Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F000747785.1_202014-06- 30] 36 sequences; 11,165,408 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq2 140 8e-28 seq36 100 7e-16 >seq2 Length=945054 Score = 140 bits (154), Expect = 8e-28 Identities = 1119/1776 (63%), Gaps = 78/1776 (4%) Strand=Plus/Minus Query 363430 ATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATC 363489 ||||| ||| | ||| |||||| || || || ||| | ||| | || ||| | |||||| Sbjct 341467 ATCAACGGTAAGGTTGCTGAACGTCCTCAACACATGATCATGAGAGTGGCTGTCGGTATC 341408 Query 363490 CATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTA-TT 363548 || | ||| |||| | | ||||| || || || | | || || || Sbjct 341407 CACGGTAGAGATATTGAAAAGGTTTTGGAAACTTACAACCTAATGTCT-CTAAGATACTT 341349 Query 363549 CACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTG 363608 ||| ||||| |||| ||| | | ||||||||| |||| | ||||||| ||||| || || Sbjct 341348 CACACACGCTTCGCCTACACTTTTCAATGCTGGTACTCCTCATCCACAAATGTCATCATG 341289 Query 363609 CTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTG 363668 || || | |||||||| |||||||| || ||||| | ||||| | ||| | || Sbjct 341288 TTTCCTAGTGGCCATGAAGGAAGATTCCATTGAAGGTATTTACGACACTTTGAAGGAATG 341229 Query 363669 TGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-AC 363727 ||| | || || |||| || || || |||||| | || ||||| ||||| | || Sbjct 341228 TGCCATGATCTCTAAGACCGCTGGTGGTATTGGTTTGCACATTCACAACATTCGTTCTAC 341169 Query 363728 AGAACAGTTACATTCGCGGCACAGGGGGATACT-CGAATGGGCTGGTTCCCATGCTTCGT 363786 | ||||||| || || || |||| | || || | |||| ||| ||||| Sbjct 341168 CGGTTC-TTACATTGCTGGTACTAACGG-TACTTCTAACGGTATTATTCCAATGATTCGT 341111 Query 363787 GTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTT 363846 || || |||| ||||| | ||||| ||||| ||||| ||| | || || || Sbjct 341110 GTTTTCAACAACACTGCCCGTTACGTTGACCAAGGTGGTAACAAGAGACCTGGTGCCTTC 341051 Query 363847 GCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAAC 363906 || |||| ||||||| || | ||||| || || || | || || | || ||| Sbjct 341050 GCCTTGTACATCGAGCCATGGCACTCAGATATCTTCGACTTCGTCGACATCAGAAAGAAC 340991 Query 363907 ACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCAT 363966 || || || ||| | |||||| | || ||||| ||||| ||| | | || | | Sbjct 340990 CACGGTAAGGAAGAAATCCGTGCAAGAGACTTGTTCCCAGCACTATGGATCCCAGATCTT 340931 Query 363967 TTTATGAAGCGCGTGGAGGCAGGTAAGAA--TTGGTCACTCTTTTGCCCACACGAATGTC 364024 || |||||| | || ||| | | | ||| |||| | | || | ||| ||||| | Sbjct 340930 TTCATGAAGAGAGTCGAG--AAGAACGAAGATTGGACTTTGTTCTCTCCAAACGAAGCAC 340873 Query 364025 CAGGTCTTTCC-GATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCG 364083 |||| ||| || ||||| | ||||| || | || || | |||||| || || Sbjct 340872 CAGG-CTTACCAGATGTTTACGGTGATGAATTTGAAGCATTGTACGAACGTTACGA---- 340818 Query 364084 GAGGGAAAGGC----TCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGA 364139 ||| ||| | | | | ||||| | || || ||| | |||| || ||| |||| Sbjct 340817 GAGAGAAGGCCGTGGTAGAAAGACTGTCAAGGCTCAAAAGTTGTGGTACGCTATCTTGGA 340758 Query 364140 TTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTC 364199 | || | || || || || || | ||| | ||||| ||| | || ||| ||| Sbjct 340757 AGCTCAAACCGAAACTGGTACCCCATTCATGCTATACAAGGATGCTTGTAACAAGAAGAG 340698 Query 364200 CAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATA 364259 || || || || | ||||| || || ||| | ||| || || ||||||| Sbjct 340697 TAATCAAAAGAACTTGGGTACTATCAAGTCTTCGAACTTGTGTTGTGAAATCGTTGAATA 340638 Query 364260 CACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT 364319 | | || || || || || || |||||| | || || ||||| | || ||||| | Sbjct 340637 CTCTAACCCAGAAGAAACCGCTGTTTGTAACTTGGCTTCTATCGCTTTGCCAGCGTTCAT 340578 Query 364320 ---------AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACC---TATC- 364366 ||| ||||||| | | ||| || ||| | || || | |||| Sbjct 340577 TGAAATATCAAACGATGGTAAGACTCAA-ACCTACAACTTCAAGAAGTTGCACGATATCT 340519 Query 364367 ---ATGCT---ACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTG 364420 | | | ||| |||| | ||| | || ||| || ||||||||| || | Sbjct 340518 CTAAGGTTTTGACTCGCAACTTGAACAGAATCATTGACCGTAACTATTATCCAGTT---G 340462 Query 364421 AAGCCG--AGC-GTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCG 364477 || | | || | || || ||| | ||| | || |||| | ||||| || || | | Sbjct 340461 AAACTGCTAGAAGATCAAACATGAGACATAGACCTATTGCATTGGGTGTTCAAGGTTTAG 340402 Query 364478 CTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTC-GTGTTCTAAAT 364536 | |||| ||| |||||||| || ||||||| || || || | | | | || Sbjct 340401 CCGACGCTTTCATGATGCTACGTTTGCCATTTGACTCTGAAGAAGCAAAGAGAT-TGAAC 340343 Query 364537 AAGGAGATCTTTGAAACAATGTATTTTGCCGCAA-TGACTGCTTCGTGTGATTTGGCAAA 364595 | ||||||||||| || || || || ||| || | || || |||||||| Sbjct 340342 GTCCAAATCTTTGAAACTATCTACCATGGTGCTTGTGAAGCCTCCATG-GAATTGGCAAA 340284 Query 364596 A-ACCAAGGG--AAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCA 364652 | |||| | | | ||| || ||| || || || | || || || || Sbjct 340283 GGAAGAAGGTCCATATGAATCT--TTCCCAGGC-TCTCCAGCATCTGAAGGTAAGTTACA 340227 Query 364653 GTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCT--ACGTTCC 364710 || ||||||||| | || ||| || || |||| | ||||||| | | | | Sbjct 340226 ATTCGATCTATGGGGTAAGACCCCAACTAACCTATGGGAATGGGATAACTTGAAGGCTGA 340167 Query 364711 AACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACA-GCGCCCATGCCCACGGCTTC 364769 || | ||| | || ||| | ||||| | ||| | || || ||||| || ||||| Sbjct 340166 AA--TCAAGCAACACGGTCTAAGAAACTCTTT-GTTGCTCGCTCCAATGCCAACCGCTTC 340110 Query 364770 TACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTC 364829 ||| | || ||| | || |||||||||| ||||| || | || ||| | || || Sbjct 340109 TACATCCCAAATCTTGGGTTACAACGAGTGTTTCGAGCCATACACTTCCAACATGTACTC 340050 Query 364830 ACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTC 364889 || || || | || || ||||| | | || || ||| | | ||| | Sbjct 340049 TCGTCGTGTGTTATCTGGTGAATTCCAAATCGTCAACCCTTACTTGCTACGTGATTTGGT 339990 Query 364890 CGACCGCGGGCTGTGGGGTGACAGC-ATGAAGAACTATATCATCGCCGCTAATGGTTCTG 364948 || || | |||| ||| ||| |||||| | |||||||||| | |||||||||| Sbjct 339989 TGATTTGGGTATTTGGGATGA-AGCTATGAAGTCCCATATCATCGCTGATAATGGTTCTA 339931 Query 364949 TGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAA 365008 | || ||| | ||| | ||| |||| || || | | ||||| || || ||||||| Sbjct 339930 TCCAAAACTTGCCAAACATCCCACAAGAGCTAAAAGATTTATACAAGACTGTTTGGGAAA 339871 Query 365009 TTTCCATGCGAACTCTCATT---GATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGA 365065 | || || || | |||| |||||||| || || || | ||||| |||| ||| Sbjct 339870 TATC---GCAAAAGCACATTATCGATATGGCCGCTGACCGTGCTGCTTATATCGATCAAT 339814 Query 365066 GCCAGTCGTTTAACGT----ATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATG 365121 ||| ||||| ||| | |||| || | ||||| | ||| | || |||||| Sbjct 339813 CCCAATCGTTGAACATTCACATTCGTGCC----CCAACTATGGGTAAGTTGACTTCCATG 339758 Query 365122 CATTTCTACGGGTGGAAATCCGGTCTTAAGACAGGT 365157 ||||||||||| ||||| ||| | ||||| ||| Sbjct 339757 CATTTCTACGGATGGAAGAAGGGTTTGAAGACTGGT 339722 >seq36 Length=1733117 Score = 100 bits (110), Expect = 7e-16 Identities = 269/404 (67%), Gaps = 12/404 (3%) Strand=Plus/Minus Query 111315 TTTCCACTTCTCACAACAAAGCGAACATATTGG--AAGGGAATTGTCGAAGAACTTCTGT 111372 ||||||||||| || || ||| || | || ||||| ||| | || ||| | | Sbjct 871390 TTTCCACTTCTAACTACCAAG--AAAGTTTTCACCAAGGGTATTATTCTTGAGCTTTTAT 871333 Query 111373 GGTTTATTCGCGGAAGTACAAATGCAAATGAACTTGCAGCAAAAAATGTAAAAATTTGGG 111432 |||||||| || |||| ||| || |||| | | || ||| || || |||| Sbjct 871332 GGTTTATTTCTGGCTGTACTGATGGTAAGAAACTCTCTGATCAAGGTGTGAAGATCTGGG 871273 Query 111433 ATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTCGACA-ACGAAGAAGGT 111491 | || || ||||| ||||| | | || || | || ||| || | ||| || ||| Sbjct 871272 AAGGGAACGGATCCCGTGAGTACTTGGACTCCTTGGGACTTACAGATAGACGT-GAGGGT 871214 Query 111492 GATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAACCATG 111551 ||| | ||||||||||| || || |||||| | || || || ||||| ||||| || ||| Sbjct 871213 GATTTGGGACCAGTTTATGGGTTCCAATGGAGACATTTCGGAGCAGAATACAAGAC-ATG 871155 Query 111552 CACGACTCATATGATTC---ACAGGGAACTGATCAATTACAGAATGTCATTGATCAAATT 111608 ||| || |||| ||| || |||||| ||| |||| ||| || | | Sbjct 871154 T--GACGATGATTATTCGGGACAAGGTGTTGATCAGTTAAGCGATGTGATTCATAAGTTG 871097 Query 111609 AAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATGCATTGGAA 111668 |||||||| || | | | ||||||||| ||||||||||| || || | Sbjct 871096 AAGAACAATCCTTACGATAGAAGGATTATTATGTCAGCATGGAACCCTCCTGATTTCCCA 871037 Query 111669 AAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGT 111712 |||||||| ||||||||||| ||| | | | ||||| ||||| Sbjct 871036 AAAATGGCTCTTCCACCATGCCATGTGTTCTCTCAGTTCTATGT 870993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303352998828152