Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F000747785.1_202014-06- 30] 36 sequences; 11,165,408 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq33 143 2e-29 >seq33 Length=1695378 Score = 143 bits (158), Expect = 2e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||||||||| || ||| ||||||| | ||||| || || ||| Sbjct 913940 ATGCAAATCTTCGTCAAGACTTTGACAGGCAAAACCATCACTTTGGAAGTTGAATCTTCT 913999 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 |||||||| || ||||| | || | ||| ||||| ||||| ||||| || ||||| Sbjct 914000 GACACTATTGACAATGTGAAGTCTAAGATTCA-AGACAAGGAAGGTATTCCTCCAGACCA 914058 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| | | |||||||| || |||||||||||||| | | ||| | ||| ||||| Sbjct 914059 ACAAAGATTGATTTTTGCTGGTAAACAATTAGAAGACGGAAGAACTCTATCCGACTACAA 914118 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 |||||||| ||||| || || || ||||| | || | ||||| || Sbjct 914119 CATTCAAAAGGAATCTACACTTCACTTAGTCTTGAGATTGAGAGGTGG 914166 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||||||||| ||||| | ||||| | ||||| || || ||| Sbjct 914168 ATGCAAATCTTCGTCAAGACTTTGACAGGTAAGACTATCACTTTGGAAGTCGAATCTTCT 914227 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 |||||||| || ||||| | || | ||| || |||||||| ||||| || ||||| Sbjct 914228 GACACTATTGACAATGTGAAGTCTAAGATTCA-AGATAAAGAAGGTATTCCTCCAGACCA 914286 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| | | |||||||| || |||||||||||||| | | ||| | ||| ||||| Sbjct 914287 ACAAAGATTGATTTTTGCGGGTAAACAATTAGAAGACGGAAGAACTCTATCCGACTACAA 914346 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 |||||||| ||||| || || || ||||| | || | ||||| || Sbjct 914347 CATTCAAAAGGAATCTACACTTCACTTAGTCTTGAGATTGAGAGGTGG 914394 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||||||||| ||||| | ||||| | ||||| || || ||| Sbjct 914396 ATGCAAATCTTCGTCAAGACTTTGACAGGTAAGACTATCACTTTGGAAGTCGAATCTTCT 914455 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 |||||||| || ||||| | || | ||| || |||||||| ||||| || ||||| Sbjct 914456 GACACTATTGATAATGTGAAGTCTAAGATTCA-AGATAAAGAAGGTATTCCTCCAGACCA 914514 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| | | |||||||| || |||||||||||||| | | ||| | ||| ||||| Sbjct 914515 ACAAAGATTGATTTTTGCGGGTAAACAATTAGAAGACGGAAGAACTCTATCCGACTACAA 914574 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 |||||||| ||||| || || || ||||| | || | ||||| || Sbjct 914575 CATTCAAAAGGAATCTACACTTCACTTAGTCTTGAGATTGAGAGGTGG 914622 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||||||||| ||||| | ||||| | ||||| || || ||| Sbjct 914624 ATGCAAATCTTCGTCAAGACTTTGACAGGTAAGACTATCACTTTGGAAGTCGAATCTTCT 914683 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 |||||||| || ||||| | || | ||| ||||| ||||| ||||| || ||||| Sbjct 914684 GACACTATTGACAATGTGAAGTCTAAGATTCA-AGACAAGGAAGGTATTCCTCCAGACCA 914742 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| | | |||||||| || || ||||||||||| | | ||| | ||| ||||| Sbjct 914743 ACAAAGATTGATTTTTGCTGGTAAGCAATTAGAAGACGGAAGAACTCTATCCGACTACAA 914802 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || ||||| |||||||| || || || || | ||| | |||||||| Sbjct 914803 CATCCAAAAGGAATCCACACTCCACTTGGTCTTGAGGTTGAGAGGAGG 914850 Score = 129 bits (142), Expect = 5e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 24995 AACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTC 25054 || ||||||||| ||||| ||||| || || ||||| ||||||| | ||||| || || Sbjct 913708 AAAAATGCAAATCTTTGTCAAGACGTTAACAGGTAAGACCATCACTTTGGAAGTTGAATC 913767 Query 25055 GTCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||||||||| || ||||| || ||| || || ||||| ||||| || || Sbjct 913768 TTCTGACACTATTGACAATGTGAAGTCTAAGATCCAAGATAAGGAAGGTATTCCTCCAGA 913827 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 |||||| | | |||||||| || || ||||||||||| | | ||| | ||| || Sbjct 913828 CCAACAAAGATTGATTTTTGCGGGTAAGCAATTAGAAGACGGAAGAACTCTATCCGACTA 913887 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||| || ||||| ||||| || || || ||||| | || | ||||| || Sbjct 913888 CAACATCCAAAAGGAATCTACACTTCACTTAGTCTTGAGATTGAGAGGTGG 913938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327809877340