Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20lactis_20[refseq_20GCF_5F000002515.2_202004-07-02] 7 sequences; 10,729,447 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq1 129 5e-25 seq5 127 2e-24 seq4 122 8e-23 >seq1 Length=1062590 Score = 129 bits (142), Expect = 5e-25 Identities = 161/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056 || || || || |||| || ||| | || ||| | ||||| ||| | |||||| | ||| Sbjct 59728 TTCGTCAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCCGACACCATT 59787 Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116 || | ||||| || ||||||||||| ||||| || ||||| || ||||| | || Sbjct 59788 GACAATGTCAAGTCTAAGATTCAAGACAAGGAAGGTATCCCACCAGACCAACAAAGATTG 59847 Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176 || | || || || ||||||||||| || ||| | || || |||||||| |||||| Sbjct 59848 ATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACCTTGTCTGACTACAACATCCAAAAG 59907 Query 27177 GAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || || || ||||||||| | ||| | ||||| || Sbjct 59908 GAATCCACTTTGCACTTGGTTTTGAGATTGAGAGGTGGTAT 59948 >seq5 Length=2234072 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || ||||| | ||||| ||| | || ||| | ||||| ||| | ||| Sbjct 75637 ATGCAAATTTTCGTCAAAACCTTAACCGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75578 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || ||||||||||||||||| || || || || ||| Sbjct 75577 GACACCATCGATAACGTCAAGTCTAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAA 75518 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | ||||| | || || || || |||||||| | ||| | |||||||||||| Sbjct 75517 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCCGATTACAAC 75458 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||| || || || || ||| | |||||| | || | ||||| || Sbjct 75457 ATCCAAAAAGAATCCACTTTGCATCTTGTTTTGAGATTAAGAGGTGGTAT 75408 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || ||||| |||| || ||| | || ||| | ||||| ||| | ||| Sbjct 75865 ATGCAAATTTTCGTCAAAACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75806 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || ||||||||||||||||| || || || || ||| Sbjct 75805 GACACCATCGATAACGTCAAGTCTAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAA 75746 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | ||||| | || || || || |||||||| | ||| | |||||||||||| Sbjct 75745 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCCGATTACAAC 75686 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||| || || || || ||| | |||||| | || | ||||| || Sbjct 75685 ATCCAAAAAGAATCCACTTTGCATCTTGTTTTGAGATTAAGAGGTGGTAT 75636 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || ||||| |||| || ||| | || ||| | ||||| ||| | ||| Sbjct 75181 ATGCAAATTTTCGTCAAAACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75122 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || ||||||||||||||||| || || || || ||| Sbjct 75121 GACACCATCGATAACGTCAAGTCTAAGATTCAAGACAAAGAAGGTATTCCTCCAGACCAA 75062 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | ||||| | || || || || |||||||| | ||| | || || || ||| Sbjct 75061 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTATAAC 75002 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || |||||||| || || |||||| | || ||| | || | |||||||| Sbjct 75001 ATCCAAAAGGAATCCACTTTACATCTTGTCTTGAGATTAAGAGGTGGCAT 74952 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || ||||| | ||||| ||| | || ||| | ||||| ||| | ||| Sbjct 75409 ATGCAAATTTTCGTCAAAACCTTAACCGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75350 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || ||||||||||||||||| || || || || ||| Sbjct 75349 GACACCATCGATAACGTCAAGTCTAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAA 75290 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | ||||| | || || || || |||||||| | ||| | || || || ||| Sbjct 75289 CAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTATAAC 75230 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || |||||||| || || |||||| | || ||| | || | ||||| || Sbjct 75229 ATCCAAAAGGAATCCACTTTACATCTTGTCTTGAGATTAAGAGGTGGTAT 75180 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || || || || ||| | || || ||| |||| ||| | ||||| ||| | || Sbjct 76094 CATGCAAATTTTCGTTAAGACTTTAACTGGTAAGACTATCACTTTGGAAGTTGAATCTTC 76035 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | || || | || ||| || ||||||||||||||||| || || || || || Sbjct 76034 TGACACCATCGATAACGTGAAATCGAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCA 75975 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | ||||| | || || || || |||||||| | ||| | || || || || Sbjct 75974 ACAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTATAA 75915 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| |||||||| || || |||||| | || ||| | || | ||||| || Sbjct 75914 CATCCAAAAGGAATCCACTTTACATCTTGTCTTGAGATTAAGAGGTGGTAT 75864 >seq4 Length=1715506 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26985 GCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCG 27044 |||||||| || || || ||||| | || || ||| | ||||| | ||||| ||| | Sbjct 1545368 GCCATGCAAATTTTCGTCAAAACCTTAACAGGTAAGACCATTACCTTGGAAGTCGAATCT 1545427 Query 27045 TCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGAT 27104 |||||| | ||||| | || || || || |||||||| ||||| || || || || Sbjct 1545428 TCCGACACCATTGACAATGTTAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGAC 1545487 Query 27105 CAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTAC 27164 ||||| | || || | || || || ||||||||||| || || | ||||| ||| Sbjct 1545488 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTAC 1545547 Query 27165 AACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||||| |||||||| || || || || ||||| ||| | ||| | ||||| Sbjct 1545548 AACATCCAAAAGGAATCCACTTTGCACTTGGTCTTGAGATTGAGAGGTGG 1545597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918361944640