Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F000747785.1_202014-06- 30] 36 sequences; 11,165,408 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq2 284 2e-71 seq32 188 9e-43 seq27 147 3e-30 >seq2 Length=945054 Score = 284 bits (314), Expect = 2e-71 Identities = 751/1142 (66%), Gaps = 20/1142 (2%) Strand=Plus/Plus Query 62968 ACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 63027 |||||||||| || || || | |||||||||||| |||||||| |||||||| || || | Sbjct 340669 ACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCCTTGTATAGCA 340728 Query 63028 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 63087 ||||||| ||||||||||| | |||| ||| | || || | ||| | | |||||| Sbjct 340729 TGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACAACTTTTGAGCCT 340788 Query 63088 TTATTATAGATTTGTATCTC--CTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTC 63145 | | | ||| || | | | |||||| ||||| || |||||| ||| || || Sbjct 340789 TGACAGTC--TTTCTACCACGGCCTTCTCTCTCGTAACGTTCGTACAATGCTTCAAATTC 340846 Query 63146 GTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCC 63205 || || |||||| || || || ||| | ||| | | ||| | ||| ||| | Sbjct 340847 ATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGAGAGAACAAAGTCCAATCTTC 340906 Query 63206 GTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCT 63265 || | || |||| ||||| || ||||| || ||||| || ||| || | ||||| Sbjct 340907 GTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCTCT 340966 Query 63266 GGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGA 63325 | | ||| || || || |||||| | | |||| ||| | | ||||| || Sbjct 340967 TGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATATCTGA 341026 Query 63326 ATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTAT 63385 ||||| || || | ||| | ||| | | ||||| | ||||| || || || || | Sbjct 341027 GTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAAC 341086 Query 63386 GTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATT 63445 ||| | || ||||| || |||| | | |||||||||||||||||| || |||| || Sbjct 341087 GTAACGGGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGTT 341146 Query 63446 GGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCC 63505 ||||| | || || || | | |||||| || ||| | ||| || || || Sbjct 341147 AGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACC 341206 Query 63506 TGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATC 63565 || | |||||||| | || ||| || || ||||| || ||||| || ||| ||| Sbjct 341207 AGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAATC 341266 Query 63566 ATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAA 63625 || ||||| | ||| ||||| |||||||| || || ||| || ||||| || Sbjct 341267 TTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAA 341326 Query 63626 TAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGC 63685 | ||||| |||||||| || || || || ||| | ||| ||||| || || | | | Sbjct 341327 AAGTGTAGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCCAAAAC 341386 Query 63686 TGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCT 63745 || ||||| | || || || || || || | ||| | |||||| ||||| | Sbjct 341387 CTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGACG 341446 Query 63746 TTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 63805 |||| | | ||| ||| ||| | | |||||| || |||||| || || ||||| || Sbjct 341447 TTCAGCAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGAA 341506 Query 63806 ATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTT 63865 |||||| || || |||| ||||| | ||| | ||||| | |||| ||| Sbjct 341507 GTAGTTGAATTGGAAATCTCTGTCGTAGACAATCGCAGAGTTCAAAGTATC------TTT 341560 Query 63866 GTTAACTATATCCATGGTGATAC-------TTGAAATAATCGGAGAATGTTTCCCATTTT 63918 ||| | || | || || |||| ||||| || || || || | ||| | | Sbjct 341561 GTTCTCCATGACGAT-GTCATACACCTCATCCGAAATCATAGGCGAGTGAATACCAGTCT 341619 Query 63919 TAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCT 63978 | || || || | || | || || || | ||||| ||| | || | |||| || Sbjct 341620 TTGGGTTGACCCATCTGTACAAGTCTTCGACCACTTGCGAAAACTGCTTCGTGGTTTGCT 341679 Query 63979 TGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAG 64038 |||| | || || | ||| ||||| ||||| | | | || ||||| || || || | Sbjct 341680 TGTGCAAGTTAGAAATGGCAATTCTAGCGGCCAAAGTAGCGTAATCTGGGTGAATGGTGG 341739 Query 64039 TACAAGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTA 64097 | || || ||| | |||| || |||| | || ||||| || || ||||| || | | Sbjct 341740 T-CATGTAGGCACATGTTTCAGCAGCCAAGTTATCTAATTCAACAGTCGTTACACCTTCA 341798 Query 64098 TA 64099 || Sbjct 341799 TA 341800 >seq32 Length=1561830 Score = 188 bits (208), Expect = 9e-43 Identities = 577/881 (65%), Gaps = 12/881 (1%) Strand=Plus/Minus Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072 |||||||| || ||| | |||||||| ||||| ||||| || |||| || || ||| Sbjct 411929 TTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTT 411870 Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 33132 ||||| || || || || || || || || || ||| || || || || | Sbjct 411869 TCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGT 411810 Query 33133 AATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 33192 | ||| || || || ||||| | ||| ||||||| ||| ||||| || | || Sbjct 411809 AGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGA 411750 Query 33193 TTAACTGGAAGAGCCGCAGT-AAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAAT 33251 ||| || ||||| | | ||| | |||| ||| || || || ||||| || || Sbjct 411749 GAAACGGGTAGAGCGTCGATGAAGTATCTCTT-TTCGATCTCAACAGCTTCTGTGATGAT 411691 Query 33252 AGATCTAACGGTTTCTTCA-CTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGA 33310 | || | | | | || | | | | | ||||| | || | |||||| || | Sbjct 411690 TCTTTCGACAATCTTTGGATCTGGCTTGTT-CTTCAAATGATGGAATAGCAAACAGGCAA 411632 Query 33311 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCA 33370 | ||| ||||| ||| || ||||| | ||| | |||||| || || || | || |||| Sbjct 411631 AGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACCTGGCA 411572 Query 33371 TTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTT 33430 | | || ||| || | ||| || |||| ||| || || ||||| || || | |||| Sbjct 411571 TCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCAAAGGAACCAGAGAAAAACACACCTT 411512 Query 33431 CTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCAT---GTATCCA-C 33486 | || ||||| || |||| | ||| || | || ||| ||||| | ||||| | Sbjct 411511 CCACGGCAGCGAACGCAACCAATCTTTCAGCGTATAGGGCTTCGTCATCACGAATCCATC 411452 Query 33487 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGA 33546 | || ||||| | ||||| | ||| | || || ||||| |||||||| || | Sbjct 411451 TAATG-GCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAACAAG 411393 Query 33547 TAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAA 33606 ||| | ||| ||| ||| || | ||||| || ||||| | ||| |||| || Sbjct 411392 AAGTCGTGTTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAGTTTCGGAG 411333 Query 33607 TGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACT 33666 ||||||||||| || || || || ||||||||||| | || || | ||| || || Sbjct 411332 TGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGCACC 411273 Query 33667 TCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAAC 33726 || | | | || |||| |||| ||||| ||||| || || || || ||||| ||| Sbjct 411272 TCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAGAAC 411213 Query 33727 GCCAATACATGTTTTATAAAATATTTTTCG-TCTGGT--GTTAGTTTATTCCAATCATTG 33783 || | || || ||| || | ||| ||| || || || ||||| |||| Sbjct 411212 GCAAGCACTCTGGAGATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTCCAGTCATGA 411153 Query 33784 ATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATAC 33843 | ||| || || | ||| | |||||| | |||||||| || ||||| || | ||||| Sbjct 411152 AGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTCTCTTATAA 411093 Query 33844 ATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAA 33884 | |||||| || | || | ||||||||||| ||||| Sbjct 411092 GCCTCCCAGATTTCGTGGTACTTGATTGGGAAAAGCACAAA 411052 >seq27 Length=1195410 Score = 147 bits (162), Expect = 3e-30 Identities = 206/287 (72%), Gaps = 4/287 (1%) Strand=Plus/Minus Query 63176 TTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATC 63235 |||||| |||| | | ||||| ||| | | || | || |||| |||||| ||||| Sbjct 100498 TTCATCTGGACTAAAAATGGACCAATCTTCATTATTTTCAACACGTTGCATAAAAAGATC 100439 Query 63236 AGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTT 63295 |||||||| ||||| ||||| |||| || || ||| || ||||| |||||| Sbjct 100438 CGGAATCCATAGAGCATAAAATAAGTCTCGGGCCCTCATTTCTTCTTTTCCGTGATTCTT 100379 Query 63296 TTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAA- 63354 | | || | | ||| | |||||||| |||||| |||||||||||||| || || Sbjct 100378 TCTTAGTTGTAAGAAGTCAATAATATCCCCATGCCATGGTTCCAAGTATAT--ACAAAAG 100321 Query 63355 -CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTC 63413 | ||||| |||||||| || || ||||| | ||||| || ||||| ||| |||| | | Sbjct 100320 GCACCAGGGCGTTTGTTCCCACCTTGATCGACATATCTTGCTGTGTTGTTAAAAACCCGC 100261 Query 63414 AACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATA 63460 | ||| |||| | ||| ||||| ||||||| | || |||||||| Sbjct 100260 AGCATAGGAACTAAACCATTTGAAGTACCATTCGACCCTGAGATATA 100214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622946919673760