Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F000747785.1_202014-06- 30] 36 sequences; 11,165,408 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq32 111 2e-19 seq2 98.7 1e-15 seq33 95.1 1e-14 >seq32 Length=1561830 Score = 111 bits (122), Expect = 2e-19 Identities = 319/485 (66%), Gaps = 17/485 (4%) Strand=Plus/Plus Query 52565 AAAAGGATGATTGGGCATTGAAATGGATCGAAAACGACAAAGCCACTTTTGCCGAACGTC 52624 |||||| | | ||||| | | |||||| | ||| ||||| | || ||| | Sbjct 411431 AAAAGGCTCAATGGGCCATTAGATGGATTCGTGATGACGAAGCCCTATACGCTGAAAGAT 411490 Query 52625 TGGTCGCGTTTGCTATAGTGGAAGGTGTGtttttttCGGGTAGTTTTGCGGCAATATTTT 52684 |||| ||||| ||| ||||||||||||||||| || ||| ||||| || || || | Sbjct 411491 TGGTTGCGTTCGCTGCCGTGGAAGGTGTGTTTTTCTCTGGTTCCTTTGCTGCCATCTTCT 411550 Query 52685 ACATCAAAACCTTGGGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATATCGCGCG 52744 | || | ||| | ||||| || | || || ||||| ||||| | | | Sbjct 411551 GGTTGAAGAAGAAGGGTTTGATGCCAGGTTTGACCTTCTCAAACGAATTGATTTGCAGAG 411610 Query 52745 ACGAAGGAATGCACACAGATTTTGCGTGTTTG-TATT--ATAATACGCGCGTTAAAGAAA 52801 | ||||| ||||||| || ||||| |||||| |||| || || || ||||| Sbjct 411611 ATGAAGGTTTGCACACCGACTTTGCCTGTTTGCTATTCCATCAT-------TTGAAGAAC 411663 Query 52802 AATTGTCATATGAAAAAATTCTAGA---CATGTTTAAAGAGGCCGTCGACATTGAAAA-A 52857 || | || || ||| ||| | || || | | ||| || || || || ||||| | Sbjct 411664 AA--GCCAGATCCAAAGATTGTCGAAAGAATCATCACAGAAGCTGTTGAGATCGAAAAGA 411721 Query 52858 GAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGCATGAACGCGACCATGATGTGC 52917 || | || | |||||| ||||||| || | ||||| |||||||| ||||| | Sbjct 411722 GA-TACTTCATCGACGCTCTACCCGTTTCTCTATTGGGTATGAACGCTGATTTGATGAAC 411780 Query 52918 GAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCAGCTCGGTCAGCCGAAATACTAT 52977 | ||| |||| |||||||| |||||||| || | | ||| | ||||||||| Sbjct 411781 CAATACGTCGAATTTGTTGCAGACAGACTACTGGTTGCTTTAGGTAACAAGAAATACTAC 411840 Query 52978 AATGCGCGTAACCCCTTTTCGTTTATGAACAACATATCGCTCGAGGGCAAAACAAACTTT 53037 || | |||||| || |||||| | ||||| || | | || ||||| || || Sbjct 411841 AACGTCACTAACCCATTCGACTTTATGGAAAACATTTCCTTGGCCGGTAAAACCAATTTC 411900 Query 53038 TTCGA 53042 ||||| Sbjct 411901 TTCGA 411905 >seq2 Length=945054 Score = 98.7 bits (108), Expect = 1e-15 Identities = 576/900 (64%), Gaps = 29/900 (3%) Strand=Plus/Plus Query 153633 GCAATCGACGCCAAGTTGCAAACGGCAGTTTCGTCGGGGGCGCAATATTGTACTATTTCC 153692 || || || |||||||| ||||| || ||||| || ||| | |||| || ||||| Sbjct 340593 GCGATAGAAGCCAAGTTACAAACAGCGGTTTCTTCTGGGTTAGAGTATTCAACGATTTCA 340652 Query 153693 GCACACAAATTGCTGCATTTTATCAGGCCGCAATTACTTT-GATTGCTTTTGCGGTTACA 153751 |||||| || | || || || | ||| | |||| |||| || || |||||| Sbjct 340653 CAACACAAGTTCGAAGACTTGAT-AGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACA 340711 Query 153752 AGCGTCCTTGTATAGCATGTATGGTGTGCCGGTTTCGGCTTGAATTTCTATAATA--GTA 153809 ||| ||||||||||||||| |||| || || ||||||| |||| ||| | ||| ||| Sbjct 340712 AGCATCCTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTA 340771 Query 153810 CGCATCAA--TGTGACCGCGGGCATTTGATCGCGAAACTGGCCCTTGTCT-TCGTAGTGT 153866 | || ||| | ||| | | || | || | | | |||| ||| ||||| || Sbjct 340772 C-CA-CAACTTTTGAGCCTTGACAGTCTTTC---TACCACGGCCTTCTCTCTCGTAACGT 340826 Query 153867 TTGTACCAGTATTCAAACTCATCACC--AAACGTATTGTTAAGCTCGGGACATTCGTTGG 153924 | |||| | |||||| |||||||| |||| | || ||||| | || |||||| | Sbjct 340827 TCGTACAATGCTTCAAATTCATCACCGTAAACAT-CTGGTAAGC-CTGGTGCTTCGTTTG 340884 Query 153925 GACACATCAGTGACC-ATCGGCCATTTTCTTGAACGCGACGCATAAATATATCGGGAACC 153983 || | | || | || ||| | | |||| | || | ||| || | ||| || | | Sbjct 340885 GAGAGAACAAAGTCCAATCTTCGTTCTTCTCG-ACTCTCTTCATGAAAAGATCTGGGATC 340943 Query 153984 CATAGGGCGTTCATCAGGTCGCGCGCTTTCGTGTCTTCGCTGCCAATGTTTCGACGCATG 154043 ||||| || | || ||| | || | ||||| | || ||| | ||| Sbjct 340944 CATAGTGCTGGGAACAAGTCTCTTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATG 341003 Query 154044 TGTAAGACGTCCATTATGTCGCAATGCCACGGTTCCACGTAAACTGCTTGAGCGCCTTTA 154103 | | || ||| | || || | ||||| || || | ||| | || || || Sbjct 341004 TCGACGAAGTCGAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGT 341063 Query 154104 CGCTTG---CCGCCCTGATTTACGTGACGCACCATATTGTTGAAAACCCGAAGCATGGGT 154160 | |||| || || || | |||| ||| | | ||||||||||| |||| ||| || Sbjct 341064 CTCTTGTTACCACCTTGGTCAACGTAACGGGCAGTGTTGTTGAAAACACGAATCATTGGA 341123 Query 154161 AGCAGACCGCTGGCGGTACCGTTTGTAGATTTAATCTTGCTGTTGCGG--CCTCGAACGC 154218 | | |||| | | |||||||| ||| ||| | | ||| |||| | Sbjct 341124 ATAATACCGTTAGAAGTACCGTTAGTACCAGCAATGT--AAGAACCGGTAGAACGAATGT 341181 Query 154219 TGTTTACGTTTAATCCAATACCGCCGCCGTGTTTGGAGATCATGGCGCAATCGTTCAATG 154278 ||| | || || |||||||| || || || ||||||||||| || || ||||| | Sbjct 341182 TGTGAATGTGCAAACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAG 341241 Query 154279 TGTTATAGATACCACGAATGCTATCGCTTTCCATGGTCAATAGGAAACATGAACTCATCT 154338 ||| || ||||| |||| ||| | ||||| || |||||||||||| ||| | Sbjct 341242 TGTCGTAAATACCTTCAATGGAATCTTCCTTCATGGCCACTAGGAAACATGATGACATTT 341301 Query 154339 GCGGAGTTGGAGTGCCGGCAGCAAACATGGTCGGGCTTGCGTGCGTGTA-CATCTTTGTG 154397 | ||| ||||| || ||| || | || || ||||| ||| | ||||| | | Sbjct 341302 GTGGATGAGGAGTACCAGCATTGAAAAGTGTAGGCGAAGCGTGTGTGAAGTATCTTAGAG 341361 Query 154398 CTCAAAAATTTATAAGACTTTATGGCATTATCAATGTCGTCT-CCAAAGATACCTAGAGC 154456 || | || |||| | | | || ||||| || ||| || |||||| | ||| Sbjct 341362 -ACATTAGGTTGTAAGTTTCCAAAACCTTTTCAATATC-TCTACCGTGGATACCGACAGC 341419 Query 154457 TATACGCATGTGCATGTGTTGAATCCTTTCGGCAACTTTTTCGTTAATTTTTATCAGGTA 154516 | | |||| |||||||||| | ||| ||||| || |||| ||| ||| || ||| Sbjct 341420 CACTCTCATGATCATGTGTTGAGGACGTTCAGCAACCTTACCGTTGATTCTTAGCAAGTA 341479 >seq33 Length=1695378 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| || | ||| |||||||||| ||||| || ||||||||||| || ||| Sbjct 914166 CCACCTCTCAATCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCGGAT 914107 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || |||||| | |||||||||||| | |||| | ||| || || ||||| Sbjct 914106 AGAGTTCTTCCGTCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGGA 914047 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||| ||||| ||| | || | || | | || | ||||| | | || || Sbjct 914046 ATACCTTCCTTGTC-TTGAATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCAAC 913988 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | || | || ||||| ||||| || || ||||| ||||||||| Sbjct 913987 TTCCAAAGTGATGGTTTTGCCTGTCAAAGTCTTGACGAAGATTTGCATA 913939 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| || | ||| |||||||||| ||||| || ||||||||||| || ||| Sbjct 914394 CCACCTCTCAATCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCGGAT 914335 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || |||||| | |||||||| ||| | |||| | ||| || || ||||| Sbjct 914334 AGAGTTCTTCCGTCTTCTAATTGTTTACCCGCAAAAATCAATCTTTGTTGGTCTGGAGGA 914275 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || |||||||| || ||| | || | || | | || | ||||| | | || || Sbjct 914274 ATACCTTCTTTATC-TTGAATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCGAC 914216 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | || | ||||| || ||||| || || ||||| ||||||||| Sbjct 914215 TTCCAAAGTGATAGTCTTACCTGTCAAAGTCTTGACGAAGATTTGCATA 914167 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| || | ||| |||||||||| ||||| || ||||||||||| || ||| Sbjct 914622 CCACCTCTCAATCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCGGAT 914563 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || |||||| | |||||||| ||| | |||| | ||| || || ||||| Sbjct 914562 AGAGTTCTTCCGTCTTCTAATTGTTTACCCGCAAAAATCAATCTTTGTTGGTCTGGAGGA 914503 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || |||||||| || ||| | || | || | | || | ||||| | | || || Sbjct 914502 ATACCTTCTTTATC-TTGAATCTTAGACTTCACATTATCAATAGTGTCAGAAGATTCGAC 914444 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | || | ||||| || ||||| || || ||||| ||||||||| Sbjct 914443 TTCCAAAGTGATAGTCTTACCTGTCAAAGTCTTGACGAAGATTTGCATA 914395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063776771200