Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20lactis_20[refseq_20GCF_5F000002515.2_202004-07-02]
7 sequences; 10,729,447 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq5 174 3e-38
seq1 158 3e-33
seq4 147 5e-30
seq3 86.0 1e-11
>seq5
Length=2234072
Score = 174 bits (192), Expect = 3e-38
Identities = 168/213 (79%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTC 282949
|| |||||||| ||| ||| ||||||||||| ||||||| |||| || | |||||| ||
Sbjct 75885 ACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAG-GTTCTGCCATCTTC 75943
Query 282950 TAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009
| || || || ||||| || || | ||||||||| || ||||| || ||||||||
Sbjct 75944 CAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTGTCTTG 76003
Query 283010 GATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069
||||| | ||| ||| ||||||| ||||| |||| ||| ||||| | |||||| |||||
Sbjct 76004 AATCTTCGATTTCACGTTATCGATGGTGTCAGAAGATTCAACTTCCAAAGTGATAGTCTT 76063
Query 283070 ACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
||| || |||||||||||||| || ||||| ||
Sbjct 76064 ACCAGTTAAAGTCTTAACGAAAATTTGCATGTT 76096
Score = 168 bits (186), Expect = 1e-36
Identities = 165/210 (79%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTC 282949
|| |||||||| ||| ||| ||||||||||| ||||||| |||| || | |||||| ||
Sbjct 74973 ACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAG-GTTCTGCCATCTTC 75031
Query 282950 TAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009
| || || || ||||| || || | ||||||||| |||||||| || ||||||||
Sbjct 75032 CAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGAATACCTTCTTTGTCTTG 75091
Query 283010 GATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069
||||| | || ||| ||||||| ||||| |||| ||||||||| | |||||| |||||
Sbjct 75092 AATCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTT 75151
Query 283070 ACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||| ||||| || || ||||| || |||||
Sbjct 75152 ACCAGTCAAGGTTTTGACGAAAATTTGCAT 75181
Score = 159 bits (176), Expect = 7e-34
Identities = 163/210 (78%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTC 282949
|| |||||||| ||| ||| ||||||||||| ||||||| |||| || | |||||| ||
Sbjct 75201 ACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCAGACAAG-GTTCTGCCATCTTC 75259
Query 282950 TAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009
| || || || ||||| || || | ||||||||| || ||||| || ||||||||
Sbjct 75260 CAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTGTCTTG 75319
Query 283010 GATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069
||||| | || ||| ||||||| ||||| |||| ||||||||| | |||||| |||||
Sbjct 75320 AATCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTT 75379
Query 283070 ACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||| || || || || ||||| || |||||
Sbjct 75380 ACCGGTTAAGGTTTTGACGAAAATTTGCAT 75409
Score = 159 bits (176), Expect = 7e-34
Identities = 163/210 (78%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTC 282949
|| ||||| || ||| |||||||||||||||||| || | |||| || | |||||| ||
Sbjct 75657 ACAAGATGCAAAGTGGATTCTTTTTGGATGTTGTAATCGGACAAG-GTTCTGCCATCTTC 75715
Query 282950 TAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009
| || || || ||||| || || | ||||||||| || ||||| || ||||||||
Sbjct 75716 CAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTGTCTTG 75775
Query 283010 GATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069
||||| | || ||| ||||||| ||||| |||| ||||||||| | |||||| |||||
Sbjct 75776 AATCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTT 75835
Query 283070 ACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||| ||||| || || ||||| || |||||
Sbjct 75836 ACCAGTCAAGGTTTTGACGAAAATTTGCAT 75865
Score = 156 bits (172), Expect = 9e-33
Identities = 162/210 (77%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTC 282949
|| ||||| || ||| |||||||||||||||||| || | |||| || | |||||| ||
Sbjct 75429 ACAAGATGCAAAGTGGATTCTTTTTGGATGTTGTAATCGGACAAG-GTTCTGCCATCTTC 75487
Query 282950 TAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009
| || || || ||||| || || | ||||||||| || ||||| || ||||||||
Sbjct 75488 CAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGGAGGGATACCTTCTTTGTCTTG 75547
Query 283010 GATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069
||||| | || ||| ||||||| ||||| |||| ||||||||| | |||||| |||||
Sbjct 75548 AATCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTT 75607
Query 283070 ACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||| || || || || ||||| || |||||
Sbjct 75608 ACCGGTTAAGGTTTTGACGAAAATTTGCAT 75637
>seq1
Length=1062590
Score = 158 bits (174), Expect = 3e-33
Identities = 157/201 (78%), Gaps = 2/201 (1%)
Strand=Plus/Minus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTC 282949
|||| || || ||| ||| ||||||||||||||||||| |||| || | ||||| ||
Sbjct 59927 ACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAG-GTTCTACCATCTTC 59869
Query 282950 TAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009
| ||| || || ||||||||||| | ||||||||| || ||||| |||||||||||
Sbjct 59868 CAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGGATACCTTCCTTGTCTTG 59809
Query 283010 GATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069
||||| | || || | || || ||||| |||| ||||||||| | |||||| |||||
Sbjct 59808 AATCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTT 59749
Query 283070 ACCCGTCAAAGTCTTAACGAA 283090
||| ||||| ||||| |||||
Sbjct 59748 ACCAGTCAAGGTCTTGACGAA 59728
>seq4
Length=1715506
Score = 147 bits (162), Expect = 5e-30
Identities = 158/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| || || ||| ||| ||||||||||||||||| | | || | ||||| ||
Sbjct 1545579 ACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCC 1545520
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| ||| || || ||||||||||| | ||||||||| |||||||| ||||||||||||
Sbjct 1545519 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGG 1545460
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
||||| | || || | || || ||||| |||| ||||||||| | || || ||||||
Sbjct 1545459 ATCTTAGACTTAACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAATGGTCTTA 1545400
Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || || || || ||||| || |||||
Sbjct 1545399 CCTGTTAAGGTTTTGACGAAAATTTGCAT 1545371
>seq3
Length=1753957
Score = 86.0 bits (94), Expect = 1e-11
Identities = 347/539 (64%), Gaps = 6/539 (1%)
Strand=Plus/Minus
Query 273526 TGTACCACGGCTTCATG-GCTACCATAGGTTCACCCTTCATCAGTCGCTCCACATTACCA 273584
||||||| ||| ||| ||| |||| || ||||||||||| |||| |||||||
Sbjct 1187153 TGTACCATGGCGCCATCTGCT-CCATTTCCTCTCCCTTCATCAGACGCTTCACATTATTG 1187095
Query 273585 ATAATATCTTTAGGGTTGTAACTCGGAACGTTCGTAGACCAACCGGTGCCAATACCGGAA 273644
| |||||| | || ||| || |||| || ||| |||||| || |||||||| |
Sbjct 1187094 ACAATATCCATTGGATTGAAAGGAGGAATATTAGTACTCCAACCCGTACCAATACCTTCA 1187035
Query 273645 GAACCATTCACCAGAATACTCGGGATAATTGGGACATAATATTCGGGCTCAATTTTATCA 273704
| |||||| || | || | || |||| || | ||| |||| || || | | |
Sbjct 1187034 GTACCATTTACTAAAACCATTGGAATAACCGGTAAATACCATTCAGGTTCTACAGTCTGT 1186975
Query 273705 CCATCGTCGTAAAGGTACTTCAACAAAGCATCATCCGTATCAACGAAAACCTTTCGCGTC 273764
|||| || | || || ||||| || | ||| || | | ||||| |||| |||
Sbjct 1186974 TCATCATCTTGAATATAATTCAATAATGGATCGTCGAGAGTATTGAAAATTTTTCTCGTA 1186915
Query 273765 TGAGGATTCAGTTTCGTGAAAATGTA-CCTGGCACTCGCATGGTCCTTGCCACCTTGCAG 273823
| || || | |||||| || || | |||| | ||| || || ||||| || |
Sbjct 1186914 AGTTTGTTTAGCTCCGTGAAGATATATCTTGGCGC-AGCAGAATCTTTACCACC-TGTTG 1186857
Query 273824 C-CTCGAACCAAACTGACCCTCGGGCAGTAGCCAGTTTATGTTGTTGCTACCGACGTAAT 273882
| || | ||| || ||| | || | | ||| || || ||| ||| || |||
Sbjct 1186856 CTCTTGTACCGAAGGCACCATTTGGTTTCAACAAGTAAATATTATTGGAACCAACAAAAT 1186797
Query 273883 CCTGAGCCATATTCACGATAGTCCCCTGAAGGGATACCTCGCCGTGGTGATAGGCGCTGT 273942
||||||| | | || ||||| | | ||| || || || ||||| | | |
Sbjct 1186796 CCTGAGCTAGACCGACAATAGTTTGATACAAAGATTGTTCACCATGATGATACCCTGTAT 1186737
Query 273943 GTTCGGCGATATAACCACTGAACTGAGCAACCTTCACATCGCTCGTCAAGTTTCGCTTGA 274002
|||| | | |||||||| || ||||| ||||| | || || |||| || || ||||
Sbjct 1186736 GTTCTGAAACATAACCACCTAATTGAGCGACCTTGATTTCACTTTTCAAATTACGTTTGA 1186677
Query 274003 ATGCGGAATACAACACCTTCCGCTGCGAGGGCTTGAACCCATCAACGACCGATGGAATA 274061
| || ||| | || |||| ||| || || || ||||| | || || ||||||
Sbjct 1186676 AGCAGGCATAGATAACTTTCCTCTGACCAGGTTTCAAACCATCTAAAACAGAGGGAATA 1186618
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046739106120578
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