Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F000747785.1_202014-06-
30] 36 sequences; 11,165,408 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq2 242 4e-59
seq32 179 4e-40
seq27 152 6e-32
>seq2
Length=945054
Score = 242 bits (268), Expect = 4e-59
Identities = 584/882 (66%), Gaps = 4/882 (0%)
Strand=Plus/Plus
Query 53781 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 53840
||||||| || || || || | |||||||||||| |||||||| |||||||| || || |
Sbjct 340669 ACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCCTTGTATAGCA 340728
Query 53841 TGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCT 53900
||||||| ||||||||||| | || | ||| | || || | ||| | ||||||
Sbjct 340729 TGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACAACTTTTGAGCCT 340788
Query 53901 TTATTATAGATTTGTATCTCTT--TTCTCTTTCGTATAGTGTATACAATCGTTCAAACTC 53958
| | | ||| || | | |||||| ||||| || |||||| |||||| ||
Sbjct 340789 TGACAGTC--TTTCTACCACGGCCTTCTCTCTCGTAACGTTCGTACAATGCTTCAAATTC 340846
Query 53959 GTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCC 54018
|| || |||||| || || || ||| | ||| | | ||| | ||| ||| |
Sbjct 340847 ATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGAGAGAACAAAGTCCAATCTTC 340906
Query 54019 GTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCT 54078
|| | || |||| ||||| || ||||| || ||||| || ||| || | |||||
Sbjct 340907 GTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCTCT 340966
Query 54079 GGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGA 54138
| | ||| || || || |||||| | | |||| ||| | | ||||| ||
Sbjct 340967 TGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATATCTGA 341026
Query 54139 ATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTAT 54198
||||| || || | ||| | || | | ||||| | ||||| || || || || |
Sbjct 341027 GTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAAC 341086
Query 54199 GTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATT 54258
||| | || ||||| || |||| | | ||||||||||||||| || || | ||| ||
Sbjct 341087 GTAACGGGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGTT 341146
Query 54259 GGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCC 54318
|| || | || || || | | |||||| || ||| | ||| || || ||
Sbjct 341147 AGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACC 341206
Query 54319 TGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATC 54378
|| | |||||||| | || ||| || || || || || || || || || |||
Sbjct 341207 AGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAATC 341266
Query 54379 ATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAA 54438
||| ||||| | ||| ||||| |||||||| || || ||| || ||||| ||
Sbjct 341267 TTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAA 341326
Query 54439 TAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGC 54498
| ||||| |||||||| || || || || ||| | ||| ||||| || || | | |
Sbjct 341327 AAGTGTAGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCCAAAAC 341386
Query 54499 TGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCT 54558
|| ||||| | || || || || || || | ||| | |||||| ||||| |
Sbjct 341387 CTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGACG 341446
Query 54559 TTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 54618
|||| | | ||| ||| ||| | |||||||| || |||||| || || ||||| ||
Sbjct 341447 TTCAGCAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGAA 341506
Query 54619 ATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTT 54660
|||||| || || |||| ||||| | ||| | |||||
Sbjct 341507 GTAGTTGAATTGGAAATCTCTGTCGTAGACAATCGCAGAGTT 341548
>seq32
Length=1561830
Score = 179 bits (198), Expect = 4e-40
Identities = 580/886 (65%), Gaps = 22/886 (2%)
Strand=Plus/Minus
Query 23844 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 23903
|||||||| || ||| | |||||||| ||||| |||||||| | || || || |||
Sbjct 411929 TTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTT 411870
Query 23904 TCCATGAAATCGGATGGATTGGTAACATTATAGA--TTCTTTTAAATCCCAATTCAGAAA 23961
||||| || ||| |||| || || || || ||| ||||| | | || || || |
Sbjct 411869 TCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTA--CCTAAAGCAACCA 411812
Query 23962 TCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAA 24021
| ||| ||||| ||||| || | ||| ||||||| ||| ||||| || | |
Sbjct 411811 GTAGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATA 411752
Query 24022 GTTTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATA 24080
| ||| || ||||| | | ||| | |||| ||| || || || ||||| ||
Sbjct 411751 GAGAAACGGGTAGAGCGTCGATGAAGTATCTCTT-TTCGATCTCAACAGCTTCTGTGATG 411693
Query 24081 ATAGATCTT---ACTGTTTCTTCA-CTCGGTGGATACAATAAATGTTTAAACATCAAACA 24136
|| |||| || | | | | || | | | | | ||||| | || | ||||||
Sbjct 411692 AT---TCTTTCGACAATCTTTGGATCTGGCTTGTT-CTTCAAATGATGGAATAGCAAACA 411637
Query 24137 TGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCC 24196
|| || ||| ||| | ||| || ||||| | ||| |||||||| || || || | ||
Sbjct 411636 GGCAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACC 411577
Query 24197 GGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAAT 24256
||||| | || ||| || | ||| || |||| ||||| || ||||| || || |
Sbjct 411576 TGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCAAAGGAACCAGAGAAAAACAC 411517
Query 24257 TCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGCTGTCAT---GTAT 24313
||||| || || || || |||| | |||||| | || ||| ||||| | ||
Sbjct 411516 ACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGCGTATAGGGCTTCGTCATCACGAAT 411457
Query 24314 CCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAA 24372
||| || || ||||| | ||||| | ||| | || || || || || ||||| |
Sbjct 411456 CCATCTAATG-GCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCA 411398
Query 24373 AGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTT 24432
| | ||| | ||| ||| ||| || | || || |||||||| | ||| |||
Sbjct 411397 ACAAGAAGTCGTGTTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAGTTT 411338
Query 24433 CCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCT 24492
| || ||||||||||| || ||||| || ||||||||||| | || || | ||| |
Sbjct 411337 CGGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAATTT 411278
Query 24493 GTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAA 24552
| || || | | || ||| | || ||||| ||||| || || || || ||||
Sbjct 411277 GCACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAA 411218
Query 24553 AAAACGCCAATACATGTTTTATAAAATATTTTTCG-TCTGGT--GTTAGTTTATTCCAAT 24609
| ||||| | || || ||| || | ||| ||| || || || ||||| |
Sbjct 411217 AGAACGCAAGCACTCTGGAGATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTCCAGT 411158
Query 24610 CATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTT 24669
||| | ||| || || | ||| | |||||| | |||||||| || ||||| || | |
Sbjct 411157 CATGAAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTCTCT 411098
Query 24670 TATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 24715
|||| | |||||| || || || | ||||| |||| |||||
Sbjct 411097 TATAAGCCTCCCAGATTTCGTGGTACTTGATTGGGAAAAGCACAAA 411052
>seq27
Length=1195410
Score = 152 bits (168), Expect = 6e-32
Identities = 207/287 (72%), Gaps = 4/287 (1%)
Strand=Plus/Minus
Query 53989 TTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATC 54048
|||||| |||| | | ||||| ||| | | || | || |||| |||||| |||||
Sbjct 100498 TTCATCTGGACTAAAAATGGACCAATCTTCATTATTTTCAACACGTTGCATAAAAAGATC 100439
Query 54049 AGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTT 54108
|||||||| ||||| ||||| |||| || || ||| || ||||| ||||||
Sbjct 100438 CGGAATCCATAGAGCATAAAATAAGTCTCGGGCCCTCATTTCTTCTTTTCCGTGATTCTT 100379
Query 54109 TTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAA- 54167
| | || | | ||| | |||||||| |||||| |||||||||||||| || ||
Sbjct 100378 TCTTAGTTGTAAGAAGTCAATAATATCCCCATGCCATGGTTCCAAGTATAT--ACAAAAG 100321
Query 54168 -CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTC 54226
| ||||| |||||||| || || ||||| | ||||| || ||||| ||| |||| | |
Sbjct 100320 GCACCAGGGCGTTTGTTCCCACCTTGATCGACATATCTTGCTGTGTTGTTAAAAACCCGC 100261
Query 54227 AACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATA 54273
| ||| |||| | |||||| || | |||||| | ||| ||||||||
Sbjct 100260 AGCATAGGAACTAAACCATTTGAAGTACCATTCGACCCTGAGATATA 100214
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593721332825280
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