Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20lactis_20[refseq_20GCF_5F000002515.2_202004-07-02] 7 sequences; 10,729,447 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq5 100 2e-16 seq4 87.8 1e-12 seq1 84.2 2e-11 >seq5 Length=2234072 Score = 100 bits (110), Expect = 2e-16 Identities = 94/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 |||||||||||| | || || || ||| | ||||||||||| || || || ||||| Sbjct 75544 GACAAAGAAGGTATCCCTCCAGACCAACAAAGATTAATTTTTGCAGGTAAGCAGTTGGAA 75485 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 || | | | ||||||||||||||||||||||||||| |||||||||| | |||||| Sbjct 75484 GATGGCAGAACCTTGTCCGATTACAACATCCAAAAAGAATCCACTTTGCATCTTGTTTTG 75425 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 10/218 (5%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||||||||| || ||||| | ||||| || || || | || |||||| || Sbjct 75865 ATGCAAATTTTCGTCAAAACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75806 Query 27850 GACGATGTACAATCG-----GTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904 ||| || |||| ||||| || || |||||||||||| | || | Sbjct 75805 GAC-----ACCATCGATAACGTCAAGTCTAAGATTCAAGACAAAGAAGGTATCCCTCCAG 75751 Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964 | || ||| | ||||||||||| || || || ||||| || | | | ||||||||||| Sbjct 75750 ACCAACAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCCGATT 75691 Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 |||||||||||||||| |||||||||| | |||||| Sbjct 75690 ACAACATCCAAAAAGAATCCACTTTGCATCTTGTTTTG 75653 >seq4 Length=1715506 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||||||||| || ||||| | || || || ||||| | || |||||| || Sbjct 1545371 ATGCAAATTTTCGTCAAAACCTTAACAGGTAAGACCATTACCTTGGAAGTCGAATCTTCC 1545430 Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| || ||||| || || || || ||||| |||||| |||| || | Sbjct 1545431 GACACCATTGACAAT--GTTAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACC 1545488 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 | ||| | || || ||||| || || |||||||| || | | | |||||||| |||| Sbjct 1545489 AACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACA 1545548 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 |||||||||| || ||||||||| ||||| ||| | ||| | || || Sbjct 1545549 ACATCCAAAAGGAATCCACTTTGCACTTGGTCTTGAGATTGAGAGGTGG 1545597 >seq1 Length=1062590 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||| |||||| | || || || ||| | || || ||||| || || |||||||| Sbjct 59812 GACAAGGAAGGTATCCCACCAGACCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAA 59871 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 || | | | |||||| || |||||||||||||| || ||||||||| ||||||||| Sbjct 59872 GATGGTAGAACCTTGTCTGACTACAACATCCAAAAGGAATCCACTTTGCACTTGGTTTTG 59931 Query 28003 CGTTTGCGTGGCGG 28016 | ||| | || || Sbjct 59932 AGATTGAGAGGTGG 59945 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355862369640489