Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F000747785.1_202014-06- 30] 36 sequences; 11,165,408 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq32 125 8e-24 >seq32 Length=1561830 Score = 125 bits (138), Expect = 8e-24 Identities = 345/530 (65%), Gaps = 7/530 (1%) Strand=Plus/Minus Query 21472 CAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGT 21531 |||||| ||||| || |||||||||||||| || | || ||||| || || || || Sbjct 411642 CAAACAGGCAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGT 411583 Query 21532 TAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAA 21591 ||||| ||||| || || |||| || ||||| || || | ||||| | || || || Sbjct 411582 CAAACCTGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCAAAGGAACCAGAGAA 411523 Query 21592 GAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATC 21651 || | || || |||||||| || ||||| |||| |||| ||||| | ||| | ||| Sbjct 411522 AAACACACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGCGTATAGGGCTTCGTCATC 411463 Query 21652 CAATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGC 21711 |||||| | ||||||| ||||||||||| || ||| || ||||| || Sbjct 411462 ACGAATCCATCTAATGGCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGC 411403 Query 21712 TTTTAA-AAGATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTAT 21770 || || |||| | | | ||| | ||| | ||| || Sbjct 411402 ATTCAACAAGAAG-TCGTGTTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAAT 411344 Query 21771 ACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTG 21830 | |||| || || || ||||| ||| || || || ||||| ||||| | || |||| Sbjct 411343 AAGTTTCGGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTG 411284 Query 21831 AACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGG 21890 | ||| ||||| | | | || || |||||||||| || || || ||||| | Sbjct 411283 GAATTTGCACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAG 411224 Query 21891 CGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAAT----TTT 21946 | ||||| || || | | | || ||| ||| ||||| || ||| || || Sbjct 411223 CAGCAAAGAACGCAAGCACTCTGGAGATGAAAAATCTCTCGTTCTC-GTTCATTCTGTTG 411165 Query 21947 TTCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAA 21996 ||||| || | ||| || || ||||| | |||||||| |||||||| Sbjct 411164 TTCCAGTCATGAAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAA 411115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531900560644640