Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F000747785.1_202014-06-
30] 36 sequences; 11,165,408 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq33 107 1e-18
seq32 102 6e-17
seq19 93.3 3e-14
>seq33
Length=1695378
Score = 107 bits (118), Expect = 1e-18
Identities = 146/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 18122 GTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTG 18181
||||||||| ||||| ||||||||||||||||||| | ||| | | ||||| |||||
Sbjct 914143 GTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCTAATTG 914084
Query 18182 TTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTG 18241
||| || ||| | || | ||||||||| || || | |||||||| || ||| |
Sbjct 914083 TTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAATCTT 914024
Query 18242 TTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGT 18301
||| || | ||| ||||||| | || ||| | |||||| ||||||| ||
Sbjct 914023 AGACTTCACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTTTTGCCTGT 913964
Query 18302 CAATGTTTTTACAAAAATTTGCAT 18325
||| || || || || ||||||||
Sbjct 913963 CAAAGTCTTGACGAAGATTTGCAT 913940
Score = 105 bits (116), Expect = 5e-18
Identities = 153/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 18122 GTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTG 18181
||||||||| ||||| ||||| ||||||||||||| | ||| | | ||||| |||||
Sbjct 913915 GTGAAGTGTAGATTCCTTTTGGATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCTAATTG 913856
Query 18182 TTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTG 18241
|| |||||| | || | ||||||||| || || | ||||||||||| || |
Sbjct 913855 CTTACCCGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTATCTTGGATCTT 913796
Query 18242 TTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGT 18301
||| || | ||| ||||||| | || ||| | |||||| | || || ||
Sbjct 913795 AGACTTCACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCTGT 913736
Query 18302 CAATGTTTTTACAAAAATTTGCATTTTTAAACTCTT 18337
|| || || ||||| |||||||||||||| ||||
Sbjct 913735 TAACGTCTTGACAAAGATTTGCATTTTTAATGTCTT 913700
Score = 102 bits (112), Expect = 6e-17
Identities = 145/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 18122 GTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTG 18181
||||||||| ||||| ||||||||||||||||||| | ||| | | ||||| |||||
Sbjct 914371 GTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCTAATTG 914312
Query 18182 TTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTG 18241
||| |||||| | || | ||||||||| || || | ||||| ||||| ||| |
Sbjct 914311 TTTACCCGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCTTTATCTTGAATCTT 914252
Query 18242 TTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGT 18301
||| || | ||| ||||||| | ||| ||| | ||||| | || || ||
Sbjct 914251 AGACTTCACATTGTCAATAGTGTCAGAAGATTCGACTTCCAAAGTGATAGTCTTACCTGT 914192
Query 18302 CAATGTTTTTACAAAAATTTGCAT 18325
||| || || || || ||||||||
Sbjct 914191 CAAAGTCTTGACGAAGATTTGCAT 914168
Score = 102 bits (112), Expect = 6e-17
Identities = 145/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 18122 GTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTG 18181
||||||||| ||||| ||||||||||||||||||| | ||| | | ||||| |||||
Sbjct 914599 GTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCTAATTG 914540
Query 18182 TTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTG 18241
||| |||||| | || | ||||||||| || || | ||||| ||||| ||| |
Sbjct 914539 TTTACCCGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCTTTATCTTGAATCTT 914480
Query 18242 TTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGT 18301
||| || | ||| ||||||| | ||| ||| | ||||| | || || ||
Sbjct 914479 AGACTTCACATTATCAATAGTGTCAGAAGATTCGACTTCCAAAGTGATAGTCTTACCTGT 914420
Query 18302 CAATGTTTTTACAAAAATTTGCAT 18325
||| || || || || ||||||||
Sbjct 914419 CAAAGTCTTGACGAAGATTTGCAT 914396
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| ||| ||||| ||||| ||||| ||||||||||||| | ||| | | |||||
Sbjct 914832 ACCAAGTGGAGTGTGGATTCCTTTTGGATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCT 914773
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
||||| || || ||| | || | ||||||||| || || | |||||||| || |
Sbjct 914772 AATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGA 914713
Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296
|| | ||| || | ||| ||||||| | ||| ||| | ||||| | ||
Sbjct 914712 ATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCGACTTCCAAAGTGATAGTCTTA 914653
Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|| ||||| || || || || ||||||||
Sbjct 914652 CCTGTCAAAGTCTTGACGAAGATTTGCAT 914624
>seq32
Length=1561830
Score = 102 bits (112), Expect = 6e-17
Identities = 154/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158
|| || | |||||| | |||| |||||| || ||||| ||||| ||||||||||| | |
Sbjct 1514999 CCACCTCTTAGTCTCAAGACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGAC 1515058
Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218
| ||| ||| ||||||||||| || || ||| |||| | ||||||||| || ||
Sbjct 1515059 AAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGA 1515118
Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278
| |||||||| || ||| | |||||| | ||| |||||| | ||| |
Sbjct 1515119 ATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCGACT 1515178
Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAA 18317
|| | |||||| | || || ||||| || || || |||
Sbjct 1515179 TCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGACGAAA 1515217
>seq19
Length=169523
Score = 93.3 bits (102), Expect = 3e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| |||||| || ||||| ||||| ||||||||||| | || ||| ||| |||||||
Sbjct 25832 ACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCTTCC 25773
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
||||| || || ||| |||| | ||||||||| || || | |||||||| ||
Sbjct 25772 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGG 25713
Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296
|| | |||||| | ||| ||||| | ||| ||| | ||| || | ||
Sbjct 25712 ATCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAATAGTCTTA 25653
Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|| || | || || || |||||||||||
Sbjct 25652 CCAGTTAGGGTCTTGACGAAAATTTGCAT 25624
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379343833562820
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |