Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20lactis_20[refseq_20GCF_5F000002515.2_202004-07-02]
7 sequences; 10,729,447 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq5 111 1e-19
seq4 91.5 1e-13
>seq5
Length=2234072
Score = 111 bits (122), Expect = 1e-19
Identities = 163/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | || || ||||| |||||||| || | ||||| | ||||||||| | |
Sbjct 75637 ATGCAAATTTTCGTCAAAACCTTAACCGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75578
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| || ||||| | || || || ||| || ||||| ||||| || || || ||
Sbjct 75577 GACACCATCGATAACGTCAAGTCTAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAA 75518
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352
|||||| | |||| | || || || | ||||||| |||| |||| ||||||||
Sbjct 75517 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTC--CGATTACA 75460
Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
| || |||||||||||||| | ||| | || || ||||| ||||| ||
Sbjct 75459 ACATCCAAAAAGAATCCACTTTGCATCTTGTTTTGAGATTAAGAGGTGG 75411
Score = 102 bits (112), Expect = 7e-17
Identities = 161/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | || || ||||| || || || || | ||||| | ||||||||| | |
Sbjct 75865 ATGCAAATTTTCGTCAAAACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75806
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| || ||||| | || || || ||| || ||||| ||||| || || || ||
Sbjct 75805 GACACCATCGATAACGTCAAGTCTAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAA 75746
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352
|||||| | |||| | || || || | ||||||| |||| |||| ||||||||
Sbjct 75745 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTC--CGATTACA 75688
Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
| || |||||||||||||| | ||| | || || ||||| ||||| ||
Sbjct 75687 ACATCCAAAAAGAATCCACTTTGCATCTTGTTTTGAGATTAAGAGGTGG 75639
>seq4
Length=1715506
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233
||||||| | || || ||||| ||||| || || | || || | ||||||||| |
Sbjct 1545370 CATGCAAATTTTCGTCAAAACCTTAACAGGTAAGACCATTACCTTGGAAGTCGAATCTTC 1545429
Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293
||| || || || | || || || || || || || ||||| || || || ||
Sbjct 1545430 CGACACCATTGACAATGTTAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCA 1545489
Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353
|||||| | || | | || || ||| | ||||||| ||||| | | ||| |||||
Sbjct 1545490 ACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAA 1545549
Query 25354 TATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
|| ||||| |||||||| | || || || || ||||||||||| ||
Sbjct 1545550 CATCCAAAAGGAATCCACTTTGCACTTGGTCTTGAGATTGAGAGGTGG 1545597
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445094361054240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |