Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20lactis_20[refseq_20GCF_5F000002515.2_202004-07-02] 7 sequences; 10,729,447 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq3 170 6e-37 seq2 113 1e-19 seq6 105 2e-17 seq5 87.8 5e-12 >seq3 Length=1753957 Score = 170 bits (188), Expect = 6e-37 Identities = 370/551 (67%), Gaps = 7/551 (1%) Strand=Plus/Plus Query 155979 CCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATAC 156038 || |||||||||| | || | ||| || ||||||| ||| ||| || | || Sbjct 695109 CCATGATTCTTCCTGATATCAATGAAATCGAAGATATCAGAATGCCATGGTTCAATGTAT 695168 Query 156039 ATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTG 156095 | ||| || ||| |||||| ||||| || || || || |||||||| || ||| Sbjct 695169 AAAGCGAAGGCACCTGGTCTCTTGTTACCACCTTGGTCAACGTAACGAGCAGTGTTGTTG 695228 Query 156096 AAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAA 156155 ||||||| | ||| ||||| |||||||| ||||| || ||||| || ||| | ||| Sbjct 695229 AAGACACGGATCATTGGAATGATACCATTAGAAGTTCCGTTGGTACCAGCAATGTAAGAA 695288 Query 156156 CCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGA 156215 |||| || || | || ||||| || | ||||||||||| | || || || | Sbjct 695289 CCAGTAGAACGGATGTTGTGAATGTGCAACCCAATACCACCAGCAGTCTTTGAGATCATA 695348 Query 156216 GCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGA 156275 || |||||||| | |||| | |||||||||| || ||||| |||| ||| | | | Sbjct 695349 GCACATTCCTTCAAGGTATCGTAAATACCTTCGATGGAATCCTCTTTCATAGCAACCAAG 695408 Query 156276 TAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGA 156335 | || || | |||||| | || || ||||||||||| | |||||| | || || Sbjct 695409 AAACAAGATGACATTTGAGGATGAGGAGTACCAGCGTTGAACAATGTAGGAGAAGCGTGG 695468 Query 156336 ATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTC--TCAAGATTAGACC 156393 | ||||| | | |||||| | ||| ||||| |||| || || | || | Sbjct 695469 GTGAAATATCTTTGAGACATTAGGTTGTAAGTCTC--TAATACTCGTTCTATATCGTTAC 695526 Query 156394 CGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCAT 156453 ||||||||| | || || ||||| ||| || || ||||| || ||| | |||| Sbjct 695527 CGTGAATACCAACAGCCACTCTCATAATCATGTGTTGTGGACGTTCAGCAACCTTACCAT 695586 Query 156454 CAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAATCAAACAGAAAAT 156513 | |||| || | ||| | ||||| | || || || ||||| |||| || | |||| Sbjct 695587 CGATTCTCAACAAGTAAGAACGTTCTAAGGTCTTGAAACCGAAGTAATTGAATTGGAAAT 695646 Query 156514 CACGGTTGTAA 156524 | | || |||| Sbjct 695647 CTCTGTCGTAA 695657 >seq2 Length=1320834 Score = 113 bits (124), Expect = 1e-19 Identities = 211/309 (68%), Gaps = 6/309 (2%) Strand=Plus/Minus Query 288849 CCTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGC 288908 ||| ||||| ||||| | | | || || || || |||| |||| |||||| || | Sbjct 1012605 CCTGTCAAATCTACCTGGTCTCATCAACGCCGGATCCAATACGTCGGGTCTGTTGGTACC 1012546 Query 288909 TGCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGATT 288968 ||| | ||| ||||| || ||| |||| |||||||| |||| ||||| Sbjct 1012545 TGCAAGTACGACAATTTGATCTGTTGATGTAAACCCATCCATTTCAACCAAAAGCTGATT 1012486 Query 288969 AAGTGTTTGTTCCCTTTCATCATTTGAACCTC---TTGAATCACCCGAATCGCTCCtttt 289025 | |||| ||| ||||||||||||| ||| | | | | |||| | | |||| Sbjct 1012485 TAATGTTGCTTCTCTTTCATCATTTGCACCACCCATGGCACCACC---TTTACCTCTTTC 1012429 Query 289026 tttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAAT 289085 |||||||| || |||||||| || | |||||| | || | ||| ||| ||| | Sbjct 1012428 TTTACCAATGGCGTCAATTTCATCCACGAAAATGATGGCAGGTGCCATTTTTCTGGCATT 1012369 Query 289086 TGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGA 289145 | ||||||| || | ||||| || || || | |||||| |||||||||| |||||||| Sbjct 1012368 TTCAAATAAGTCACGAACACGAGAAGCACCGACACCAACGAACATTTCTACGAATTCAGA 1012309 Query 289146 AGCGGATAC 289154 | | || || Sbjct 1012308 ACCTGAAAC 1012300 >seq6 Length=2602197 Score = 105 bits (116), Expect = 2e-17 Identities = 124/168 (74%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 302553 ATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGT 302612 ||||||| | ||| || || |||| | |||| |||||||| ||||||||||| || Sbjct 498975 ATCATAATGGACCATGATATCCTCCAAAGCTTTGACCAAACGACGTTGAATATAACCTGT 499034 Query 302613 TGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAA 302672 | || |||||| || || ||||| |||| ||| ||||||||||||| || |||||||| Sbjct 499035 TTCAGCTGTTTTCACGGCGGTATCGATTAAACCTTCACGACCACCCATTGCGTGGAAGAA 499094 Query 302673 TAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACC 302720 | ||||| ||| ||| || | | | | || | || |||||||| Sbjct 499095 AAACTCTTGGGGTGTTAGACCTCTCAAATATGAATTTTCCACGAAACC 499142 Score = 87.8 bits (96), Expect = 5e-12 Identities = 121/167 (72%), Gaps = 7/167 (4%) Strand=Plus/Plus Query 301815 AATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAA 301874 |||||| | | ||| |||||||| || || || |||||| || |||||||| || Sbjct 498222 AATTTCCTTTAAACGAGGAACACCTGAAGTAACCTT---CTTGGAGGCCACACCAGCGAA 498278 Query 301875 GTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATCAT 301934 ||||||||||||| || | ||||| | |||||||| || ||| || || | | Sbjct 498279 ATGGAAAGTATTCAATGTCATCTGAGTGGCAGGCTCACCGATGGATTGAGCAGCCAAAAC 498338 Query 301935 ACCAACCATTTCTCCTGGTGCTACAATAGACTTCTTGTAGGCATTGT 301981 |||||||||||| ||||| |||||||| ||| |||| ||||| Sbjct 498339 ACCAACCATTTCACCTGGATGAACAATAGA--TCT--TAGGAATTGT 498381 >seq5 Length=2234072 Score = 87.8 bits (96), Expect = 5e-12 Identities = 90/117 (77%), Gaps = 3/117 (3%) Strand=Plus/Minus Query 301815 AATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAA 301874 |||||||| ||||| ||||||||| |||| || || | | || |||||||||||||| Sbjct 1899837 AATTTCTTTGATACGTGGAACACCAAGGGTGACATT---CATAGAAGCAACACCAGCAAA 1899781 Query 301875 GTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAAT 301931 |||||||| || | || | ||||||| |||||||| ||| |||||| |||| Sbjct 1899780 ATGGAAAGTTTTTAATGTCATTTGAGTACCAGGCTCACCTATAGATTGTGCACCAAT 1899724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471817467996359