Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F000747785.1_202014-06-
30] 36 sequences; 11,165,408 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq2 232 6e-56
seq33 111 1e-19
seq27 105 6e-18
seq19 98.7 9e-16
seq32 84.2 2e-11
>seq2
Length=945054
Score = 232 bits (256), Expect = 6e-56
Identities = 713/1087 (66%), Gaps = 22/1087 (2%)
Strand=Plus/Plus
Query 23097 ACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCA 23156
|||| || || ||||| || | || || || || || || | ||||||||| ||||
Sbjct 340669 ACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCCTTGTATAGCA 340728
Query 23157 TGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGT 23216
|| | || || || || ||| || | || | ||| || ||||| | ||||| |
Sbjct 340729 TGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACAACTTTTGAGCCT 340788
Query 23217 GAACACGTCGCACGTACCT--GCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTC 23274
||| ||| | |||| ||||||| |||||| || |||||| || ||||||||
Sbjct 340789 TGACA-GTCTTTC-TACCACGGCCTTCTCTCTCGTAACGTTCGTACAATGCTTCAAATTC 340846
Query 23275 GGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGA 23334
|||||||| || | | ||| || | || | ||| | | | | |||| |
Sbjct 340847 ATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGAGAGAACAAAGTCCAATCTTC 340906
Query 23335 GTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCG 23394
|| || || || | |||| |||||||| || |||||||| || ||||| || |
Sbjct 340907 GTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCTCT 340966
Query 23395 GGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGC 23454
|| || | || || || ||| ||||||| | | || | ||||| || | || |
Sbjct 340967 TGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATATCTGA 341026
Query 23455 ATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGAC 23514
||||| ||||||| ||| | ||| || || || |||||||| || || || || || ||
Sbjct 341027 GTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAAC 341086
Query 23515 GTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCC 23574
||||||||| ||||||||| | || | | ||| || | | |||||| || | |||
Sbjct 341087 GTAACGGGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGTT 341146
Query 23575 TACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCC 23634
|| || | ||||| | | |||| |||||||| ||| ||||| || || ||
Sbjct 341147 AGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACC 341206
Query 23635 GCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTC 23694
| | || || ||||| || |||| |||| ||||||||| || || || ||| ||
Sbjct 341207 AGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAATC 341266
Query 23695 CTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAA 23754
|| || | || || | |||||| || |||||||| | | || ||| | || |||
Sbjct 341267 TTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAA 341326
Query 23755 CAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGC 23814
||||| || ||||| || ||||||| |||||||| ||||| || || | |
Sbjct 341327 AAGTGTAGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCCAAAAC 341386
Query 23815 GGCATCAATGTCCTCT-CCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTC 23873
||||| | |||| ||||| ||||||| || || | ||| ||||||| |||||| |
Sbjct 341387 CTTTTCAATAT-CTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGAC 341445
Query 23874 --TCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCC 23931
|| | | | | ||||| ||| | | || || ||||||| || || || || ||
Sbjct 341446 GTTCAGCAACCTTA--CCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACC 341503
Query 23932 AAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAAACGGTACGCATT 23991
|| |||| | | || || | |||| || || || || |||||| ||| | ||
Sbjct 341504 GAAGTAGTTGAATTGGAAATCTCTGTCGTAGACAATCGCAGAGTTCAAA--GTA-TCTTT 341560
Query 23992 GGCAGCGATGATGTTGTAATGAA---AATTCGATATCATCGGCGTTTTAACGCCGGTCTT 24048
| | |||| | ||| || | || ||| ||||| |||| | || || |||||
Sbjct 341561 GTTCTCCATGACGATGTCATACACCTCATCCGAAATCATAGGCGAGTGAATACCAGTCTT 341620
Query 24049 TGGATCGATCGCTTCATACATATCGATAATGACAT-CGAAAAAAGAATCTTTAGTCTCCT 24107
||| | || | | |||| || | || | |||||| | || | || | ||
Sbjct 341621 TGGGTTGACCCATCTGTACAAGTCTTCGACCACTTGCGAAAACTGCTTC-GTGGTTTGCT 341679
Query 24108 TGTGCAAATTAGACACGGCCAATCTAGCCGC--AAGCAACGAATAGTCGGAATGATCGAT 24165
||||||| ||||| | ||| | |||||| || ||| | || || || | ||| | |
Sbjct 341680 TGTGCAAGTTAGAAATGGCAATTCTAGCGGCCAAAGTAGCG--TAATCTGGGTGAATGGT 341737
Query 24166 GGTCATG 24172
|||||||
Sbjct 341738 GGTCATG 341744
>seq33
Length=1695378
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| ||||| |||||| ||||||||||||| ||||| | || |||||| | ||
Sbjct 913940 ATGCAAATCTTCGTCAAGACTTTGACAGGCAAAACCATCACTTTGGAAGTTGAATCTTCT 913999
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | | || | || || | || ||||||||||| | || || |||||
Sbjct 914000 GACACTATTGACAATGTGAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 914059
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| | | || || ||||| ||||| || |||||| | ||| | ||| || |||
Sbjct 914060 CAAAGATTGATTTTTGCTGGTAAACAATTAGAAGACGGAAGAACTCTATCCGACTACAAC 914119
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|||||||| ||||| || ||||| | || | ||| |||| || ||||
Sbjct 914120 ATTCAAAAGGAATCTACACTTCACTTAGTCTTGAGATTGAGAGGTGGTA 914168
Score = 84.2 bits (92), Expect = 2e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| ||||| |||||| ||||||| || || ||||| | || || ||| | ||
Sbjct 914168 ATGCAAATCTTCGTCAAGACTTTGACAGGTAAGACTATCACTTTGGAAGTCGAATCTTCT 914227
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | | || | || || | || || || ||||| | || || |||||
Sbjct 914228 GACACTATTGACAATGTGAAGTCTAAGATTCAAGATAAAGAAGGTATTCCTCCAGACCAA 914287
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| | | || || || || ||||| || |||||| | ||| | ||| || |||
Sbjct 914288 CAAAGATTGATTTTTGCGGGTAAACAATTAGAAGACGGAAGAACTCTATCCGACTACAAC 914347
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|||||||| ||||| || ||||| | || | ||| |||| || ||||
Sbjct 914348 ATTCAAAAGGAATCTACACTTCACTTAGTCTTGAGATTGAGAGGTGGTA 914396
Score = 84.2 bits (92), Expect = 2e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| ||||| |||||| ||||||| || || ||||| | || || ||| | ||
Sbjct 914396 ATGCAAATCTTCGTCAAGACTTTGACAGGTAAGACTATCACTTTGGAAGTCGAATCTTCT 914455
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | | || | || || | || || || ||||| | || || |||||
Sbjct 914456 GACACTATTGATAATGTGAAGTCTAAGATTCAAGATAAAGAAGGTATTCCTCCAGACCAA 914515
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| | | || || || || ||||| || |||||| | ||| | ||| || |||
Sbjct 914516 CAAAGATTGATTTTTGCGGGTAAACAATTAGAAGACGGAAGAACTCTATCCGACTACAAC 914575
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|||||||| ||||| || ||||| | || | ||| |||| || ||||
Sbjct 914576 ATTCAAAAGGAATCTACACTTCACTTAGTCTTGAGATTGAGAGGTGGTA 914624
Score = 82.4 bits (90), Expect = 7e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| ||||| |||||| ||||||| || || ||||| | || || ||| | ||
Sbjct 914624 ATGCAAATCTTCGTCAAGACTTTGACAGGTAAGACTATCACTTTGGAAGTCGAATCTTCT 914683
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | | || | || || | || ||||||||||| | || || |||||
Sbjct 914684 GACACTATTGACAATGTGAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 914743
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| | | || || ||||| || || || |||||| | ||| | ||| || |||
Sbjct 914744 CAAAGATTGATTTTTGCTGGTAAGCAATTAGAAGACGGAAGAACTCTATCCGACTACAAC 914803
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
|| ||||| ||||| || || || |||| | || |||| || |||
Sbjct 914804 ATCCAAAAGGAATCCACACTCCACTTGGTCTTGAGGTTGAGAGGAGGT 914851
>seq27
Length=1195410
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 23338 ATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGC 23397
||||||||| ||| ||||||||||||||| ||||||||||| || || | || |||||
Sbjct 100465 ATTTTCAACACGTTGCATAAAAAGATCCGGAATCCATAGAGCATAAAATAAGTCTCGGGC 100406
Query 23398 GCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATG 23457
| || || ||||| ||| |||||| | | | || ||||| | | ||| ||||
Sbjct 100405 CCTCATTTCTTCTTTTCCGTGATTCTTTCTTAGTTGTAAGAAGTCAATAATATCCCCATG 100346
Query 23458 CCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTA 23517
||| || || | ||| | ||| || || || | || || || || |||||||| ||
Sbjct 100345 CCATGGTTCCAAGTATATACAAAAGGCACCAGGGCGTTTGTTCCCACCTTGATCGACATA 100286
Query 23518 ACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGA 23565
| || |||||||| | || | ||||| || || | ||| || ||
Sbjct 100285 TCTTGCTGTGTTGTTAAAAACCCGCAGCATAGGAACTAAACCATTTGA 100238
>seq19
Length=169523
Score = 98.7 bits (108), Expect = 9e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
||||||||||||||| ||||| || || || || || || ||| | || || ||| | ||
Sbjct 25623 CATGCAAATTTTCGTCAAGACCCTAACTGGTAAGACTATTACCTTGGAAGTCGAATCTTC 25682
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
||||| | || | ||||| | || ||||||||||| | || || |||||
Sbjct 25683 CGACACCATTGACAATGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCA 25742
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|| | | || || ||||| || || |||||||| || ||| || || || ||
Sbjct 25743 ACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTACAA 25802
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
||| ||||| ||||| || ||||| |||| | ||| |||| || |||
Sbjct 25803 CATCCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGGT 25851
>seq32
Length=1561830
Score = 84.2 bits (92), Expect = 2e-11
Identities = 151/221 (68%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260
|||||| ||||| |||| || || || ||||| | || || ||| | || |||| |
Sbjct 1515217 TTTCGTCAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCTGACACCAT 1515158
Query 31261 CGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCT 31320
|| | ||||| | || ||||||||||| | || || ||||| || | |
Sbjct 1515157 TGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAACAAAGATT 1515098
Query 31321 AATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380
|| || ||||| || || ||||||||| || ||| || || || ||||| |||||
Sbjct 1515097 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTTTGTCTGACTACAACATCCAAAA 1515038
Query 31381 AGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||||| || ||||| |||| | ||||| || || ||||
Sbjct 1515037 GGAATCCACCCTTCACTTGGTCTTGAGACTAAGAGGTGGTA 1514997
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445766199405120
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