Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F000747785.1_202014-06-
30] 36 sequences; 11,165,408 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq33 105 5e-18
seq19 104 2e-17
seq32 82.4 6e-11
>seq33
Length=1695378
Score = 105 bits (116), Expect = 5e-18
Identities = 162/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCG--T 45167
|||||||||||||| || || ||||| || || ||||| ||||||||||||||| |
Sbjct 914166 CCACCTCTCAATCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCGGAT 914107
Query 45168 TCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227
|||| | |||| || | |||||| || || || ||||| | |||||||| ||||
Sbjct 914106 AGAGTT--CTTCCGTCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAG 914049
Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287
| | ||| |||||||| ||| || ||| || | | |||| | || |
Sbjct 914048 GAATACCTTCCTTGTCTTGAATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCAA 913989
Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
| |||| || || || ||||| |||| |||||| || |||||||||||
Sbjct 913988 CTTCCAAAGTGATGGTTTTGCCTGTCAAAGTCTTGACGAAGATTTGCAT 913940
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCG--T 45167
|||||||||||||| || || ||||| || || ||||| ||||||||||||||| |
Sbjct 914394 CCACCTCTCAATCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCGGAT 914335
Query 45168 TCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227
|||| | |||| || | |||||| || || || ||||| | |||||||| ||||
Sbjct 914334 AGAGTT--CTTCCGTCTTCTAATTGTTTACCCGCAAAAATCAATCTTTGTTGGTCTGGAG 914277
Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287
| | ||| || || || ||| || ||| || | | |||| | || |
Sbjct 914276 GAATACCTTCTTTATCTTGAATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCGA 914217
Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
| |||| || || ||||| || |||| |||||| || |||||||||||
Sbjct 914216 CTTCCAAAGTGATAGTCTTACCTGTCAAAGTCTTGACGAAGATTTGCAT 914168
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCG--T 45167
|||||||||||||| || || ||||| || || ||||| ||||||||||||||| |
Sbjct 914622 CCACCTCTCAATCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCGGAT 914563
Query 45168 TCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227
|||| | |||| || | |||||| || || || ||||| | |||||||| ||||
Sbjct 914562 AGAGTT--CTTCCGTCTTCTAATTGTTTACCCGCAAAAATCAATCTTTGTTGGTCTGGAG 914505
Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287
| | ||| || || || ||| || ||| || | | |||| | || |
Sbjct 914504 GAATACCTTCTTTATCTTGAATCTTAGACTTCACATTATCAATAGTGTCAGAAGATTCGA 914445
Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
| |||| || || ||||| || |||| |||||| || |||||||||||
Sbjct 914444 CTTCCAAAGTGATAGTCTTACCTGTCAAAGTCTTGACGAAGATTTGCAT 914396
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCG--T 45167
|| |||||||| || || |||||||| || ||| ||||| || |||||||||||| |
Sbjct 914850 CCTCCTCTCAACCTCAAGACCAAGTGGAGTGTGGATTCCTTTTGGATGTTGTAGTCGGAT 914791
Query 45168 TCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227
|||| | |||| || | ||| || || || || ||||| | |||||||| ||||
Sbjct 914790 AGAGTT--CTTCCGTCTTCTAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAG 914733
Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287
| | ||| |||||||| ||| || ||| || | | |||| | || |
Sbjct 914732 GAATACCTTCCTTGTCTTGAATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCGA 914673
Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
| |||| || || ||||| || |||| |||||| || |||||||||||
Sbjct 914672 CTTCCAAAGTGATAGTCTTACCTGTCAAAGTCTTGACGAAGATTTGCAT 914624
>seq19
Length=169523
Score = 104 bits (114), Expect = 2e-17
Identities = 162/230 (70%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|||||||||||||| || |||||||| || || ||||| || ||||||||||| |
Sbjct 25850 CCACCTCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCAGAC 25791
Query 45170 --AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227
|||| | | | || |||| ||| || || || || ||||| | |||||||| ||||
Sbjct 25790 AAAGTT--CTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAG 25733
Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287
| | ||| |||||||| || || ||| || | | | |||| | || |
Sbjct 25732 GAATACCTTCCTTGTCTTGGATCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGA 25673
Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
| |||| |||||| ||||| || || || ||||| || || |||||||||
Sbjct 25672 CTTCCAAGGTAATAGTCTTACCAGTTAGGGTCTTGACGAAAATTTGCATG 25623
>seq32
Length=1561830
Score = 82.4 bits (90), Expect = 6e-11
Identities = 101/136 (74%), Gaps = 4/136 (3%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|||||||| | ||| || |||||||| || ||| ||||| || ||||||||||| |
Sbjct 1514999 CCACCTCTTAGTCTCAAGACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGAC 1515058
Query 45170 --AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227
|||| | | |||| |||| ||| || || || || ||||| | |||||||| || |
Sbjct 1515059 AAAGTT--CTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTG 1515116
Query 45228 GCACACCCTCCTTGTC 45243
| | ||| ||||||||
Sbjct 1515117 GAATACCTTCCTTGTC 1515132
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395075026660756
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |