Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20lactis_20[refseq_20GCF_5F000002515.2_202004-07-02]
7 sequences; 10,729,447 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq5 100 2e-16
seq4 87.8 1e-12
seq1 84.2 2e-11
>seq5
Length=2234072
Score = 100 bits (110), Expect = 2e-16
Identities = 94/120 (78%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942
|||||||||||| | || || || ||| | ||||||||||| || || || |||||
Sbjct 75544 GACAAAGAAGGTATCCCTCCAGACCAACAAAGATTAATTTTTGCAGGTAAGCAGTTGGAA 75485
Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002
|| | | | ||||||||||||||||||||||||||| |||||||||| | ||||||
Sbjct 75484 GATGGCAGAACCTTGTCCGATTACAACATCCAAAAAGAATCCACTTTGCATCTTGTTTTG 75425
Score = 100 bits (110), Expect = 2e-16
Identities = 153/218 (70%), Gaps = 10/218 (5%)
Strand=Plus/Minus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
||||||||||| || ||||| | ||||| || || || | || |||||| ||
Sbjct 75865 ATGCAAATTTTCGTCAAAACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCC 75806
Query 27850 GACGATGTACAATCG-----GTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904
||| || |||| ||||| || || |||||||||||| | || |
Sbjct 75805 GAC-----ACCATCGATAACGTCAAGTCTAAGATTCAAGACAAAGAAGGTATCCCTCCAG 75751
Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964
| || ||| | ||||||||||| || || || ||||| || | | | |||||||||||
Sbjct 75750 ACCAACAAAGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCCGATT 75691
Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002
|||||||||||||||| |||||||||| | ||||||
Sbjct 75690 ACAACATCCAAAAAGAATCCACTTTGCATCTTGTTTTG 75653
>seq4
Length=1715506
Score = 87.8 bits (96), Expect = 1e-12
Identities = 158/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
||||||||||| || ||||| | || || || ||||| | || |||||| ||
Sbjct 1545371 ATGCAAATTTTCGTCAAAACCTTAACAGGTAAGACCATTACCTTGGAAGTCGAATCTTCC 1545430
Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
||| || ||||| || || || || ||||| |||||| |||| || |
Sbjct 1545431 GACACCATTGACAAT--GTTAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACC 1545488
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
| ||| | || || ||||| || || |||||||| || | | | |||||||| ||||
Sbjct 1545489 AACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACA 1545548
Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|||||||||| || ||||||||| ||||| ||| | ||| | || ||
Sbjct 1545549 ACATCCAAAAGGAATCCACTTTGCACTTGGTCTTGAGATTGAGAGGTGG 1545597
>seq1
Length=1062590
Score = 84.2 bits (92), Expect = 2e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942
||||| |||||| | || || || ||| | || || ||||| || || ||||||||
Sbjct 59812 GACAAGGAAGGTATCCCACCAGACCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAA 59871
Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002
|| | | | |||||| || |||||||||||||| || ||||||||| |||||||||
Sbjct 59872 GATGGTAGAACCTTGTCTGACTACAACATCCAAAAGGAATCCACTTTGCACTTGGTTTTG 59931
Query 28003 CGTTTGCGTGGCGG 28016
| ||| | || ||
Sbjct 59932 AGATTGAGAGGTGG 59945
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355862369640489
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |