Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F000747785.1_202014-06-
30] 36 sequences; 11,165,408 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq32 114 3e-20
seq36 105 1e-17
seq2 89.7 1e-12
>seq32
Length=1561830
Score = 114 bits (126), Expect = 3e-20
Identities = 297/445 (67%), Gaps = 17/445 (4%)
Strand=Plus/Plus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
||||| || ||||| || ||||| | || || |||| | || || |||| ||||||
Sbjct 411493 GTTGCGTTCGCTGCCGTGGAAGGTGTGTTTTTCTCTGGTTCCTTTGCTGCCATCTTCTGG 411552
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
| ||||| | |||| | |||| ||| | |||| ||| || || || |||| || ||
Sbjct 411553 TTGAAGAAGAAGGGTTTGATGCCAGGTTTGACCTTCTCAAACGAATTGATTTGCAGAGAT 411612
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097
|||||| | || ||||||||| || |||| || | | |||| || | |
Sbjct 411613 GAAGGTTTGCACACCGACTTTGCCTGTTTGCTATTCCATCA----TTTGAAGAA---CAA 411665
Query 102098 TCAAGAGA-AAGGATTCTTGAAA---TTGTCACTGAAGCCGTCCGAATTGAACAAGAATT 102153
| ||| || |||| | |||| | |||| ||||| || || ||| |||| |
Sbjct 411666 GCCAGATCCAAAGATTGTCGAAAGAATCATCACAGAAGCTGTTGAGATCGAA-AAGAGAT 411724
Query 102154 TCT-CACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGT 102212
|| || | | || || ||| || |||| |||||| | ||||||| ||| |
Sbjct 411725 ACTTCATCGACGCTCTACCCGTTTCTCTATTGGGTATGAACGCTGATTTGATGAACCAAT 411784
Query 102213 ACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGG--ACTAGAAAAGCACTATAA 102270
|| | |||||||| ||||| | |||| |||||| | || || ||||| |||| ||
Sbjct 411785 ACGTCGAATTTGTTGCAGACAGACTACTGGTTGCTTTAGGTAACAAGAAAT--ACTACAA 411842
Query 102271 TGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTT 102330
|| || ||||| ||| || ||||| || |||||| | | ||| ||||| || ||
Sbjct 411843 CGTCACTAACCCATTCGACTTTATGGAAAACATTTCCTTGGCCGGTAAAACCAATTTCTT 411902
Query 102331 TGAAAAGAGAGTCGCCGAGTATCAA 102355
||||||||||| | || || |||
Sbjct 411903 CGAAAAGAGAGTGTCAGACTACCAA 411927
>seq36
Length=1733117
Score = 105 bits (116), Expect = 1e-17
Identities = 167/237 (70%), Gaps = 2/237 (1%)
Strand=Plus/Minus
Query 35384 GATAGAGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCT 35443
|||||| ||||| ||||||||||| || || || ||||||||| | ||||| || ||
Sbjct 871228 GATAGACGTGAGGGTGATTTGGGACCAGTTTATGGGTTCCAATGGAGACATTTCGGAGCA 871169
Query 35444 GAATATGATACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATA 35503
||||| | || ||| |||||| | ||| | ||| ||||||| || | || |
Sbjct 871168 GAATACAAGACATGTGACGATGATTATTCGGGACAAGGTGTTGATCAGTTAAGCGATGTG 871109
Query 35504 CTAAAGACCCTGAGAGAA-AATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCC 35562
| | | ||| |||| ||||| | ||||||||||| |||||| | |||||||| ||
Sbjct 871108 ATTCATAAGTTGA-AGAACAATCCTTACGATAGAAGGATTATTATGTCAGCATGGAACCC 871050
Query 35563 TATGGATCTTCACCTTATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGT 35619
| ||| | | ||||||||||| |||||||| || |||| || |||||
Sbjct 871049 TCCTGATTTCCCAAAAATGGCTCTTCCACCATGCCATGTGTTCTCTCAGTTCTATGT 870993
>seq2
Length=945054
Score = 89.7 bits (98), Expect = 1e-12
Identities = 182/268 (68%), Gaps = 2/268 (1%)
Strand=Plus/Plus
Query 94774 TGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTA 94833
|||| ||| | || | || ||||| ||||| ||||| || || ||||| | |||
Sbjct 341184 TGAATGTGCAAACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTG 341243
Query 94834 TCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGG 94893
|| |||||||| |||||| ||| || | | | ||| ||||| || || || | |||
Sbjct 341244 TCGTAAATACCTTCAATGGAATCTTCCTTCATGGCCACTAGGAAACATGATGACATTTGT 341303
Query 94894 GGTGTGACT-GTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGA 94952
|| ||| || ||| ||| || ||||| || ||||| || || || || ||
Sbjct 341304 GGA-TGAGGAGTACCAGCATTGAAAAGTGTAGGCGAAGCGTGTGTGAAGTATCTTAGAGA 341362
Query 94953 CATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCAC 95012
||| || | || ||||| | || || || ||| ||||| || |||||||||||
Sbjct 341363 CATTAGGTTGTAAGTTTCCAAAACCTTTTCAATATCTCTACCGTGGATACCGACAGCCAC 341422
Query 95013 ACGCATAATCATGTCCTGAGGGCGCTCA 95040
| ||| ||||||| ||||| || |||
Sbjct 341423 TCTCATGATCATGTGTTGAGGACGTTCA 341450
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989583543554380
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |