Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F000747785.1_202014-06- 30] 36 sequences; 11,165,408 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq8 134 2e-27 seq14 109 9e-20 >seq8 Length=929314 Score = 134 bits (148), Expect = 2e-27 Identities = 192/268 (72%), Gaps = 2/268 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| | | |||| || |||||||||||||||| ||||||||||||||||| Sbjct 252510 GCCAAGCGTCACAGAAAGATC-CTCAGAGATAACATCCAAGGTATCACCAAGCCAGCTAT 252452 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | |||| | | ||||| ||||||||| | || || ||| |||| ||||| | Sbjct 252451 CAGAAGATTGGCCAGAAGAGGTGGTGTCAAGCGTATTTCCGGTTTGATCTACGAAGAAGT 252392 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||| | ||| | |||| ||| | | | |||||| |||||| || || || || Sbjct 252391 CCGTAACGTTCTAAAGACTTTCTTGGAATCTGTTATCAGAGATGCTGTCACATACACTGA 252332 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || | |||||||| ||||| | ||| |||| || || ||||| | ||||| Sbjct 252331 ACACGCCAAGAGAAAGACTGTTACCTCTCTCGATGTCGTTTACGCTTTGAAGAGACAAGG 252272 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | | |||||||| || ||||| Sbjct 252271 TAGAACTTTGTATGGTTTCGGTGGTTAA 252244 >seq14 Length=1201207 Score = 109 bits (120), Expect = 9e-20 Identities = 186/267 (70%), Gaps = 2/267 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| | | |||| || |||||||||||||||| |||||||||||||| || Sbjct 904390 GCCAAGCGTCACAGAAAGATC-CTCAGAGATAACATCCAAGGTATCACCAAGCCAGCCAT 904448 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | |||| | | ||||| ||||||||| | || || ||| |||| ||||| | Sbjct 904449 CAGAAGATTGGCCAGAAGAGGTGGTGTCAAGCGTATTTCCGGTTTGATCTACGAAGAAGT 904508 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||| | ||| | |||| ||| | | |||| ||| || || || || || || Sbjct 904509 CCGTAACGTTCTAAAGACTTTCTTGGAATCCGTCATCAGAGACGCCGTCACATACACTGA 904568 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || | |||||||| || || | ||| | || || || ||||| | ||||| Sbjct 904569 ACACGCCAAGAGAAAGACTGTTACTTCTCTAGATGTTGTGTACGCCTTGAAGAGACAAGG 904628 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTA 16698 | | | |||||||| || |||| Sbjct 904629 TAGAACTTTGTATGGTTTCGGTGGTTA 904655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075167084948