Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20lactis_20[refseq_20GCF_5F000002515.2_202004-07-02]
7 sequences; 10,729,447 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq5 104 5e-17
seq1 95.1 3e-14
seq6 93.3 1e-13
seq4 87.8 4e-12
>seq5
Length=2234072
Score = 104 bits (114), Expect = 5e-17
Identities = 158/224 (71%), Gaps = 1/224 (0%)
Strand=Plus/Plus
Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955
|||||||| | ||| || |||||||||||||||||||||| || ||||| ||||||||
Sbjct 75429 ACAAGATGCAAAGTGGATTCTTTTTGGATGTTGTAATCGGACAAGGTTCTGCCATCTTCC 75488
Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015
| || || || || || | || || ||||| | | ||| ||||| || ||||||
Sbjct 75489 AACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTGTCTTGA 75548
Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075
|| || ||||| | || | | |||| ||| || ||||| | ||| || || ||
Sbjct 75549 ATCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTTA 75608
Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118
|| || | || || ||||| | ||||| ||| |||| |||
Sbjct 75609 CCGGTTAAGGTTTTGACGAAAATTTGCATACCACCTCTTAATCT 75652
Score = 104 bits (114), Expect = 5e-17
Identities = 158/224 (71%), Gaps = 1/224 (0%)
Strand=Plus/Plus
Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955
|||||||| | ||| || |||||||||||||||||||||| || ||||| ||||||||
Sbjct 75657 ACAAGATGCAAAGTGGATTCTTTTTGGATGTTGTAATCGGACAAGGTTCTGCCATCTTCC 75716
Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015
| || || || || || | || || ||||| | | ||| ||||| || ||||||
Sbjct 75717 AACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTGTCTTGA 75776
Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075
|| || ||||| | || | | |||| ||| || ||||| | ||| || || ||
Sbjct 75777 ATCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTTA 75836
Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118
|| || | || || ||||| | ||||| ||| |||| |||
Sbjct 75837 CCAGTCAAGGTTTTGACGAAAATTTGCATACCACCTCTTAATCT 75880
Score = 104 bits (114), Expect = 5e-17
Identities = 163/232 (70%), Gaps = 1/232 (0%)
Strand=Plus/Plus
Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948
||| | ||||||||| | ||| || || ||||||||||| || || | || ||||| ||
Sbjct 75878 TCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAGGTTCTGCC 75937
Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008
|||||| | || || || || || | || || ||||| | | ||| ||||| ||
Sbjct 75938 ATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTT 75997
Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068
|||||||| || ||| || | || | | |||| ||| || ||||| | ||| ||
Sbjct 75998 GTCTTGAATCTTCGATTTCACGTTATCGATGGTGTCAGAAGATTCAACTTCCAAAGTGAT 76057
Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT-TTTACCCTTACTCTA 152119
||| || || || | |||||| ||||| | ||||| ||| | ||| ||||
Sbjct 76058 AGTCTTACCAGTTAAAGTCTTAACGAAAATTTGCATGTTTTCTCTTGATCTA 76109
Score = 89.7 bits (98), Expect = 1e-12
Identities = 159/231 (69%), Gaps = 1/231 (0%)
Strand=Plus/Plus
Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948
||| | ||||||||| | ||| || || ||||||||||| || || | || ||||| ||
Sbjct 75194 TCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAGGTTCTGCC 75253
Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008
|||||| | || || || || || | || || ||||| | | ||| ||||| ||
Sbjct 75254 ATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTT 75313
Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068
|||||||| || ||||| | || | | |||| ||| || ||||| | ||| ||
Sbjct 75314 GTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGAT 75373
Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118
|| || || || | || || ||||| | ||||| ||| |||| |||
Sbjct 75374 GGTCTTACCGGTTAAGGTTTTGACGAAAATTTGCATACCACCTCTTAATCT 75424
Score = 84.2 bits (92), Expect = 5e-11
Identities = 158/231 (68%), Gaps = 1/231 (0%)
Strand=Plus/Plus
Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948
||| | ||||||||| | ||| || || ||||||||||| || || | || ||||| ||
Sbjct 74966 TCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAGGTTCTGCC 75025
Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008
|||||| | || || || || || | || || ||||| | | || ||||| ||
Sbjct 75026 ATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGAATACCTTCTTT 75085
Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068
|||||||| || ||||| | || | | |||| ||| || ||||| | ||| ||
Sbjct 75086 GTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGAT 75145
Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118
|| || || || | || || ||||| | ||||| ||| |||| |||
Sbjct 75146 GGTCTTACCAGTCAAGGTTTTGACGAAAATTTGCATACCACCTCTTAATCT 75196
>seq1
Length=1062590
Score = 95.1 bits (104), Expect = 3e-14
Identities = 141/199 (71%), Gaps = 1/199 (1%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || | ||| || || |||||||||||||| || | || ||||| |||||||| |
Sbjct 59925 CAAG-TGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCCA 59867
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
|| || || ||||| | || || ||||| | | ||| |||||||| |||||||
Sbjct 59866 ATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGGATACCTTCCTTGTCTTGAA 59807
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || |||||| | || | | |||| ||| || ||||| | ||| || || || |
Sbjct 59806 TCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTTAC 59747
Query 152077 CCGTGAGAGTCTTCACGAA 152095
| || | ||||| |||||
Sbjct 59746 CAGTCAAGGTCTTGACGAA 59728
>seq6
Length=2602197
Score = 93.3 bits (102), Expect = 1e-13
Identities = 119/164 (73%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 115611 ATGAGGGCAAGGGAGATTTTCTATGCCATTTGGACATCTGATCTTTTTATGAAGCGAGTC 115670
||||||||||| || | || |||||| | |||| | ||||||| ||||||||||| ||
Sbjct 110165 ATGAGGGCAAGAGATTTGTTTTATGCCCTCTGGATACCTGATCTCTTTATGAAGCGGGTT 110224
Query 115671 AAGGCAAACGGAATGTGGAGCCTCTTTTGTCCCAATGAAGCCCCTGGTCTTGATGATGTT 115730
|| || | | ||| | |||| || ||||||| ||||| || |||| |
Sbjct 110225 GAGAATAATGAAGACTGGTCAATTTTTTCCCCAGATGAAGCACCTGGGCTAACTGATTGT 110284
Query 115731 TATGGTCCAGAGTTTGAGAATCTTTACGAAAGGTACGAGAAAGA 115774
|||||| || ||||| || ||||| ||||| |||||||||||
Sbjct 110285 TATGGTGATGAATTTGATAAGCTTTATGAAAGATACGAGAAAGA 110328
>seq4
Length=1715506
Score = 87.8 bits (96), Expect = 4e-12
Identities = 145/208 (70%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || | ||| || || |||||||||||||| |||| |||||||| |||||||| |
Sbjct 1545577 CAAG-TGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCCA 1545519
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
|| || || ||||| | || || ||||| | | || |||||||| ||||| |
Sbjct 1545518 ATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGGA 1545459
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || || ||| | || | | |||| ||| || ||||| | ||||| || || |
Sbjct 1545458 TCTTAGACTTAACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAATGGTCTTAC 1545399
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| || | || || ||||| | |||||
Sbjct 1545398 CTGTTAAGGTTTTGACGAAAATTTGCAT 1545371
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153820696516697
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |