Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F000747785.1_202014-06- 30] 36 sequences; 11,165,408 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq33 107 1e-18 seq32 102 6e-17 seq19 93.3 3e-14 >seq33 Length=1695378 Score = 107 bits (118), Expect = 1e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 18122 GTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTG 18181 ||||||||| ||||| ||||||||||||||||||| | ||| | | ||||| ||||| Sbjct 914143 GTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCTAATTG 914084 Query 18182 TTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTG 18241 ||| || ||| | || | ||||||||| || || | |||||||| || ||| | Sbjct 914083 TTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAATCTT 914024 Query 18242 TTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGT 18301 ||| || | ||| ||||||| | || ||| | |||||| ||||||| || Sbjct 914023 AGACTTCACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTTTTGCCTGT 913964 Query 18302 CAATGTTTTTACAAAAATTTGCAT 18325 ||| || || || || |||||||| Sbjct 913963 CAAAGTCTTGACGAAGATTTGCAT 913940 Score = 105 bits (116), Expect = 5e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 18122 GTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTG 18181 ||||||||| ||||| ||||| ||||||||||||| | ||| | | ||||| ||||| Sbjct 913915 GTGAAGTGTAGATTCCTTTTGGATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCTAATTG 913856 Query 18182 TTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTG 18241 || |||||| | || | ||||||||| || || | ||||||||||| || | Sbjct 913855 CTTACCCGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTATCTTGGATCTT 913796 Query 18242 TTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGT 18301 ||| || | ||| ||||||| | || ||| | |||||| | || || || Sbjct 913795 AGACTTCACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCTGT 913736 Query 18302 CAATGTTTTTACAAAAATTTGCATTTTTAAACTCTT 18337 || || || ||||| |||||||||||||| |||| Sbjct 913735 TAACGTCTTGACAAAGATTTGCATTTTTAATGTCTT 913700 Score = 102 bits (112), Expect = 6e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 18122 GTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTG 18181 ||||||||| ||||| ||||||||||||||||||| | ||| | | ||||| ||||| Sbjct 914371 GTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCTAATTG 914312 Query 18182 TTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTG 18241 ||| |||||| | || | ||||||||| || || | ||||| ||||| ||| | Sbjct 914311 TTTACCCGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCTTTATCTTGAATCTT 914252 Query 18242 TTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGT 18301 ||| || | ||| ||||||| | ||| ||| | ||||| | || || || Sbjct 914251 AGACTTCACATTGTCAATAGTGTCAGAAGATTCGACTTCCAAAGTGATAGTCTTACCTGT 914192 Query 18302 CAATGTTTTTACAAAAATTTGCAT 18325 ||| || || || || |||||||| Sbjct 914191 CAAAGTCTTGACGAAGATTTGCAT 914168 Score = 102 bits (112), Expect = 6e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 18122 GTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTG 18181 ||||||||| ||||| ||||||||||||||||||| | ||| | | ||||| ||||| Sbjct 914599 GTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCTAATTG 914540 Query 18182 TTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTG 18241 ||| |||||| | || | ||||||||| || || | ||||| ||||| ||| | Sbjct 914539 TTTACCCGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCTTTATCTTGAATCTT 914480 Query 18242 TTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGT 18301 ||| || | ||| ||||||| | ||| ||| | ||||| | || || || Sbjct 914479 AGACTTCACATTATCAATAGTGTCAGAAGATTCGACTTCCAAAGTGATAGTCTTACCTGT 914420 Query 18302 CAATGTTTTTACAAAAATTTGCAT 18325 ||| || || || || |||||||| Sbjct 914419 CAAAGTCTTGACGAAGATTTGCAT 914396 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| ||| ||||| ||||| ||||| ||||||||||||| | ||| | | ||||| Sbjct 914832 ACCAAGTGGAGTGTGGATTCCTTTTGGATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCT 914773 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 ||||| || || ||| | || | ||||||||| || || | |||||||| || | Sbjct 914772 AATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGA 914713 Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296 || | ||| || | ||| ||||||| | ||| ||| | ||||| | || Sbjct 914712 ATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCGACTTCCAAAGTGATAGTCTTA 914653 Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || ||||| || || || || |||||||| Sbjct 914652 CCTGTCAAAGTCTTGACGAAGATTTGCAT 914624 >seq32 Length=1561830 Score = 102 bits (112), Expect = 6e-17 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || | |||||| | |||| |||||| || ||||| ||||| ||||||||||| | | Sbjct 1514999 CCACCTCTTAGTCTCAAGACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGAC 1515058 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | ||| ||| ||||||||||| || || ||| |||| | ||||||||| || || Sbjct 1515059 AAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGA 1515118 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | |||||||| || ||| | |||||| | ||| |||||| | ||| | Sbjct 1515119 ATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCGACT 1515178 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAA 18317 || | |||||| | || || ||||| || || || ||| Sbjct 1515179 TCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGACGAAA 1515217 >seq19 Length=169523 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| |||||| || ||||| ||||| ||||||||||| | || ||| ||| ||||||| Sbjct 25832 ACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCTTCC 25773 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 ||||| || || ||| |||| | ||||||||| || || | |||||||| || Sbjct 25772 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGG 25713 Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296 || | |||||| | ||| ||||| | ||| ||| | ||| || | || Sbjct 25712 ATCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAATAGTCTTA 25653 Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || || | || || || ||||||||||| Sbjct 25652 CCAGTTAGGGTCTTGACGAAAATTTGCAT 25624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379343833562820