Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20lactis_20[refseq_20GCF_5F000002515.2_202004-07-02]
7 sequences; 10,729,447 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq1 118 8e-22
seq5 116 3e-21
seq4 116 3e-21
>seq1
Length=1062590
Score = 118 bits (130), Expect = 8e-22
Identities = 159/219 (73%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || ||||| || | |||||||| ||||| ||||| || || |
Sbjct 59945 CCACCTCTCAATCTCAAAACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAC 59886
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| | | ||| || | ||| || |||||| | ||||||||||| || || || ||
Sbjct 59885 AAGGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGG 59826
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||||| || |||||||| ||| || | |||||| | || | ||||| ||| ||| ||
Sbjct 59825 ATACCTTCCTTGTCTTG-AATCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGAC 59767
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAA 29777
||| | ||| || || || ||||| ||||| || || ||
Sbjct 59766 TTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGACGAA 59728
>seq5
Length=2234072
Score = 116 bits (128), Expect = 3e-21
Identities = 148/201 (74%), Gaps = 2/201 (1%)
Strand=Plus/Plus
Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649
|||||||| ||||| |||||||| || | | ||| | ||| || | || || ||
Sbjct 75897 GTGGATTCCTTTTGGATGTTATAGTCAGACAAGGTTCTGCCATCTTCCAACTGCTTACCT 75956
Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTT 29708
||| | || |||||||| || || || || ||||| ||||||||||| ||| || | |||
Sbjct 75957 GCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTGTCTTG-AATCTTCGATTT 76015
Query 29709 GACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGT 29768
|| | || | ||||||||| ||| ||||| | ||| ||||| || |||||||| ||
Sbjct 76016 CACGTTATCGATGGTGTCAGAAGATTCAACTTCCAAAGTGATAGTCTTACCAGTTAAAGT 76075
Query 29769 TTTAACAAATATCTGCATTTT 29789
||||| || || ||||| ||
Sbjct 76076 CTTAACGAAAATTTGCATGTT 76096
Score = 111 bits (122), Expect = 1e-19
Identities = 145/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649
|||||||| ||||| |||||||| || | | ||| | ||| || | || || ||
Sbjct 74985 GTGGATTCCTTTTGGATGTTATAGTCAGACAAGGTTCTGCCATCTTCCAACTGCTTACCT 75044
Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTT 29708
||| | || |||||||| || || || |||||||| ||||||||||| ||| || | ||
Sbjct 75045 GCAAAAATTAATCTTTGTTGGTCTGGAGGAATACCTTCTTTGTCTTG-AATCTTAGACTT 75103
Query 29709 GACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGT 29768
||| | || | ||||| ||| ||| ||||| | ||| || || || ||||| |||||
Sbjct 75104 GACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTTACCAGTCAAGGT 75163
Query 29769 TTTAACAAATATCTGCAT 29786
||| || || || |||||
Sbjct 75164 TTTGACGAAAATTTGCAT 75181
Score = 111 bits (122), Expect = 1e-19
Identities = 145/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649
|||||||||||||| ||||| ||||| | | ||| | ||| || | || || ||
Sbjct 75441 GTGGATTCTTTTTGGATGTTGTAATCGGACAAGGTTCTGCCATCTTCCAACTGCTTACCT 75500
Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTT 29708
||| | || |||||||| || || || || ||||| ||||||||||| ||| || | ||
Sbjct 75501 GCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTGTCTTG-AATCTTAGACTT 75559
Query 29709 GACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGT 29768
||| | || | ||||| ||| ||| ||||| | ||| || || || || ||||||||
Sbjct 75560 GACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTTACCGGTTAAGGT 75619
Query 29769 TTTAACAAATATCTGCAT 29786
||| || || || |||||
Sbjct 75620 TTTGACGAAAATTTGCAT 75637
Score = 111 bits (122), Expect = 1e-19
Identities = 145/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649
|||||||||||||| ||||| ||||| | | ||| | ||| || | || || ||
Sbjct 75669 GTGGATTCTTTTTGGATGTTGTAATCGGACAAGGTTCTGCCATCTTCCAACTGCTTACCT 75728
Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTT 29708
||| | || |||||||| || || || || ||||| ||||||||||| ||| || | ||
Sbjct 75729 GCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTGTCTTG-AATCTTAGACTT 75787
Query 29709 GACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGT 29768
||| | || | ||||| ||| ||| ||||| | ||| || || || ||||| |||||
Sbjct 75788 GACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTTACCAGTCAAGGT 75847
Query 29769 TTTAACAAATATCTGCAT 29786
||| || || || |||||
Sbjct 75848 TTTGACGAAAATTTGCAT 75865
Score = 107 bits (118), Expect = 1e-18
Identities = 144/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649
|||||||| ||||| |||||||| || | | ||| | ||| || | || || ||
Sbjct 75213 GTGGATTCCTTTTGGATGTTATAGTCAGACAAGGTTCTGCCATCTTCCAACTGCTTACCT 75272
Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTT 29708
||| | || |||||||| || || || || ||||| ||||||||||| ||| || | ||
Sbjct 75273 GCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTGTCTTG-AATCTTAGACTT 75331
Query 29709 GACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGT 29768
||| | || | ||||| ||| ||| ||||| | ||| || || || || ||||||||
Sbjct 75332 GACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTTACCGGTTAAGGT 75391
Query 29769 TTTAACAAATATCTGCAT 29786
||| || || || |||||
Sbjct 75392 TTTGACGAAAATTTGCAT 75409
>seq4
Length=1715506
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || ||||| || | |||||||| ||||| ||||| || || |
Sbjct 1545597 CCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGAC 1545538
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | | ||| || | ||| || |||||| | ||||||||||| || || || |||
Sbjct 1545537 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGA 1545478
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
||||| || |||||||| | || || ||| | || | ||||| ||| ||| |||
Sbjct 1545477 ATACCTTCCTTGTCTTGGATCTTAGACTTAACATTGTCAATGGTGTCGGAAGATTCGACT 1545418
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| | || || || || || ||||||||||| || || || |||||
Sbjct 1545417 TCCAAGGTAATGGTCTTACCTGTTAAGGTTTTGACGAAAATTTGCAT 1545371
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385219167135987
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |