Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20lactis_20[refseq_20GCF_5F000002515.2_202004-07-02]
7 sequences; 10,729,447 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq5 136 5e-27
seq3 131 2e-25
seq4 127 2e-24
seq1 116 4e-21
>seq5
Length=2234072
Score = 136 bits (150), Expect = 5e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || || ||||| | || || |||||||| ||| | || ||||| || |
Sbjct 76093 ATGCAAATTTTCGTTAAGACTTTAACTGGTAAGACTATCACTTTGGAAGTTGAATCTTCT 76034
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | || |||| | || ||||| ||||| || || || |||||||||||
Sbjct 76033 GACACCATCGATAACGTGAAATCGAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAA 75974
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | |||||||||| |||||||| | || |||| | ||| | | ||||||||
Sbjct 75973 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTATAAC 75914
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
||||||||||||||||| | ||||| ||||||
Sbjct 75913 ATCCAAAAGGAATCCACTTTACATCTTGTCTTG 75881
Score = 132 bits (146), Expect = 5e-26
Identities = 157/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || ||||| || | || || ||||| || ||| | || || || ||
Sbjct 75181 ATGCAAATTTTCGTCAAAACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75122
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | || | ||| |||| ||||| ||||| || || ||||||||||||||
Sbjct 75121 GACACCATCGATAACGTCAAGTCTAAGATTCAAGACAAAGAAGGTATTCCTCCAGACCAA 75062
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | |||||||||| |||||||| | || |||| | ||| | | ||||||||
Sbjct 75061 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTATAAC 75002
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
||||||||||||||||| | ||||| ||||||
Sbjct 75001 ATCCAAAAGGAATCCACTTTACATCTTGTCTTG 74969
Score = 132 bits (146), Expect = 5e-26
Identities = 157/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || ||||| || | ||||| ||||| || ||| | || || || ||
Sbjct 75409 ATGCAAATTTTCGTCAAAACCTTAACCGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75350
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | || | ||| |||| ||||| ||||| || || || |||||||||||
Sbjct 75349 GACACCATCGATAACGTCAAGTCTAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAA 75290
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | |||||||||| |||||||| | || |||| | ||| | | ||||||||
Sbjct 75289 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTATAAC 75230
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
||||||||||||||||| | ||||| ||||||
Sbjct 75229 ATCCAAAAGGAATCCACTTTACATCTTGTCTTG 75197
Score = 114 bits (126), Expect = 1e-20
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || ||||| || | ||||| ||||| || ||| | || || || ||
Sbjct 75637 ATGCAAATTTTCGTCAAAACCTTAACCGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75578
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | || | ||| |||| ||||| ||||| || || || |||||||||||
Sbjct 75577 GACACCATCGATAACGTCAAGTCTAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAA 75518
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | |||||||||| |||||||| | || |||| | ||| | | || || ||
Sbjct 75517 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCCGATTACAAC 75458
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
||||||| ||||||||| | ||||| || |||
Sbjct 75457 ATCCAAAAAGAATCCACTTTGCATCTTGTTTTG 75425
Score = 109 bits (120), Expect = 6e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || ||||| || | || || ||||| || ||| | || || || ||
Sbjct 75865 ATGCAAATTTTCGTCAAAACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75806
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | || | ||| |||| ||||| ||||| || || || |||||||||||
Sbjct 75805 GACACCATCGATAACGTCAAGTCTAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAA 75746
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | |||||||||| |||||||| | || |||| | ||| | | || || ||
Sbjct 75745 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCCGATTACAAC 75686
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
||||||| ||||||||| | ||||| || |||
Sbjct 75685 ATCCAAAAAGAATCCACTTTGCATCTTGTTTTG 75653
>seq3
Length=1753957
Score = 131 bits (144), Expect = 2e-25
Identities = 252/367 (69%), Gaps = 6/367 (2%)
Strand=Plus/Plus
Query 81379 CCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCA 81438
||||| |||| |||||||| ||||| ||| || ||||| | ||| || |||||||||
Sbjct 695196 CCACCTTGGTCAACGTAACGAGCAGTGTTGTTGAAGACACGGATCATTGGAATGATACCA 695255
Query 81439 TCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGAT-TGA 81497
| || ||||| ||||| | || || || | | || | ||| || ||
Sbjct 695256 TTAGAAGTTCCGTTGGTACCAGCAATGTAAGAACCAGTAGAACGGATGTTGTGAATGTGC 695315
Query 81498 AAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAAT 81557
|| || || ||||| | |||||| ||| |||||| |||| ||| || |||||
Sbjct 695316 AAC-CCAATACCACCAGCAGTCTTTGAGATCATAGCACATTCCTTCAAGGTATCGTAAAT 695374
Query 81558 TCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTT 81617
|| |||||| ||| | |||||| ||| ||||||||| |||||| ||||| |
Sbjct 695375 ACCTTCGATGGAATCCTCTTTCATAGCAACCAAGAAACAAGATGACATTTGAGGA--TGA 695432
Query 81618 TGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGG 81675
||| || || ||||||| ||| || | ||||| ||||||| | | ||||| |||
Sbjct 695433 GGAGTACCAGCGTTGAACAATGTAGGAGAAGCGTGGGTGAAATATCTTTGAGACATTAGG 695492
Query 81676 TCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATA 81735
| || || || || ||| ||||||| |||||||||||| | ||| || | ||||
Sbjct 695493 TTGTAAGTCTCTAATACTCGTTCTATATCGTTACCGTGAATACCAACAGCCACTCTCATA 695552
Query 81736 AACATGT 81742
| |||||
Sbjct 695553 ATCATGT 695559
>seq4
Length=1715506
Score = 127 bits (140), Expect = 2e-24
Identities = 156/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || ||||| || | || || ||||| ||||| | || || || ||
Sbjct 1545371 ATGCAAATTTTCGTCAAAACCTTAACAGGTAAGACCATTACCTTGGAAGTCGAATCTTCC 1545430
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| ||| | ||| |||| || || |||||||| || ||||||||||||||
Sbjct 1545431 GACACCATTGACAATGTTAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAA 1545490
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | || ||||||||||||||| | || |||| | | || | | ||||| ||
Sbjct 1545491 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 1545550
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
||||||||||||||||| | || | ||||||
Sbjct 1545551 ATCCAAAAGGAATCCACTTTGCACTTGGTCTTG 1545583
>seq1
Length=1062590
Score = 116 bits (128), Expect = 4e-21
Identities = 139/189 (74%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474
|| |||||||| | || || ||||| || ||| | || || || || || | ||||
Sbjct 59728 TTCGTCAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCCGACACCATT 59787
Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534
| ||| | ||| |||| ||||| |||||||| || || || |||||||| || | |
Sbjct 59788 GACAATGTCAAGTCTAAGATTCAAGACAAGGAAGGTATCCCACCAGACCAACAAAGATTG 59847
Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594
|| ||||||||||||||| | || |||| | | ||| | | ||||| || ||||||||
Sbjct 59848 ATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACCTTGTCTGACTACAACATCCAAAAG 59907
Query 27595 GAATCCACT 27603
|||||||||
Sbjct 59908 GAATCCACT 59916
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570310350097840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |