Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F000747785.1_202014-06-
30] 36 sequences; 11,165,408 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq19 116 3e-21
seq33 109 5e-19
seq32 107 2e-18
>seq19
Length=169523
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | || || || || ||||||| || | |||||| | |||||||| | |
Sbjct 25624 ATGCAAATTTTCGTCAAGACCCTAACTGGTAAGACTATTACCTTGGAAGTCGAATCTTCC 25683
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|||||||| || | ||||| ||||| ||||| ||||| || ||||| || |||
Sbjct 25684 GACACCATTGACAATGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAA 25743
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
|| ||| |||| | | || |||||| | ||||||| |||| | || || |||
Sbjct 25744 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTACAAC 25803
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|| ||||| |||||||| |||| || || || ||||||||||| ||
Sbjct 25804 ATCCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGG 25850
>seq33
Length=1695378
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047
||||||||| | ||||| || || ||||| || || | || || | ||||| || |
Sbjct 913709 AAAATGCAAATCTTTGTCAAGACGTTAACAGGTAAGACCATCACTTTGGAAGTTGAATCT 913768
Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107
||||| || || | || || ||||| || || ||||| || ||||| ||
Sbjct 913769 TCTGACACTATTGACAATGTGAAGTCTAAGATCCAAGATAAGGAAGGTATTCCTCCAGAC 913828
Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTAT 24167
||||| ||| |||||| | || |||||| | ||||| | |||| | ||| ||
Sbjct 913829 CAACAAAGATTGATTTTTGCGGGTAAGCAATTAGAAGACGGAAGAACTCTATCCGACTAC 913888
Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
||||| ||||| ||||||||| |||| ||||| || ||||||||||| ||
Sbjct 913889 AACATCCAAAAGGAATCTACACTTCACTTAGTCTTGAGATTGAGAGGTGG 913938
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | || || || || || || || ||| | || || | ||||| || |
Sbjct 913940 ATGCAAATCTTCGTCAAGACTTTGACAGGCAAAACCATCACTTTGGAAGTTGAATCTTCT 913999
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||| || || | || || |||||| ||||| ||||| || ||||| || |||
Sbjct 914000 GACACTATTGACAATGTGAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 914059
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
|| ||| |||||| | || || ||| | ||||| | |||| | ||| || |||
Sbjct 914060 CAAAGATTGATTTTTGCTGGTAAACAATTAGAAGACGGAAGAACTCTATCCGACTACAAC 914119
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|||||||| ||||||||| |||| ||||| || ||||||||||| ||
Sbjct 914120 ATTCAAAAGGAATCTACACTTCACTTAGTCTTGAGATTGAGAGGTGG 914166
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | || || || || || || || || | || || | |||||||| |
Sbjct 914168 ATGCAAATCTTCGTCAAGACTTTGACAGGTAAGACTATCACTTTGGAAGTCGAATCTTCT 914227
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||| || || | || || |||||| || |||||||| || ||||| || |||
Sbjct 914228 GACACTATTGACAATGTGAAGTCTAAGATTCAAGATAAAGAAGGTATTCCTCCAGACCAA 914287
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
|| ||| |||||| | || || ||| | ||||| | |||| | ||| || |||
Sbjct 914288 CAAAGATTGATTTTTGCGGGTAAACAATTAGAAGACGGAAGAACTCTATCCGACTACAAC 914347
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|||||||| ||||||||| |||| ||||| || ||||||||||| ||
Sbjct 914348 ATTCAAAAGGAATCTACACTTCACTTAGTCTTGAGATTGAGAGGTGG 914394
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | || || || || || || || || | || || | |||||||| |
Sbjct 914396 ATGCAAATCTTCGTCAAGACTTTGACAGGTAAGACTATCACTTTGGAAGTCGAATCTTCT 914455
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||| || || | || || |||||| || |||||||| || ||||| || |||
Sbjct 914456 GACACTATTGATAATGTGAAGTCTAAGATTCAAGATAAAGAAGGTATTCCTCCAGACCAA 914515
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
|| ||| |||||| | || || ||| | ||||| | |||| | ||| || |||
Sbjct 914516 CAAAGATTGATTTTTGCGGGTAAACAATTAGAAGACGGAAGAACTCTATCCGACTACAAC 914575
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|||||||| ||||||||| |||| ||||| || ||||||||||| ||
Sbjct 914576 ATTCAAAAGGAATCTACACTTCACTTAGTCTTGAGATTGAGAGGTGG 914622
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | || || || || || || || || | || || | |||||||| |
Sbjct 914624 ATGCAAATCTTCGTCAAGACTTTGACAGGTAAGACTATCACTTTGGAAGTCGAATCTTCT 914683
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||| || || | || || |||||| ||||| ||||| || ||||| || |||
Sbjct 914684 GACACTATTGACAATGTGAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 914743
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
|| ||| |||||| | || |||||| | ||||| | |||| | ||| || |||
Sbjct 914744 CAAAGATTGATTTTTGCTGGTAAGCAATTAGAAGACGGAAGAACTCTATCCGACTACAAC 914803
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|| ||||| ||||| ||| | || || || || || |||||||||||
Sbjct 914804 ATCCAAAAGGAATCCACACTCCACTTGGTCTTGAGGTTGAGAGGAGG 914850
>seq32
Length=1561830
Score = 107 bits (118), Expect = 2e-18
Identities = 378/575 (66%), Gaps = 33/575 (6%)
Strand=Plus/Minus
Query 104602 ACTCGTTTTTCaaaaaaaTTAGTCTTGCCCTCCAGAGAAATATTATTCATAAATTCGAAA 104661
|||| ||||| || ||||| || || || ||| ||||| || | |||||| |||||
Sbjct 411914 ACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTTTCCATAAAGTCGAAT 411855
Query 104662 GGATTCAAAGTC-TTAAAATATTTTTCGTAGCCAAGCTCGATCAACAGTCGATCCGCCAC 104720
|| || | | | || | ||||| | || || | | | || |||| || || ||
Sbjct 411854 GGGTT-AGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGTAGTCTGTCTGCAAC 411796
Query 104721 AAATTCGATGTACTCGCACATAGAATGTGCATTCATGCCCAGCATTGCGACGGGTAAAGC 104780
|||||||| ||| | | ||| ||| || ||||| |||| | | ||||||| |||
Sbjct 411795 AAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGAGAAACGGGTAGAGC 411736
Query 104781 GTTAGTaaaaaaa-TCTTTCTCGATGTCCACGGCTTCCTTAAACATG--TTCAGCAC-CT 104836
|| | || | ||||| ||||| || || ||||| | | || ||| || ||
Sbjct 411735 GTCGATGAAGTATCTCTTT-TCGATCTCAACAGCTTCTGTGATGATTCTTTCGACAATCT 411677
Query 104837 TGCTTTCAGAAAGCTTGTCCTCTTTGGCAATATATTTGTTGTAATAG-AGGCAGGCAAAG 104895
| || | |||||| |||| ||| || || ||||| | |||||||||
Sbjct 411676 TTGGATCTG---GCTTGT--TCTT---CAAA-----TGATGGAATAGCAAACAGGCAAAG 411630
Query 104896 TCTGTGTGCAATCCTTCATCTCTAGAAATAAGTTCGTTGCTGTAAGTCAAGCCAGGTA-G 104954
|| |||||||| ||||||||||| |||| | |||||| | | ||||| || || |
Sbjct 411629 TCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACCTGGCATC 411570
Query 104955 AGCCCCtttttttGTGTCTTTAATATAGTAGATGGCAGCAAAACTACCGGAGAAAAAGAC 105014
| ||||| | |||| || || ||||||||||||| ||| |||||||| ||
Sbjct 411569 AAACCCTTCT------TCTTCAA-CCAGAAGATGGCAGCAAAGGAACCAGAGAAAAACAC 411517
Query 105015 ACCTTCGACGATGGCAAACGCGACCATGCGTTCGGCGAATGTAGCAGTTTGACTT--TCA 105072
|||||| ||| || ||||| |||| | ||| ||| | ||| || | | | |
Sbjct 411516 ACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGCG--TATAGGGCTTCGTCATCACGA 411459
Query 105073 ATCCATTTCTGAGCCCATGTTGCCTTCCGTTTGACGCTATCAATGTGCTCGATGGCATTC 105132
|||||| | |||||| ||||| ||||| |||| || |||||||||
Sbjct 411458 ATCCATCTAATGGCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTC 411399
Query 105133 AAAATCCTGTCGCATTCCTGAGGATCTTTAATGTA 105167
|| | |||| ||||| |||||| || |||||
Sbjct 411398 AACAAGAAGTCGTGTTCCTTAGGATCCTTGATGTA 411364
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429935811365580
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |