Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20lactis_20[refseq_20GCF_5F000002515.2_202004-07-02] 7 sequences; 10,729,447 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq5 149 1e-30 seq4 122 2e-22 seq1 116 9e-21 >seq5 Length=2234072 Score = 149 bits (164), Expect = 1e-30 Identities = 154/202 (76%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 |||||| | || || || || |||||||||||||| ||| ||| ||||| |||| Sbjct 75623 CAAAACCTTAACCGGTAAGACCATCACTTTGGAAGTCGAATCTTCCGACACCATCGATAA 75564 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||||||||| |||||||| || || ||| |||||| | || || Sbjct 75563 CGTCAAGTCTAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAACAAAGATTAATTTT 75504 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || ||||||||||||||||| || || ||| ||||||||||| |||| ||||| || Sbjct 75503 TGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCCGATTACAACATCCAAAAAGAATC 75444 Query 206364 TACTCTTCACCTTGTTTTGAGA 206385 ||| | || |||||||||||| Sbjct 75443 CACTTTGCATCTTGTTTTGAGA 75422 Score = 149 bits (164), Expect = 1e-30 Identities = 154/202 (76%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 |||||| | || || || || |||||||||||||| ||| ||| ||||| |||| Sbjct 75851 CAAAACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCCGACACCATCGATAA 75792 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||||||||| |||||||| || || ||| |||||| | || || Sbjct 75791 CGTCAAGTCTAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAACAAAGATTAATTTT 75732 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || ||||||||||||||||| || || ||| ||||||||||| |||| ||||| || Sbjct 75731 TGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCCGATTACAACATCCAAAAAGAATC 75672 Query 206364 TACTCTTCACCTTGTTTTGAGA 206385 ||| | || |||||||||||| Sbjct 75671 CACTTTGCATCTTGTTTTGAGA 75650 Score = 131 bits (144), Expect = 4e-25 Identities = 150/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 |||||| | || || || || |||||||||||||| ||| ||| ||||| |||| Sbjct 75167 CAAAACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCCGACACCATCGATAA 75108 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||||||||| |||||||| ||| || ||| |||||| | || || Sbjct 75107 CGTCAAGTCTAAGATTCAAGACAAAGAAGGTATTCCTCCAGACCAACAAAGATTAATTTT 75048 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || ||||||||||||||||| || || ||| | || || ||| |||| || || || Sbjct 75047 TGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTATAACATCCAAAAGGAATC 74988 Query 206364 TACTCTTCACCTTGTTTTGAGA 206385 ||| | || ||||| |||||| Sbjct 74987 CACTTTACATCTTGTCTTGAGA 74966 Score = 125 bits (138), Expect = 2e-23 Identities = 149/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 |||||| | || || || || |||||||||||||| ||| ||| ||||| |||| Sbjct 75395 CAAAACCTTAACCGGTAAGACCATCACTTTGGAAGTCGAATCTTCCGACACCATCGATAA 75336 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||||||||| |||||||| || || ||| |||||| | || || Sbjct 75335 CGTCAAGTCTAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAACAAAGATTAATTTT 75276 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || ||||||||||||||||| || || ||| | || || ||| |||| || || || Sbjct 75275 TGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTATAACATCCAAAAGGAATC 75216 Query 206364 TACTCTTCACCTTGTTTTGAGA 206385 ||| | || ||||| |||||| Sbjct 75215 CACTTTACATCTTGTCTTGAGA 75194 Score = 122 bits (134), Expect = 2e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || |||||||||||||| ||| ||||||||| |||| || || Sbjct 76069 ACTGGTAAGACTATCACTTTGGAAGTTGAATCTTCTGACACCATCGATAACGTGAAATCG 76010 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||||||||| |||||||| || || ||| |||||| | || || || || ||| Sbjct 76009 AAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAACAAAGATTAATTTTTGCAGGTAAG 75950 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 |||||||||||||| || || ||| | || || ||| |||| || || || ||| | || Sbjct 75949 CAGTTGGAAGATGGCAGAACCTTGTCTGACTATAACATCCAAAAGGAATCCACTTTACAT 75890 Query 206374 CTTGTTTTGAGA 206385 ||||| |||||| Sbjct 75889 CTTGTCTTGAGA 75878 >seq4 Length=1715506 Score = 122 bits (134), Expect = 2e-22 Identities = 148/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 |||||| | ||||| || || || || |||||||| ||| ||| ||||| | || Sbjct 1545385 CAAAACCTTAACAGGTAAGACCATTACCTTGGAAGTCGAATCTTCCGACACCATTGACAA 1545444 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||| ||||| || ||||| ||| || ||| |||||| | ||||| Sbjct 1545445 TGTTAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAACAAAGATTGATCTT 1545504 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || ||||| ||||||||||| || |||||| |||| |||||| |||| || || || Sbjct 1545505 TGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAACATCCAAAAGGAATC 1545564 Query 206364 TACTCTTCACCTTGTTTTGAGA 206385 ||| | ||| | || |||||| Sbjct 1545565 CACTTTGCACTTGGTCTTGAGA 1545586 >seq1 Length=1062590 Score = 116 bits (128), Expect = 9e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || |||||||||||||| ||| ||| ||||| | || || ||| Sbjct 59743 ACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCCGACACCATTGACAATGTCAAGTCT 59802 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||||||||| || ||||| || || ||| |||||| | ||||| || || ||| Sbjct 59803 AAGATTCAAGACAAGGAAGGTATCCCACCAGACCAACAAAGATTGATCTTTGCTGGTAAG 59862 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || ||||||||||| || || ||| | || |||||| |||| || || || ||| | ||| Sbjct 59863 CAATTGGAAGATGGTAGAACCTTGTCTGACTACAACATCCAAAAGGAATCCACTTTGCAC 59922 Query 206374 CTTGTTTTGAGA 206385 | ||||||||| Sbjct 59923 TTGGTTTTGAGA 59934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820694005447