Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20lactis_20[refseq_20GCF_5F000002515.2_202004-07-02]
7 sequences; 10,729,447 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq4 129 4e-25
seq5 111 1e-19
seq1 107 1e-18
>seq4
Length=1715506
Score = 129 bits (142), Expect = 4e-25
Identities = 170/232 (73%), Gaps = 8/232 (3%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| ||||||| |||||| |||| ||| | ||| ||||||||||||||||| ||||
Sbjct 1545597 CCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGAC 1545538
Query 44171 A--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228
| ||| | | || |||| ||||| || ||||||||||| | || || |||| ||
Sbjct 1545537 AAAGTT--CTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAG 1545480
Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTC 44286
| | ||||||||| || ||||| ||| || ||| | |||||||||| |||||
Sbjct 1545479 GAATACCTTCCTTGTCTTGGATCTTAGACTTAACATTGT--CAATGGTGTCGGAAGATTC 1545422
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|| |||| ||||| ||||| || || | ||| || ||||| |||||||||
Sbjct 1545421 GACTTCCAAGGTAATGGTCTTACCTGTTAAGGTTTTGACGAAAATTTGCATG 1545370
>seq5
Length=2234072
Score = 111 bits (122), Expect = 1e-19
Identities = 167/235 (71%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || ||||| | |||||| || || || | ||| || ||||||||||||||
Sbjct 75404 TTGCATACCACCTCTTAATCTCAAAACAAGATGCAAAGTGGATTCTTTTTGGATGTTGTA 75463
Query 44164 ATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222
||||| | || | || | || |||| |||||| || ||||| || || | || || |
Sbjct 75464 ATCGGACAAGGTTCTGC-CATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGT 75522
Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGG 44282
||| ||| | |||||| || || ||||| ||| | | | |||||||||| |
Sbjct 75523 CTGGAGGGATACCTTCTTTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCGGAAG 75582
Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||| || |||| || || ||||| || || | ||| || ||||| ||||||||
Sbjct 75583 ATTCGACTTCCAAAGTGATGGTCTTACCGGTTAAGGTTTTGACGAAAATTTGCAT 75637
Score = 111 bits (122), Expect = 1e-19
Identities = 167/235 (71%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || ||||| | |||||| || || || | ||| || ||||||||||||||
Sbjct 75632 TTGCATACCACCTCTTAATCTCAAAACAAGATGCAAAGTGGATTCTTTTTGGATGTTGTA 75691
Query 44164 ATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222
||||| | || | || | || |||| |||||| || ||||| || || | || || |
Sbjct 75692 ATCGGACAAGGTTCTGC-CATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGT 75750
Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGG 44282
||| ||| | |||||| || || ||||| ||| | | | |||||||||| |
Sbjct 75751 CTGGAGGGATACCTTCTTTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCGGAAG 75810
Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||| || |||| || || ||||| || || | ||| || ||||| ||||||||
Sbjct 75811 ATTCGACTTCCAAAGTGATGGTCTTACCAGTCAAGGTTTTGACGAAAATTTGCAT 75865
Score = 104 bits (114), Expect = 2e-17
Identities = 166/236 (70%), Gaps = 2/236 (1%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || ||||| | |||||| || || || | ||| |||||||||||||| ||
Sbjct 75860 TTGCATACCACCTCTTAATCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATA 75919
Query 44164 ATC-GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222
|| | | || | || | || |||| |||||| || ||||| || || | || || |
Sbjct 75920 GTCAGACAAGGTTCTGC-CATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGT 75978
Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGG 44282
||| ||| | |||||| || || |||||| |||| | | |||||||| | |
Sbjct 75979 CTGGAGGGATACCTTCTTTGTCTTGAATCTTCGATTTCACGTTATCGATGGTGTCAGAAG 76038
Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|||| || |||| || || ||||| || || | ||||| ||||| |||||||||
Sbjct 76039 ATTCAACTTCCAAAGTGATAGTCTTACCAGTTAAAGTCTTAACGAAAATTTGCATG 76094
Score = 102 bits (112), Expect = 6e-17
Identities = 165/235 (70%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || ||||| | |||||| || || || | ||| |||||||||||||| ||
Sbjct 75176 TTGCATACCACCTCTTAATCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATA 75235
Query 44164 ATC-GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222
|| | | || | || | || |||| |||||| || ||||| || || | || || |
Sbjct 75236 GTCAGACAAGGTTCTGC-CATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGT 75294
Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGG 44282
||| ||| | |||||| || || ||||| ||| | | | |||||||||| |
Sbjct 75295 CTGGAGGGATACCTTCTTTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCGGAAG 75354
Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||| || |||| || || ||||| || || | ||| || ||||| ||||||||
Sbjct 75355 ATTCGACTTCCAAAGTGATGGTCTTACCGGTTAAGGTTTTGACGAAAATTTGCAT 75409
Score = 98.7 bits (108), Expect = 7e-16
Identities = 162/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC- 44166
|| || ||||| | |||||| || || || | ||| |||||||||||||| || ||
Sbjct 74952 ATGCCACCTCTTAATCTCAAGACAAGATGTAAAGTGGATTCCTTTTGGATGTTATAGTCA 75011
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| | || | || | || |||| |||||| || ||||| || || | || || ||||
Sbjct 75012 GACAAGGTTCTGC-CATCTTCCAACTGCTTACCTGCAAAAATTAATCTTTGTTGGTCTGG 75070
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
||| | |||||| || || ||||| ||| | | | |||||||||| |||||
Sbjct 75071 AGGAATACCTTCTTTGTCTTGAATCTTAGACTTGACGTTATCGATGGTGTCGGAAGATTC 75130
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| |||| || || ||||| || || | ||| || ||||| ||||||||
Sbjct 75131 GACTTCCAAAGTGATGGTCTTACCAGTCAAGGTTTTGACGAAAATTTGCAT 75181
>seq1
Length=1062590
Score = 107 bits (118), Expect = 1e-18
Identities = 161/224 (72%), Gaps = 6/224 (3%)
Strand=Plus/Minus
Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167
|| || ||||||| |||||| |||| ||| | ||| ||||||||||||||||| ||
Sbjct 59948 ATACCACCTCTCAATCTCAAAACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCA 59889
Query 44168 G-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| | || | | | || |||| ||||| || ||||||||||| | || || ||||
Sbjct 59888 GACAAGGTTCTAC-CATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGG 59830
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGAT 44284
|| | ||||||||| || ||||| ||| || ||| | |||||||||| |||
Sbjct 59829 TGGGATACCTTCCTTGTCTTGAATCTTAGACTTGACATTGT--CAATGGTGTCGGAAGAT 59772
Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAA 44328
|| || |||| || || ||||| || || | |||||| |||||
Sbjct 59771 TCGACTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGACGAA 59728
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359990369288319
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |