Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20lactis_20[refseq_20GCF_5F000002515.2_202004-07-02]
7 sequences; 10,729,447 total letters
Query= NC_019945.1
Length=132978
Score E
Sequences producing significant alignments: (Bits) Value
seq4 134 1e-26
seq5 109 5e-19
seq1 98.7 8e-16
>seq4
Length=1715506
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
|||||||| || || ||||| ||||| ||||| ||||||||| ||| ||| ||||
Sbjct 1545371 ATGCAAATTTTCGTCAAAACCTTAACAGGTAAGACCATTACCTTGGAAGTCGAATCTTCC 1545430
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| || | | | || | ||| || ||| ||||| || || | || ||| |||
Sbjct 1545431 GACACCATTGACAATGTTAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAA 1545490
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
|| ||| | |||||||| || || |||||||||||| || |||| || |||| || |||
Sbjct 1545491 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 1545550
Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780
|| ||||| ||||| ||| ||||| |||| || ||||| |||| ||
Sbjct 1545551 ATCCAAAAGGAATCCACTTTGCACTTGGTCTTGAGATTGAGAGGTGG 1545597
>seq5
Length=2234072
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
|||||||| || || ||||| ||||| ||||| ||||| || ||| ||| ||||
Sbjct 75637 ATGCAAATTTTCGTCAAAACCTTAACCGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75578
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| || | | | ||||| || || |||||||| || | || ||| |||
Sbjct 75577 GACACCATCGATAACGTCAAGTCTAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAA 75518
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
|| ||| | || ||||| || || || ||||||||| | ||| || ||||||| |||
Sbjct 75517 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCCGATTACAAC 75458
Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
|| ||||||||||| ||| |||| | || || |||||| |||| || ||
Sbjct 75457 ATCCAAAAAGAATCCACTTTGCATCTTGTTTTGAGATTAAGAGGTGGTAT 75408
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
|||||||| || || ||||| || || ||||| ||||| || ||| ||| ||||
Sbjct 75865 ATGCAAATTTTCGTCAAAACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75806
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| || | | | ||||| || || |||||||| || | || ||| |||
Sbjct 75805 GACACCATCGATAACGTCAAGTCTAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAA 75746
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
|| ||| | || ||||| || || || ||||||||| | ||| || ||||||| |||
Sbjct 75745 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCCGATTACAAC 75686
Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
|| ||||||||||| ||| |||| | || || |||||| |||| || ||
Sbjct 75685 ATCCAAAAAGAATCCACTTTGCATCTTGTTTTGAGATTAAGAGGTGGTAT 75636
>seq1
Length=1062590
Score = 98.7 bits (108), Expect = 8e-16
Identities = 156/224 (70%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 28563 TTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCAGAGACGGTG 28622
|| || || || || || ||||| ||||| || ||| ||| |||| || || |
Sbjct 59728 TTCGTCAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCCGACACCATT 59787
Query 28623 GCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTT 28682
| | || ||||| || || ||||| || || | || ||| ||||| ||| |
Sbjct 59788 GACAATGTCAAGTCTAAGATTCAAGACAAGGAAGGTATCCCACCAGACCAACAAAGATTG 59847
Query 28683 ATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAACATTCAAAAA 28742
|||||||| || || |||||||||||| || ||| || | || || ||||| |||||
Sbjct 59848 ATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACCTTGTCTGACTACAACATCCAAAAG 59907
Query 28743 GAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGATAAT 28786
||||| ||| ||||| |||| || ||||| |||| || || ||
Sbjct 59908 GAATCCACTTTGCACTTGGTTTTGAGATTGAGAGGTGGTATCAT 59951
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425404763707653
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |