Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20lactis_20[refseq_20GCF_5F000002515.2_202004-07-02]
7 sequences; 10,729,447 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq6 242 3e-59
>seq6
Length=2602197
Score = 242 bits (268), Expect = 3e-59
Identities = 589/882 (67%), Gaps = 10/882 (1%)
Strand=Plus/Minus
Query 4248 ACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAAC 4307
|||||| |||||||| ||||| |||| ||||||||| || || || || || | ||
Sbjct 1394862 ACACCAGCCTTTTGGTAATCGGAGACTCTCTTTTCGAAAAAGTTGGTCTTACCAGCCAAG 1394803
Query 4308 GAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTT-TTCACACTTTAG 4366
|| ||||||||||| ||||| || || || || | ||| ||| ||| || || ||
Sbjct 1394802 GAGATATTTTCCATGAAATCGAATGGGTTGGTGACATTGAAATATTTCTTGTTACCCAAG 1394743
Query 4367 AGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAAT 4426
|| || | |||| ||| || |||||||| | || ||| |||| | || ||| ||
Sbjct 1394742 -GCGACCAATAATCTGTCGGCGACAAATTCCACGTATTGGTTCATTAAGTCTGCGTTCAT 1394684
Query 4427 TCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAA-CTCTTGTTCTATAGTTACGGCTT 4485
|| | || || ||||| || | | || | ||||| ||| || || ||||
Sbjct 1394683 ACCCAATAGAGAAACGGGTAGAGCATCCATGAAGTATCTCTT-TTCAATTTCGACAGCTT 1394625
Query 4486 CTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATA 4545
|||| || || | || | | ||| | ||||||||| || | |||| | ||
Sbjct 1394624 CTGTAATGATCTTTTCCACAATTTCTGGATTTGGTTTATTCTTCAAATGGGCAAAGAGTA 1394565
Query 4546 AACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTA 4605
||| ||||| || ||| | |||||| ||||| | |||| |||||||| || || |
Sbjct 1394564 GACAGGCAAAGTCTGTATGTAGACCTTCATCTCTACAGATCAACTCGTTAGAGAAAGTCA 1394505
Query 4606 ATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGA 4665
| || |||||||| || |||| || | ||| || ||||| ||||| || || || ||||
Sbjct 1394504 AACCAGGCATTAACCCCTTCTTCTTCAACCAGAAGATAGCAGCAAAGGAACCGGAGAAGA 1394445
Query 4666 ATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTT 4725
| | ||||| || || || || || || |||| || ||| || | | ||||
Sbjct 1394444 ACACACCTTCCACAGCAGCGAAAGCAACCAATCTTTCACCAAACAAGGCATCATCATCTT 1394385
Query 4726 TAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGT 4785
||||||| | | ||||| | ||| |||| |||| || || || | ||||| |
Sbjct 1394384 GAATCCATCTGATAGCCCATTCAGCCTTTTCTTTAATTTGTGGGATAGTTTCGATAGCAT 1394325
Query 4786 TAAATAATTTACTTT-TTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATAC 4844
| || || ||| |||| ||| || | |||||| || || || | | | |||
Sbjct 1394324 TGAACAAAA-ACTCACTTTCCTTTGGATCCTTAATATAGGTATCAATCAACAAGGAATAA 1394266
Query 4845 ATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTT 4904
| || ||||| ||||| || || ||| || || || || || ||| | ||||||| |
Sbjct 1394265 GTCTCTGAATGGATATTCTCCATCATAATTTGGAACCCATAGAAACATTTCGCTTCTGGT 1394206
Query 4905 ACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCT 4964
|||| ||||| | || | || || ||||||||||| || ||||| || |||
Sbjct 1394205 GCTTGCACTTCAGCTGAGAAGTTCTCCACCAAGTTTTCGTTAACGATACCATCCGAGGCA 1394146
Query 4965 GCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCG---TCAGGCTTAAGTTTTTTC 5021
|| || |||||||||| ||| ||||| || |||| ||| | | || |||
Sbjct 1394145 GCGAAGAACGCCAAAATTCTAGAGATAAAAAACCTTTCGTTCTCATTCATTCTGTTGTTC 1394086
Query 5022 CAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCT 5081
|| | | ||||||| || | ||||| | |||||| ||||||| || |||||||| ||
Sbjct 1394085 CAATCGTGCAAATCCTTGGACAAATCGATTTCTTCTGCAGTCCAGAAAGACGCTTCGGCC 1394026
Query 5082 TTTTTGTACATAGACCAAATATCAGGATAC-TGAATCGGAAG 5122
| || || |||||| ||| | ||| ||| | |||||
Sbjct 1394025 CTCTTATATGCTTCCCAAATCTCATGGTACTTGATTGGGAAG 1393984
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427049563567331
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |