAAGGTTTTGACGAAAATTTGCAT 75865
Score = 201 bits (222), Expect = 3e-46
Identities = 180/223 (81%), Gaps = 2/223 (1%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977
||| | |||||||||||| || | |||||| |||||||| || |||||||||| |||| |
Sbjct 75416 TCTTAATCTCAAAACAAGATGCAAAGTGGATTCTTTTTGGATGTTGTAATCGGACAAG-G 75474
Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037
|||| |||||||| | |||||||||||| || || | || ||||||||||||||| || |
Sbjct 75475 TTCTGCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATAC 75534
Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097
|||||||||||||||| || ||||||||| || |||||||| ||| ||| ||||| |
Sbjct 75535 CTTCTTTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTCGACTTCCA 75594
Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| | ||||| || || || ||||| ||||| | ||||||
Sbjct 75595 AAGTGATGGTCTTACCGGTTAAGGTTTTGACGAAAATTTGCAT 75637
Score = 188 bits (208), Expect = 2e-42
Identities = 177/223 (79%), Gaps = 2/223 (1%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977
||| | |||||| ||||| || | |||||| || ||||| || || || || | |||| |
Sbjct 74960 TCTTAATCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAG-G 75018
Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037
|||| |||||||| | |||||||||||| || || | || |||||||||||||||||| |
Sbjct 75019 TTCTGCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGAATAC 75078
Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097
|||||||||||||||| || ||||||||| || |||||||| ||| ||| ||||| |
Sbjct 75079 CTTCTTTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTCGACTTCCA 75138
Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| | ||||| || ||||| ||||| ||||| | ||||||
Sbjct 75139 AAGTGATGGTCTTACCAGTCAAGGTTTTGACGAAAATTTGCAT 75181
Score = 179 bits (198), Expect = 8e-40
Identities = 175/223 (78%), Gaps = 2/223 (1%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977
||| | |||||| ||||| || | |||||| || ||||| || || || || | |||| |
Sbjct 75188 TCTTAATCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAG-G 75246
Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037
|||| |||||||| | |||||||||||| || || | || ||||||||||||||| || |
Sbjct 75247 TTCTGCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATAC 75306
Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097
|||||||||||||||| || ||||||||| || |||||||| ||| ||| ||||| |
Sbjct 75307 CTTCTTTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTCGACTTCCA 75366
Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| | ||||| || || || ||||| ||||| | ||||||
Sbjct 75367 AAGTGATGGTCTTACCGGTTAAGGTTTTGACGAAAATTTGCAT 75409
Score = 170 bits (188), Expect = 4e-37
Identities = 173/223 (78%), Gaps = 2/223 (1%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977
||| | |||||| ||||| || | |||||| || ||||| || || || || | |||| |
Sbjct 75872 TCTTAATCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAG-G 75930
Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037
|||| |||||||| | |||||||||||| || || | || ||||||||||||||| || |
Sbjct 75931 TTCTGCCATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATAC 75990
Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097
|||||||||||||||| || || ||||| || |||||||| ||| ||| ||||| |
Sbjct 75991 CTTCTTTGTCTTGAATCTTCGATTTCACGTTATCGATGGTGTCAGAAGATTCAACTTCCA 76050
Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| | ||||| || || ||||| || ||||| | ||||||
Sbjct 76051 AAGTGATAGTCTTACCAGTTAAAGTCTTAACGAAAATTTGCAT 76093
>seq4
Length=1715506
Score = 185 bits (204), Expect = 2e-41
Identities = 174/222 (78%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | |||||| || | ||| | |||||| || ||||| || ||||| |||| | |||
Sbjct 1545592 TCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAAGT 1545533
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| |||||||| | |||||||| || ||||| | || |||||||||||||||||| ||
Sbjct 1545532 TCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGAATACC 1545473
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| |||||||| || || ||| || || ||||||||||| ||| ||| ||||| |
Sbjct 1545472 TTCCTTGTCTTGGATCTTAGACTTAACATTGTCAATGGTGTCGGAAGATTCGACTTCCAA 1545413
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||| ||||| ||||| || ||||| ||||| | ||||||
Sbjct 1545412 GGTAATGGTCTTACCTGTTAAGGTTTTGACGAAAATTTGCAT 1545371
>seq1
Length=1062590
Score = 163 bits (180), Expect = 6e-35
Identities = 166/214 (78%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977
||| | ||||||||| | ||| | |||||| || ||||| || ||||| || | |||| |
Sbjct 59940 TCTCAATCTCAAAACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAG-G 59882
Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037
|||| |||||||| | |||||||| || ||||| | || |||||||||||| || || |
Sbjct 59881 TTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGGATAC 59822
Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097
|||| ||||||||||| || |||||| || ||||||||||| ||| ||| ||||| |
Sbjct 59821 CTTCCTTGTCTTGAATCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCA 59762
Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131
|| | ||||| || ||||| || || |||||
Sbjct 59761 AAGTGATGGTCTTACCAGTCAAGGTCTTGACGAA 59728
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109481500493369
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |