Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20lactis_20[refseq_20GCF_5F000002515.2_202004-07-02]
7 sequences; 10,729,447 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq5 178 3e-39
seq4 129 1e-24
>seq5
Length=2234072
Score = 178 bits (196), Expect = 3e-39
Identities = 173/220 (79%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| ||||| | || || || || ||||| | || || ||| || |||
Sbjct 75634 CAAATTTTCGTCAAAACCTTAACCGGTAAGACCATCACTTTGGAAGTCGAATCTTCCGAC 75575
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| |||||||| ||||||||||| |||||||| ||||| |||
Sbjct 75574 ACCATCGATAACGTCAAGTCTAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAACAA 75515
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102
|| | || || || || || ||| | |||||||| || || |||| ||||||| ||| |
Sbjct 75514 AGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAAC-CTTGTCCGATTACAACAT 75456
Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|||||||||||| || ||||||||||||||||| | |||
Sbjct 75455 CCAAAAAGAATCCACTTTGCATCTTGTTTTGAGATTAAGA 75416
Score = 178 bits (196), Expect = 3e-39
Identities = 173/220 (79%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| ||||| | || || || || ||||| | || || ||| || |||
Sbjct 75862 CAAATTTTCGTCAAAACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCCGAC 75803
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| |||||||| ||||||||||| |||||||| ||||| |||
Sbjct 75802 ACCATCGATAACGTCAAGTCTAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAACAA 75743
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102
|| | || || || || || ||| | |||||||| || || |||| ||||||| ||| |
Sbjct 75742 AGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAAC-CTTGTCCGATTACAACAT 75684
Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|||||||||||| || ||||||||||||||||| | |||
Sbjct 75683 CCAAAAAGAATCCACTTTGCATCTTGTTTTGAGATTAAGA 75644
Score = 159 bits (176), Expect = 8e-34
Identities = 169/220 (77%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| ||||| | || || || || ||||| | || || ||| || |||
Sbjct 75406 CAAATTTTCGTCAAAACCTTAACCGGTAAGACCATCACTTTGGAAGTCGAATCTTCCGAC 75347
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| |||||||| ||||||||||| |||||||| ||||| |||
Sbjct 75346 ACCATCGATAACGTCAAGTCTAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAACAA 75287
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102
|| | || || || || || ||| | |||||||| || || |||| | || |||||| |
Sbjct 75286 AGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAAC-CTTGTCTGACTATAACAT 75228
Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|||||| ||||| || | |||||||| |||||| | |||
Sbjct 75227 CCAAAAGGAATCCACTTTACATCTTGTCTTGAGATTAAGA 75188
Score = 159 bits (176), Expect = 8e-34
Identities = 169/220 (77%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || ||| | || || || || ||||| | || || ||| || |||
Sbjct 76090 CAAATTTTCGTTAAGACTTTAACTGGTAAGACTATCACTTTGGAAGTTGAATCTTCTGAC 76031
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| ||||| ||| |||||||| ||||||||||| |||||||| ||||| |||
Sbjct 76030 ACCATCGATAACGTGAAATCGAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAACAA 75971
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102
|| | || || || || || ||| | |||||||| || || |||| | || |||||| |
Sbjct 75970 AGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAAC-CTTGTCTGACTATAACAT 75912
Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|||||| ||||| || | |||||||| |||||| | |||
Sbjct 75911 CCAAAAGGAATCCACTTTACATCTTGTCTTGAGATTAAGA 75872
Score = 156 bits (172), Expect = 1e-32
Identities = 168/220 (76%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| ||||| | || || || || ||||| | || || ||| || |||
Sbjct 75178 CAAATTTTCGTCAAAACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCCGAC 75119
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| |||||||| ||||||||||| || ||||| ||||| |||
Sbjct 75118 ACCATCGATAACGTCAAGTCTAAGATTCAAGACAAAGAAGGTATTCCTCCAGACCAACAA 75059
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102
|| | || || || || || ||| | |||||||| || || |||| | || |||||| |
Sbjct 75058 AGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAAC-CTTGTCTGACTATAACAT 75000
Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|||||| ||||| || | |||||||| |||||| | |||
Sbjct 74999 CCAAAAGGAATCCACTTTACATCTTGTCTTGAGATTAAGA 74960
>seq4
Length=1715506
Score = 129 bits (142), Expect = 1e-24
Identities = 160/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| ||||| | ||||| || || || ||| | || || ||| || |||
Sbjct 1545374 CAAATTTTCGTCAAAACCTTAACAGGTAAGACCATTACCTTGGAAGTCGAATCTTCCGAC 1545433
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || || || ||||| || ||||| ||||| || ||||| ||||| |||
Sbjct 1545434 ACCATTGACAATGTTAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAACAA 1545493
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||| || || || || | |||||||| || ||| | |||| || ||| ||
Sbjct 1545494 AGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAACATC 1545553
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||| ||||| || |||| | || |||||| | |||
Sbjct 1545554 CAAAAGGAATCCACTTTGCACTTGGTCTTGAGATTGAGA 1545592
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203731092040358
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |