Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F000747785.1_202014-06- 30] 36 sequences; 11,165,408 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq33 111 1e-19 seq19 89.7 4e-13 >seq33 Length=1695378 Score = 111 bits (122), Expect = 1e-19 Identities = 170/240 (71%), Gaps = 2/240 (1%) Strand=Plus/Plus Query 115274 AAGAGATTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAA 115333 |||| ||||||||||||||| |||||||| ||| | || || || ||||| || | ||| Sbjct 913700 AAGACATTAAAAATGCAAATCTTTGTCAAGACGTTAACAGGTAAGACCATCACTTTGGAA 913759 Query 115334 ACGGAGTCCAGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGT 115392 || || |||||| ||| |||| || || || || ||||| ||||| | Sbjct 913760 GTTGAATCTTCTGACACTATTG-ACAATGTGAAGTCTAAGATCCAAGATAAGGAAGGTAT 913818 Query 115393 CCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCAT 115452 || || || |||||| | |||| |||||| || ||||||||||| | | ||| | Sbjct 913819 TCCTCCAGACCAACAAAGATTGATTTTTGCGGGTAAGCAATTAGAAGACGGAAGAACTCT 913878 Query 115453 GGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 |||| || ||||| ||||| || ||||| | || | || ||||||||| |||| || Sbjct 913879 ATCCGACTACAACATCCAAAAGGAATCTACACTTCACTTAGTCTTGAGATTGAGAGGTGG 913938 Score = 98.7 bits (108), Expect = 8e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| || ||||| || | || || || || || || | ||| || || Sbjct 914168 ATGCAAATCTTCGTCAAGACTTTGACAGGTAAGACTATCACTTTGGAAGTCGAATCTTCT 914227 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| ||| |||| || || || ||| ||||||||||| | || || || Sbjct 914228 GACACTATTG-ACAATGTGAAGTCTAAGATTCAAGATAAAGAAGGTATTCCTCCAGACCA 914286 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||||| | |||| |||||| |||||||||||||| | | ||| | |||| || || Sbjct 914287 ACAAAGATTGATTTTTGCGGGTAAACAATTAGAAGACGGAAGAACTCTATCCGACTACAA 914346 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||||||| || ||||| | || | || ||||||||| |||| || Sbjct 914347 CATTCAAAAGGAATCTACACTTCACTTAGTCTTGAGATTGAGAGGTGG 914394 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| || ||||| || | || || || || || || | ||| || || Sbjct 914396 ATGCAAATCTTCGTCAAGACTTTGACAGGTAAGACTATCACTTTGGAAGTCGAATCTTCT 914455 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 |||||| ||| | || || || ||| ||||||||||| | || || || Sbjct 914456 GACACTATTGATAATGTGAAGTCTAAGATTCAAGATAAAGAAGGTATTCCTCCAGACCAA 914515 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 |||||| | |||| |||||| |||||||||||||| | | ||| | |||| || ||| Sbjct 914516 CAAAGATTGATTTTTGCGGGTAAACAATTAGAAGACGGAAGAACTCTATCCGACTACAAC 914575 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 |||||||| || ||||| | || | || ||||||||| |||| || Sbjct 914576 ATTCAAAAGGAATCTACACTTCACTTAGTCTTGAGATTGAGAGGTGG 914622 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| || ||||| || | || || |||||||| || | ||| || || Sbjct 913940 ATGCAAATCTTCGTCAAGACTTTGACAGGCAAAACCATCACTTTGGAAGTTGAATCTTCT 913999 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| ||| |||| || || || ||| || || ||||| | || || || Sbjct 914000 GACACTATTG-ACAATGTGAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCA 914058 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||||| | |||| ||| || |||||||||||||| | | ||| | |||| || || Sbjct 914059 ACAAAGATTGATTTTTGCTGGTAAACAATTAGAAGACGGAAGAACTCTATCCGACTACAA 914118 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||||||| || ||||| | || | || ||||||||| |||| || Sbjct 914119 CATTCAAAAGGAATCTACACTTCACTTAGTCTTGAGATTGAGAGGTGG 914166 >seq19 Length=169523 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||||||||| ||||| || || || || || || |||||| | ||| || || | Sbjct 25624 ATGCAAATTTTCGTCAAGACCCTAACTGGTAAGACTATTACCTTGGAAGTCGAATCTTCC 25683 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| || ||||| || || || || || || ||||| | || || || Sbjct 25684 GACACCATT-GACAATGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCA 25742 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||||| | || | ||| || || ||||| ||||||| | ||| || | || || || Sbjct 25743 ACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTACAA 25802 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||| ||||| || ||||| | || |||| ||||||||| |||| || Sbjct 25803 CATCCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGG 25850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425343813380320