Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20lactis_20[refseq_20GCF_5F000002515.2_202004-07-02] 7 sequences; 10,729,447 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq3 114 1e-20 >seq3 Length=1753957 Score = 114 bits (126), Expect = 1e-20 Identities = 350/537 (65%), Gaps = 3/537 (1%) Strand=Plus/Minus Query 19118 ATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACGAC 19177 ||| |||| || || || || || || |||| | ||||| ||||| ||| || Sbjct 695551 ATGAGAGTGGCTGTTGGTATTCACGGTAACGATATAGAACGAGTATTAGAGACTTACAAC 695492 Query 19178 CTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGAAC 19237 || ||| || | | ||||| ||||| | || || | |||||||| ||||| Sbjct 695491 CTAATGTCTCAAAGATATTTCACCCACGCTTCTCCTACATTGTTCAACGCTGGTACTCCT 695432 Query 19238 AACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCATC 19297 | || || ||||| |||||| | || |||||||| || || ||| || || || Sbjct 695431 CATCCTCAAATGTCATCTTGTTTCTTGGTTGCTATGAAAGAGGATTCCATCGAAGGTATT 695372 Query 19298 TACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCCAC 19357 ||||| || | ||||| || || ||||| ||| | || ||||| ||| | ||| Sbjct 695371 TACGATACCTTGAAGGAATGTGCTATGATCTCAAAGACTGCTGGTGGTATTGGGTTGCAC 695312 Query 19358 -TGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGACGG 19416 | | | || ||||| || | |||| | || ||| || |||||| | | || Sbjct 695311 ATTCAC-AACATCCGTTCTACTGGTTCTTACATTGCTGGTACCAACGGAACTTCTAATGG 695253 Query 19417 TATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGCGG 19476 |||| | |||||| |||| |||||||||||||| || | ||||| |||| || || Sbjct 695252 TATCATTCCAATGATCCGTGTCTTCAACAACACTGCTCGTTACGTTGACCAAGGTGGTAA 695193 Query 19477 CAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGATTT 19536 ||| | || | ||||| | ||| | || |||||||| | || || | ||||| Sbjct 695192 CAAGAGACCAGGTGCCTTCGCTTTATACATTGAACCATGGCATTCTGATATCTTCGATTT 695133 Query 19537 CCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACGGC 19596 | | || | | ||| || || | || || || || | | || | ||| | || Sbjct 695132 CATTGATATCAGGAAGAATCATGGAAAGGAAGAAATTCGTGCTAGAGATTTATTCCCTGC 695073 Query 19597 CTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCT 19653 ||||||||||| || | |||||| ||| || || ||| || | || ||| |||| Sbjct 695072 ATTGTGGATTCCTGATTTGTTCATGAAGAGAGTGGAAAAGAACCAGGACTGG-ACCT 695017 Score = 87.8 bits (96), Expect = 2e-12 Identities = 145/209 (69%), Gaps = 8/209 (4%) Strand=Plus/Minus Query 20604 ATATCCCCCAGAACCTCAAGGACATTTACAGGACCGTATGGGAAATCCCACAGAAGAGCA 20663 ||||||| || | | |||||| | |||| ||| || |||||| | | || ||| | Sbjct 694038 ATATCCCACAAGAATTGAAGGACCTATACAAGACTGTTTGGGAATTGTCTCAAAAGCATA 693979 Query 20664 TCATCGACATGGCGGCCGATCGCGGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTC- 20722 | ||||||||||||||||| || | || ||||| || || || || || | ||| || Sbjct 693978 TTATCGACATGGCGGCCGACCGTGCTGCTTACATTGATCAATCTCAATCCTTAAATATCC 693919 Query 20723 ---TTCATGGAGAATCCGAGCCTGGCGAAGCTGAGCTCCATGCATATGTACGGCTGGCAC 20779 ||| || | || | | ||| ||| | | ||||||||| | ||||| ||| | Sbjct 693918 ATATTCGTGCA----CCAACCATGGGTAAGTTAACTTCCATGCATTTCTACGGATGGAAA 693863 Query 20780 AAGGGGCTCAAGACGGGCATGTACTATCT 20808 ||||| | ||||| || |||||||| || Sbjct 693862 AAGGGTTTGAAGACTGGTATGTACTACCT 693834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548524752004080