Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20lactis_20[refseq_20GCF_5F000002515.2_202004-07-02] 7 sequences; 10,729,447 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq5 178 3e-39 seq4 129 1e-24 >seq5 Length=2234072 Score = 178 bits (196), Expect = 3e-39 Identities = 173/220 (79%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| ||||| | || || || || ||||| | || || ||| || ||| Sbjct 75634 CAAATTTTCGTCAAAACCTTAACCGGTAAGACCATCACTTTGGAAGTCGAATCTTCCGAC 75575 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| |||||||| ||||||||||| |||||||| ||||| ||| Sbjct 75574 ACCATCGATAACGTCAAGTCTAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAACAA 75515 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || | || || || || || ||| | |||||||| || || |||| ||||||| ||| | Sbjct 75514 AGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAAC-CTTGTCCGATTACAACAT 75456 Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||||||||||| || ||||||||||||||||| | ||| Sbjct 75455 CCAAAAAGAATCCACTTTGCATCTTGTTTTGAGATTAAGA 75416 Score = 178 bits (196), Expect = 3e-39 Identities = 173/220 (79%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| ||||| | || || || || ||||| | || || ||| || ||| Sbjct 75862 CAAATTTTCGTCAAAACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCCGAC 75803 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| |||||||| ||||||||||| |||||||| ||||| ||| Sbjct 75802 ACCATCGATAACGTCAAGTCTAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAACAA 75743 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || | || || || || || ||| | |||||||| || || |||| ||||||| ||| | Sbjct 75742 AGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAAC-CTTGTCCGATTACAACAT 75684 Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||||||||||| || ||||||||||||||||| | ||| Sbjct 75683 CCAAAAAGAATCCACTTTGCATCTTGTTTTGAGATTAAGA 75644 Score = 159 bits (176), Expect = 8e-34 Identities = 169/220 (77%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| ||||| | || || || || ||||| | || || ||| || ||| Sbjct 75406 CAAATTTTCGTCAAAACCTTAACCGGTAAGACCATCACTTTGGAAGTCGAATCTTCCGAC 75347 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| |||||||| ||||||||||| |||||||| ||||| ||| Sbjct 75346 ACCATCGATAACGTCAAGTCTAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAACAA 75287 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || | || || || || || ||| | |||||||| || || |||| | || |||||| | Sbjct 75286 AGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAAC-CTTGTCTGACTATAACAT 75228 Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||||| ||||| || | |||||||| |||||| | ||| Sbjct 75227 CCAAAAGGAATCCACTTTACATCTTGTCTTGAGATTAAGA 75188 Score = 159 bits (176), Expect = 8e-34 Identities = 169/220 (77%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || ||| | || || || || ||||| | || || ||| || ||| Sbjct 76090 CAAATTTTCGTTAAGACTTTAACTGGTAAGACTATCACTTTGGAAGTTGAATCTTCTGAC 76031 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| ||| |||||||| ||||||||||| |||||||| ||||| ||| Sbjct 76030 ACCATCGATAACGTGAAATCGAAGATTCAAGACAAAGAAGGTATCCCTCCAGACCAACAA 75971 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || | || || || || || ||| | |||||||| || || |||| | || |||||| | Sbjct 75970 AGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAAC-CTTGTCTGACTATAACAT 75912 Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||||| ||||| || | |||||||| |||||| | ||| Sbjct 75911 CCAAAAGGAATCCACTTTACATCTTGTCTTGAGATTAAGA 75872 Score = 156 bits (172), Expect = 1e-32 Identities = 168/220 (76%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| ||||| | || || || || ||||| | || || ||| || ||| Sbjct 75178 CAAATTTTCGTCAAAACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCCGAC 75119 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| |||||||| ||||||||||| || ||||| ||||| ||| Sbjct 75118 ACCATCGATAACGTCAAGTCTAAGATTCAAGACAAAGAAGGTATTCCTCCAGACCAACAA 75059 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || | || || || || || ||| | |||||||| || || |||| | || |||||| | Sbjct 75058 AGATTAATTTTTGCAGGTAAGCAGTTGGAAGATGGCAGAAC-CTTGTCTGACTATAACAT 75000 Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||||| ||||| || | |||||||| |||||| | ||| Sbjct 74999 CCAAAAGGAATCCACTTTACATCTTGTCTTGAGATTAAGA 74960 >seq4 Length=1715506 Score = 129 bits (142), Expect = 1e-24 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| ||||| | ||||| || || || ||| | || || ||| || ||| Sbjct 1545374 CAAATTTTCGTCAAAACCTTAACAGGTAAGACCATTACCTTGGAAGTCGAATCTTCCGAC 1545433 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || || ||||| || ||||| ||||| || ||||| ||||| ||| Sbjct 1545434 ACCATTGACAATGTTAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAACAA 1545493 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || || || || | |||||||| || ||| | |||| || ||| || Sbjct 1545494 AGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAACATC 1545553 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||||| ||||| || |||| | || |||||| | ||| Sbjct 1545554 CAAAAGGAATCCACTTTGCACTTGGTCTTGAGATTGAGA 1545592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203731092040358