Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20lactis_20[refseq_20GCF_5F000002515.2_202004-07-02] 7 sequences; 10,729,447 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq4 129 4e-25 seq5 111 1e-19 seq1 107 1e-18 >seq4 Length=1715506 Score = 129 bits (142), Expect = 4e-25 Identities = 170/232 (73%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || ||||||| |||||| |||| ||| | ||| ||||||||||||||||| |||| Sbjct 1545597 CCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGAC 1545538 Query 44171 A--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 | ||| | | || |||| ||||| || ||||||||||| | || || |||| || Sbjct 1545537 AAAGTT--CTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAG 1545480 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTC 44286 | | ||||||||| || ||||| ||| || ||| | |||||||||| ||||| Sbjct 1545479 GAATACCTTCCTTGTCTTGGATCTTAGACTTAACATTGT--CAATGGTGTCGGAAGATTC 1545422 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || |||| ||||| ||||| || || | ||| || ||||| ||||||||| Sbjct 1545421 GACTTCCAAGGTAATGGTCTTACCTGTTAAGGTTTTGACGAAAATTTGCATG 1545370 >seq5 Length=2234072 Score = 111 bits (122), Expect = 1e-19 Identities = 167/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||| | |||||| || || || | ||| || |||||||||||||| Sbjct 75404 TTGCATACCACCTCTTAATCTCAAAACAAGATGCAAAGTGGATTCTTTTTGGATGTTGTA 75463 Query 44164 ATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222 ||||| | || | || | || |||| |||||| || ||||| || || | || || | Sbjct 75464 ATCGGACAAGGTTCTGC-CATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGT 75522 Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGG 44282 ||| ||| | |||||| || || ||||| ||| | | | |||||||||| | Sbjct 75523 CTGGAGGGATACCTTCTTTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCGGAAG 75582 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| || |||| || || ||||| || || | ||| || ||||| |||||||| Sbjct 75583 ATTCGACTTCCAAAGTGATGGTCTTACCGGTTAAGGTTTTGACGAAAATTTGCAT 75637 Score = 111 bits (122), Expect = 1e-19 Identities = 167/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||| | |||||| || || || | ||| || |||||||||||||| Sbjct 75632 TTGCATACCACCTCTTAATCTCAAAACAAGATGCAAAGTGGATTCTTTTTGGATGTTGTA 75691 Query 44164 ATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222 ||||| | || | || | || |||| |||||| || ||||| || || | || || | Sbjct 75692 ATCGGACAAGGTTCTGC-CATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGT 75750 Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGG 44282 ||| ||| | |||||| || || ||||| ||| | | | |||||||||| | Sbjct 75751 CTGGAGGGATACCTTCTTTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCGGAAG 75810 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| || |||| || || ||||| || || | ||| || ||||| |||||||| Sbjct 75811 ATTCGACTTCCAAAGTGATGGTCTTACCAGTCAAGGTTTTGACGAAAATTTGCAT 75865 Score = 104 bits (114), Expect = 2e-17 Identities = 166/236 (70%), Gaps = 2/236 (1%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||| | |||||| || || || | ||| |||||||||||||| || Sbjct 75860 TTGCATACCACCTCTTAATCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATA 75919 Query 44164 ATC-GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222 || | | || | || | || |||| |||||| || ||||| || || | || || | Sbjct 75920 GTCAGACAAGGTTCTGC-CATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGT 75978 Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGG 44282 ||| ||| | |||||| || || |||||| |||| | | |||||||| | | Sbjct 75979 CTGGAGGGATACCTTCTTTGTCTTGAATCTTCGATTTCACGTTATCGATGGTGTCAGAAG 76038 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||| || |||| || || ||||| || || | ||||| ||||| ||||||||| Sbjct 76039 ATTCAACTTCCAAAGTGATAGTCTTACCAGTTAAAGTCTTAACGAAAATTTGCATG 76094 Score = 102 bits (112), Expect = 6e-17 Identities = 165/235 (70%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||| | |||||| || || || | ||| |||||||||||||| || Sbjct 75176 TTGCATACCACCTCTTAATCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATA 75235 Query 44164 ATC-GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222 || | | || | || | || |||| |||||| || ||||| || || | || || | Sbjct 75236 GTCAGACAAGGTTCTGC-CATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGT 75294 Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGG 44282 ||| ||| | |||||| || || ||||| ||| | | | |||||||||| | Sbjct 75295 CTGGAGGGATACCTTCTTTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCGGAAG 75354 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| || |||| || || ||||| || || | ||| || ||||| |||||||| Sbjct 75355 ATTCGACTTCCAAAGTGATGGTCTTACCGGTTAAGGTTTTGACGAAAATTTGCAT 75409 Score = 98.7 bits (108), Expect = 7e-16 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC- 44166 || || ||||| | |||||| || || || | ||| |||||||||||||| || || Sbjct 74952 ATGCCACCTCTTAATCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCA 75011 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | | || | || | || |||| |||||| || ||||| || || | || || |||| Sbjct 75012 GACAAGGTTCTGC-CATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGG 75070 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 ||| | |||||| || || ||||| ||| | | | |||||||||| ||||| Sbjct 75071 AGGAATACCTTCTTTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTC 75130 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || |||| || || ||||| || || | ||| || ||||| |||||||| Sbjct 75131 GACTTCCAAAGTGATGGTCTTACCAGTCAAGGTTTTGACGAAAATTTGCAT 75181 >seq1 Length=1062590 Score = 107 bits (118), Expect = 1e-18 Identities = 161/224 (72%), Gaps = 6/224 (3%) Strand=Plus/Minus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167 || || ||||||| |||||| |||| ||| | ||| ||||||||||||||||| || Sbjct 59948 ATACCACCTCTCAATCTCAAAACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCA 59889 Query 44168 G-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | | || | | | || |||| ||||| || ||||||||||| | || || |||| Sbjct 59888 GACAAGGTTCTAC-CATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGG 59830 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGAT 44284 || | ||||||||| || ||||| ||| || ||| | |||||||||| ||| Sbjct 59829 TGGGATACCTTCCTTGTCTTGAATCTTAGACTTGACATTGT--CAATGGTGTCGGAAGAT 59772 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAA 44328 || || |||| || || ||||| || || | |||||| ||||| Sbjct 59771 TCGACTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGACGAA 59728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990369288319