Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20lactis_20[refseq_20GCF_5F000002515.2_202004-07-02] 7 sequences; 10,729,447 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq5 104 5e-17 seq1 95.1 3e-14 seq6 93.3 1e-13 seq4 87.8 4e-12 >seq5 Length=2234072 Score = 104 bits (114), Expect = 5e-17 Identities = 158/224 (71%), Gaps = 1/224 (0%) Strand=Plus/Plus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 |||||||| | ||| || |||||||||||||||||||||| || ||||| |||||||| Sbjct 75429 ACAAGATGCAAAGTGGATTCTTTTTGGATGTTGTAATCGGACAAGGTTCTGCCATCTTCC 75488 Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015 | || || || || || | || || ||||| | | ||| ||||| || |||||| Sbjct 75489 AACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTGTCTTGA 75548 Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075 || || ||||| | || | | |||| ||| || ||||| | ||| || || || Sbjct 75549 ATCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTTA 75608 Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118 || || | || || ||||| | ||||| ||| |||| ||| Sbjct 75609 CCGGTTAAGGTTTTGACGAAAATTTGCATACCACCTCTTAATCT 75652 Score = 104 bits (114), Expect = 5e-17 Identities = 158/224 (71%), Gaps = 1/224 (0%) Strand=Plus/Plus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 |||||||| | ||| || |||||||||||||||||||||| || ||||| |||||||| Sbjct 75657 ACAAGATGCAAAGTGGATTCTTTTTGGATGTTGTAATCGGACAAGGTTCTGCCATCTTCC 75716 Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015 | || || || || || | || || ||||| | | ||| ||||| || |||||| Sbjct 75717 AACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTGTCTTGA 75776 Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075 || || ||||| | || | | |||| ||| || ||||| | ||| || || || Sbjct 75777 ATCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTTA 75836 Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118 || || | || || ||||| | ||||| ||| |||| ||| Sbjct 75837 CCAGTCAAGGTTTTGACGAAAATTTGCATACCACCTCTTAATCT 75880 Score = 104 bits (114), Expect = 5e-17 Identities = 163/232 (70%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| | ||||||||| | ||| || || ||||||||||| || || | || ||||| || Sbjct 75878 TCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAGGTTCTGCC 75937 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 |||||| | || || || || || | || || ||||| | | ||| ||||| || Sbjct 75938 ATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTT 75997 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 |||||||| || ||| || | || | | |||| ||| || ||||| | ||| || Sbjct 75998 GTCTTGAATCTTCGATTTCACGTTATCGATGGTGTCAGAAGATTCAACTTCCAAAGTGAT 76057 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT-TTTACCCTTACTCTA 152119 ||| || || || | |||||| ||||| | ||||| ||| | ||| |||| Sbjct 76058 AGTCTTACCAGTTAAAGTCTTAACGAAAATTTGCATGTTTTCTCTTGATCTA 76109 Score = 89.7 bits (98), Expect = 1e-12 Identities = 159/231 (69%), Gaps = 1/231 (0%) Strand=Plus/Plus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| | ||||||||| | ||| || || ||||||||||| || || | || ||||| || Sbjct 75194 TCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAGGTTCTGCC 75253 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 |||||| | || || || || || | || || ||||| | | ||| ||||| || Sbjct 75254 ATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTT 75313 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 |||||||| || ||||| | || | | |||| ||| || ||||| | ||| || Sbjct 75314 GTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGAT 75373 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118 || || || || | || || ||||| | ||||| ||| |||| ||| Sbjct 75374 GGTCTTACCGGTTAAGGTTTTGACGAAAATTTGCATACCACCTCTTAATCT 75424 Score = 84.2 bits (92), Expect = 5e-11 Identities = 158/231 (68%), Gaps = 1/231 (0%) Strand=Plus/Plus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| | ||||||||| | ||| || || ||||||||||| || || | || ||||| || Sbjct 74966 TCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAGGTTCTGCC 75025 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 |||||| | || || || || || | || || ||||| | | || ||||| || Sbjct 75026 ATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGAATACCTTCTTT 75085 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 |||||||| || ||||| | || | | |||| ||| || ||||| | ||| || Sbjct 75086 GTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGAT 75145 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118 || || || || | || || ||||| | ||||| ||| |||| ||| Sbjct 75146 GGTCTTACCAGTCAAGGTTTTGACGAAAATTTGCATACCACCTCTTAATCT 75196 >seq1 Length=1062590 Score = 95.1 bits (104), Expect = 3e-14 Identities = 141/199 (71%), Gaps = 1/199 (1%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || | ||| || || |||||||||||||| || | || ||||| |||||||| | Sbjct 59925 CAAG-TGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCCA 59867 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || || ||||| | || || ||||| | | ||| |||||||| ||||||| Sbjct 59866 ATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGGATACCTTCCTTGTCTTGAA 59807 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || |||||| | || | | |||| ||| || ||||| | ||| || || || | Sbjct 59806 TCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTTAC 59747 Query 152077 CCGTGAGAGTCTTCACGAA 152095 | || | ||||| ||||| Sbjct 59746 CAGTCAAGGTCTTGACGAA 59728 >seq6 Length=2602197 Score = 93.3 bits (102), Expect = 1e-13 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 115611 ATGAGGGCAAGGGAGATTTTCTATGCCATTTGGACATCTGATCTTTTTATGAAGCGAGTC 115670 ||||||||||| || | || |||||| | |||| | ||||||| ||||||||||| || Sbjct 110165 ATGAGGGCAAGAGATTTGTTTTATGCCCTCTGGATACCTGATCTCTTTATGAAGCGGGTT 110224 Query 115671 AAGGCAAACGGAATGTGGAGCCTCTTTTGTCCCAATGAAGCCCCTGGTCTTGATGATGTT 115730 || || | | ||| | |||| || ||||||| ||||| || |||| | Sbjct 110225 GAGAATAATGAAGACTGGTCAATTTTTTCCCCAGATGAAGCACCTGGGCTAACTGATTGT 110284 Query 115731 TATGGTCCAGAGTTTGAGAATCTTTACGAAAGGTACGAGAAAGA 115774 |||||| || ||||| || ||||| ||||| ||||||||||| Sbjct 110285 TATGGTGATGAATTTGATAAGCTTTATGAAAGATACGAGAAAGA 110328 >seq4 Length=1715506 Score = 87.8 bits (96), Expect = 4e-12 Identities = 145/208 (70%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || | ||| || || |||||||||||||| |||| |||||||| |||||||| | Sbjct 1545577 CAAG-TGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCCA 1545519 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || || ||||| | || || ||||| | | || |||||||| ||||| | Sbjct 1545518 ATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGGA 1545459 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || || ||| | || | | |||| ||| || ||||| | ||||| || || | Sbjct 1545458 TCTTAGACTTAACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAATGGTCTTAC 1545399 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || | || || ||||| | ||||| Sbjct 1545398 CTGTTAAGGTTTTGACGAAAATTTGCAT 1545371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153820696516697