Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F000747785.1_202014-06-
30] 36 sequences; 11,165,408 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq2 233 3e-56
seq32 172 7e-38
seq27 161 1e-34
>seq2
Length=945054
Score = 233 bits (258), Expect = 3e-56
Identities = 742/1142 (65%), Gaps = 20/1142 (2%)
Strand=Plus/Plus
Query 71774 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 71833
||||||| || || || || | |||||||||||| |||||||| |||||||| || || |
Sbjct 340669 ACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCCTTGTATAGCA 340728
Query 71834 TAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 71893
| || || ||||||||||| | |||| ||| | || || | ||| | | ||||||
Sbjct 340729 TGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACAACTTTTGAGCCT 340788
Query 71894 TTATTATATTCTTGTATCTCTT--TTCTCTTTCGTATTGTGTATATAATCGTTCGAACTC 71951
| | | || | || | | |||||| ||||| || || ||| ||| || ||
Sbjct 340789 TGACAGTCTT--TCTACCACGGCCTTCTCTCTCGTAACGTTCGTACAATGCTTCAAATTC 340846
Query 71952 GTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCC 72011
|| || || ||| ||| || || ||| || ||| | | ||| | ||| ||| |
Sbjct 340847 ATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGAGAGAACAAAGTCCAATCTTC 340906
Query 72012 ATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCT 72071
| | | |||| ||||| || ||||| || ||||| || ||| || | |||||
Sbjct 340907 GTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCTCT 340966
Query 72072 GGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGA 72131
| | || || || || |||||| | | |||| ||| | | ||||| ||
Sbjct 340967 TGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATATCTGA 341026
Query 72132 ATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTAT 72191
||||| || || | ||| | ||| | | || || | ||||| || || || || |
Sbjct 341027 GTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAAC 341086
Query 72192 GTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATT 72251
||| | || ||||| || |||| | | ||||||||||||||| || || | ||| ||
Sbjct 341087 GTAACGGGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGTT 341146
Query 72252 GGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCC 72311
|| || | || || || | | |||||| ||| ||| | ||| || || ||
Sbjct 341147 AGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACC 341206
Query 72312 TGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATC 72371
|| | |||||||| | || ||| || || || || || || || || || |||
Sbjct 341207 AGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAATC 341266
Query 72372 ATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAA 72431
||| ||||| | ||| ||||| |||||||| || || ||| || ||||| ||
Sbjct 341267 TTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAA 341326
Query 72432 TAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGC 72491
| ||||| |||||||| || || || || ||||| ||| ||||| || || | | |
Sbjct 341327 AAGTGTAGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCCAAAAC 341386
Query 72492 TGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCT 72551
||| ||||| | || || || || || || | ||| | ||| || ||||| |
Sbjct 341387 CTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGACG 341446
Query 72552 TTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 72611
|||| | | ||| || ||| | | |||||| || |||||| || || ||||| ||
Sbjct 341447 TTCAGCAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGAA 341506
Query 72612 ATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTT 72671
|||||| || || |||| ||||| | ||| || | ||||| | ||| |||
Sbjct 341507 GTAGTTGAATTGGAAATCTCTGTCGTAGACAAT---CGCA--GAGTTCA-AAGTATCTTT 341560
Query 72672 GTTAACTATATCCATGGTGATAC-------TTGAAATAATCGGAGAATGTTTCCCATTTT 72724
||| | || | || || |||| ||||| || || || || | ||| | |
Sbjct 341561 GTTCTCCATGACGAT-GTCATACACCTCATCCGAAATCATAGGCGAGTGAATACCAGTCT 341619
Query 72725 TAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCT 72784
| || || || | || | || || || | ||||| ||| | || | |||| ||
Sbjct 341620 TTGGGTTGACCCATCTGTACAAGTCTTCGACCACTTGCGAAAACTGCTTCGTGGTTTGCT 341679
Query 72785 TGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATGTTGTGTAG 72844
|||| | || || | ||| ||||| ||||| | | | || |||||||| || || |
Sbjct 341680 TGTGCAAGTTAGAAATGGCAATTCTAGCGGCCAAAGTAGCGTAATCTGGGTGAATGGTGG 341739
Query 72845 TACAAGT-GGCTGCTATTTCTGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTA 72903
| || || ||| | |||| || |||| | || ||||| || || ||||| || | |
Sbjct 341740 T-CATGTAGGCACATGTTTCAGCAGCCAAGTTATCTAATTCAACAGTCGTTACACCTTCA 341798
Query 72904 TA 72905
||
Sbjct 341799 TA 341800
>seq32
Length=1561830
Score = 172 bits (190), Expect = 7e-38
Identities = 576/885 (65%), Gaps = 20/885 (2%)
Strand=Plus/Minus
Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833
|||||||| || ||| | |||||||| ||||| || || || |||| || || |||
Sbjct 411929 TTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTT 411870
Query 41834 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 41893
||||| || || || || || || || || || ||| || || || || |
Sbjct 411869 TCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGT 411810
Query 41894 AATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 41953
| ||| ||||| | ||||| | ||| ||||||| ||| ||||| || | ||
Sbjct 411809 AGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGA 411750
Query 41954 TTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 42012
||| || ||||| | | ||| | |||| ||| || || || ||||| || ||
Sbjct 411749 GAAACGGGTAGAGCGTCGATGAAGTATCTCTT-TTCGATCTCAACAGCTTCTGTGATGAT 411691
Query 42013 AGATCTT---ACTGTTTCTTCA-CTCGGTGGATACAATAAATGTTTAAACATCAAACATG 42068
|||| || | | | | || | | | | | ||||| | || | |||||| |
Sbjct 411690 ---TCTTTCGACAATCTTTGGATCTGGCTTGTT-CTTCAAATGATGGAATAGCAAACAGG 411635
Query 42069 CGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGG 42128
| || ||| ||||| ||| |||||||| | ||| |||||||| || || || | || |
Sbjct 411634 CAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACCTG 411575
Query 42129 GCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTC 42188
|||| | || ||| || | ||| || || | ||||| || ||||| || || | |
Sbjct 411574 GCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCAAAGGAACCAGAGAAAAACACAC 411515
Query 42189 CTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCAT---GTATCC 42245
|||| || || || || |||| | ||| || | || ||| ||||| | ||||
Sbjct 411514 CTTCCACGGCAGCGAACGCAACCAATCTTTCAGCGTATAGGGCTTCGTCATCACGAATCC 411455
Query 42246 A-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAG 42304
| || || ||||| | ||||| | ||| | || || ||||| |||||||| ||
Sbjct 411454 ATCTAATG-GCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAAC 411396
Query 42305 AGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCT 42364
| ||| | ||| ||| ||| || | || || || ||||| | ||| ||||
Sbjct 411395 AAGAAGTCGTGTTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAGTTTCG 411336
Query 42365 GAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGT 42424
|| ||||||||||| || || || || ||||||||||| |||| || | || ||
Sbjct 411335 GAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGC 411276
Query 42425 ACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAA 42484
|| || | | | || ||| | || ||||||||||| || || || || |||||
Sbjct 411275 ACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAG 411216
Query 42485 AACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAAT----TTATTCCAATC 42540
||||| | || || ||| || | |||| | ||| || || ||||| ||
Sbjct 411215 AACGCAAGCACTCTGGAGATGAAAAATCTCTCGTTC-TCGTTCATTCTGTTGTTCCAGTC 411157
Query 42541 ATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTT 42600
|| | ||| || || | ||| | |||||| | |||||||| || || || || | ||
Sbjct 411156 ATGAAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTCTCTT 411097
Query 42601 ATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAA 42645
||| | |||||| || || || | |||||||||| |||||
Sbjct 411096 ATAAGCCTCCCAGATTTCGTGGTACTTGATTGGGAAAAGCACAAA 411052
>seq27
Length=1195410
Score = 161 bits (178), Expect = 1e-34
Identities = 596/919 (65%), Gaps = 35/919 (4%)
Strand=Plus/Minus
Query 71373 TGATCCTGCATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAA 71432
|||||||| | | ||||| | || | ||| || || |||||| | ||||| |
Sbjct 101122 TGATCCTGGGAAACTTTCGTAGTGGCCATATTTCTCAGCGAGTTCAATAGATGCCTCAAT 101063
Query 71433 TGCTCCATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGT-GCTTCCGGGCTAT 71491
||| ||| ||||| ||||| || |||| ||||| | || | | || || |
Sbjct 101062 TGCGGCATGGTAAATAGTTTCAAATATCTGTTTATTCA-ATGTGGCAGCATCTTCTGATT 101004
Query 71492 CAAATGGATAATTTA-AGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATA 71550
|||| || | | || |||| ||||| || ||||| | ||||||||| |||||| | |
Sbjct 101003 CAAAGGG-TGTTCTACAGAGCATAAAAGCATCTGCAAGTCCTTGAACACCAATAGCTAAT 100945
Query 71551 GGTCTGTGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATA 71610
|||| |||||| || ||| || ||||| ||||| ||| || |||||||
Sbjct 100944 GGTCGGTGTCTTAAGTTGCCTCTTTTTGCCTCTGGGATAGGGTAAGCTCCAACATCTATA 100885
Query 71611 ATTTTATTGAGATTTCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAAT 71670
|| ||| ||||| || || | ||||| || ||| | || | | ||| ||||||
Sbjct 100884 GTTCTATCTAGATTCCTAACCAACACTTTAACAACACGATGAAGAGTTACAAAGTCAAAT 100825
Query 71671 CTCC------CATC------TATT---ACAAAC--ACGTTCAAGGCAACAGATGCCAGAT 71713
|||| |||| || || | || | || || ||||| ||||
Sbjct 100824 ACAGGAGAATCATCAGAAGTTATTTTGACGTACGTAGGT--AGTGCGACTGATGCAAGAT 100767
Query 71714 TACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTAC 71773
| || || ||||| || | | ||| | | |||||| |||||||||
Sbjct 100766 TGCAGACTGCTACTTCCTCTGGTGAACTATACTCCACGATTTCACAACAAAGATTAGACG 100707
Query 71774 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 71833
|||| ||| ||||| |||| || || ||| | || || | |||||||||||| |
Sbjct 100706 ACTTAATGACACCTAAGTTTTTCTGGTTGGACTTCTCATTGCATGAATCCTTATAAAGCA 100647
Query 71834 TAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 71893
| || ||| || || || | ||| || || ||| | ||| | | | || |
Sbjct 100646 TGAAAGGAACTCCTGTCTCCGTTTGACTTTGTAGAATTTCCGACCAAATTTGTTGCGCTT 100587
Query 71894 TTATTATATTC-TTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCG 71952
| ||| | ||| ||| | || ||||| || || | | ||||| || ||||||
Sbjct 100586 TCATTTTTTTCATTGGAA-TCAATTCTCGCTCATACTTTTCATATAGGGTTTTGAACTC- 100529
Query 71953 TCTCCCCAAGCATTGTC---TAATCCAGGACATTCATTCGGACACATCAATGACCACTCT 72009
| | || |||| ||| ||| || | ||||| |||| | | ||||| |||
Sbjct 100528 TGTACCATAGCA--GTCAGATAAACCTGTTGCTTCATCTGGACTAAAAATGGACCAATCT 100471
Query 72010 CCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCT 72069
||| || | || |||| |||||| ||||| |||||||| ||||| ||||| |||
Sbjct 100470 TCATTATTTTCAACACGTTGCATAAAAAGATCCGGAATCCATAGAGCATAAAATAAGTCT 100411
Query 72070 CTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCA 72129
| || || || || ||||| ||||||| | || | | ||| | ||||||||
Sbjct 100410 CGGGCCCTCATTTCTTCTTTTCCGTGATTCTTTCTTAGTTGTAAGAAGTCAATAATATCC 100351
Query 72130 GAATGCCACGGTTCCAAGTATATGGCCATAA--CTCCCGGCCGTTTGTTTCCTCCCTGAT 72187
|||||| |||||||||||||| || || | || || |||||||| || || ||||
Sbjct 100350 CCATGCCATGGTTCCAAGTATAT--ACAAAAGGCACCAGGGCGTTTGTTCCCACCTTGAT 100293
Query 72188 CTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCAC 72247
| | ||||| || ||||| ||| |||| | || ||| |||| | |||||| || | ||
Sbjct 100292 CGACATATCTTGCTGTGTTGTTAAAAACCCGCAGCATAGGAACTAAACCATTTGAAGTAC 100233
Query 72248 CATTGGTCCCGGAGATATA 72266
|||| | ||| ||||||||
Sbjct 100232 CATTCGACCCTGAGATATA 100214
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671138897987360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |