Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20lactis_20[refseq_20GCF_5F000002515.2_202004-07-02]
7 sequences; 10,729,447 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq3 170 6e-37
seq2 113 1e-19
seq6 105 2e-17
seq5 87.8 5e-12
>seq3
Length=1753957
Score = 170 bits (188), Expect = 6e-37
Identities = 370/551 (67%), Gaps = 7/551 (1%)
Strand=Plus/Plus
Query 155979 CCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATAC 156038
|| |||||||||| | || | ||| || ||||||| ||| ||| || | ||
Sbjct 695109 CCATGATTCTTCCTGATATCAATGAAATCGAAGATATCAGAATGCCATGGTTCAATGTAT 695168
Query 156039 ATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTG 156095
| ||| || ||| |||||| ||||| || || || || |||||||| || |||
Sbjct 695169 AAAGCGAAGGCACCTGGTCTCTTGTTACCACCTTGGTCAACGTAACGAGCAGTGTTGTTG 695228
Query 156096 AAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAA 156155
||||||| | ||| ||||| |||||||| ||||| || ||||| || ||| | |||
Sbjct 695229 AAGACACGGATCATTGGAATGATACCATTAGAAGTTCCGTTGGTACCAGCAATGTAAGAA 695288
Query 156156 CCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGA 156215
|||| || || | || ||||| || | ||||||||||| | || || || |
Sbjct 695289 CCAGTAGAACGGATGTTGTGAATGTGCAACCCAATACCACCAGCAGTCTTTGAGATCATA 695348
Query 156216 GCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGA 156275
|| |||||||| | |||| | |||||||||| || ||||| |||| ||| | | |
Sbjct 695349 GCACATTCCTTCAAGGTATCGTAAATACCTTCGATGGAATCCTCTTTCATAGCAACCAAG 695408
Query 156276 TAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGA 156335
| || || | |||||| | || || ||||||||||| | |||||| | || ||
Sbjct 695409 AAACAAGATGACATTTGAGGATGAGGAGTACCAGCGTTGAACAATGTAGGAGAAGCGTGG 695468
Query 156336 ATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTC--TCAAGATTAGACC 156393
| ||||| | | |||||| | ||| ||||| |||| || || | || |
Sbjct 695469 GTGAAATATCTTTGAGACATTAGGTTGTAAGTCTC--TAATACTCGTTCTATATCGTTAC 695526
Query 156394 CGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCAT 156453
||||||||| | || || ||||| ||| || || ||||| || ||| | ||||
Sbjct 695527 CGTGAATACCAACAGCCACTCTCATAATCATGTGTTGTGGACGTTCAGCAACCTTACCAT 695586
Query 156454 CAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAATCAAACAGAAAAT 156513
| |||| || | ||| | ||||| | || || || ||||| |||| || | ||||
Sbjct 695587 CGATTCTCAACAAGTAAGAACGTTCTAAGGTCTTGAAACCGAAGTAATTGAATTGGAAAT 695646
Query 156514 CACGGTTGTAA 156524
| | || ||||
Sbjct 695647 CTCTGTCGTAA 695657
>seq2
Length=1320834
Score = 113 bits (124), Expect = 1e-19
Identities = 211/309 (68%), Gaps = 6/309 (2%)
Strand=Plus/Minus
Query 288849 CCTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGC 288908
||| ||||| ||||| | | | || || || || |||| |||| |||||| || |
Sbjct 1012605 CCTGTCAAATCTACCTGGTCTCATCAACGCCGGATCCAATACGTCGGGTCTGTTGGTACC 1012546
Query 288909 TGCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGATT 288968
||| | ||| ||||| || ||| |||| |||||||| |||| |||||
Sbjct 1012545 TGCAAGTACGACAATTTGATCTGTTGATGTAAACCCATCCATTTCAACCAAAAGCTGATT 1012486
Query 288969 AAGTGTTTGTTCCCTTTCATCATTTGAACCTC---TTGAATCACCCGAATCGCTCCtttt 289025
| |||| ||| ||||||||||||| ||| | | | | |||| | | ||||
Sbjct 1012485 TAATGTTGCTTCTCTTTCATCATTTGCACCACCCATGGCACCACC---TTTACCTCTTTC 1012429
Query 289026 tttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAAT 289085
|||||||| || |||||||| || | |||||| | || | ||| ||| ||| |
Sbjct 1012428 TTTACCAATGGCGTCAATTTCATCCACGAAAATGATGGCAGGTGCCATTTTTCTGGCATT 1012369
Query 289086 TGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGA 289145
| ||||||| || | ||||| || || || | |||||| |||||||||| ||||||||
Sbjct 1012368 TTCAAATAAGTCACGAACACGAGAAGCACCGACACCAACGAACATTTCTACGAATTCAGA 1012309
Query 289146 AGCGGATAC 289154
| | || ||
Sbjct 1012308 ACCTGAAAC 1012300
>seq6
Length=2602197
Score = 105 bits (116), Expect = 2e-17
Identities = 124/168 (74%), Gaps = 0/168 (0%)
Strand=Plus/Plus
Query 302553 ATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGT 302612
||||||| | ||| || || |||| | |||| |||||||| ||||||||||| ||
Sbjct 498975 ATCATAATGGACCATGATATCCTCCAAAGCTTTGACCAAACGACGTTGAATATAACCTGT 499034
Query 302613 TGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAA 302672
| || |||||| || || ||||| |||| ||| ||||||||||||| || ||||||||
Sbjct 499035 TTCAGCTGTTTTCACGGCGGTATCGATTAAACCTTCACGACCACCCATTGCGTGGAAGAA 499094
Query 302673 TAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACC 302720
| ||||| ||| ||| || | | | | || | || ||||||||
Sbjct 499095 AAACTCTTGGGGTGTTAGACCTCTCAAATATGAATTTTCCACGAAACC 499142
Score = 87.8 bits (96), Expect = 5e-12
Identities = 121/167 (72%), Gaps = 7/167 (4%)
Strand=Plus/Plus
Query 301815 AATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAA 301874
|||||| | | ||| |||||||| || || || |||||| || |||||||| ||
Sbjct 498222 AATTTCCTTTAAACGAGGAACACCTGAAGTAACCTT---CTTGGAGGCCACACCAGCGAA 498278
Query 301875 GTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATCAT 301934
||||||||||||| || | ||||| | |||||||| || ||| || || | |
Sbjct 498279 ATGGAAAGTATTCAATGTCATCTGAGTGGCAGGCTCACCGATGGATTGAGCAGCCAAAAC 498338
Query 301935 ACCAACCATTTCTCCTGGTGCTACAATAGACTTCTTGTAGGCATTGT 301981
|||||||||||| ||||| |||||||| ||| |||| |||||
Sbjct 498339 ACCAACCATTTCACCTGGATGAACAATAGA--TCT--TAGGAATTGT 498381
>seq5
Length=2234072
Score = 87.8 bits (96), Expect = 5e-12
Identities = 90/117 (77%), Gaps = 3/117 (3%)
Strand=Plus/Minus
Query 301815 AATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAA 301874
|||||||| ||||| ||||||||| |||| || || | | || ||||||||||||||
Sbjct 1899837 AATTTCTTTGATACGTGGAACACCAAGGGTGACATT---CATAGAAGCAACACCAGCAAA 1899781
Query 301875 GTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAAT 301931
|||||||| || | || | ||||||| |||||||| ||| |||||| ||||
Sbjct 1899780 ATGGAAAGTTTTTAATGTCATTTGAGTACCAGGCTCACCTATAGATTGTGCACCAAT 1899724
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471817467996359
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |