Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F000747785.1_202014-06- 30] 36 sequences; 11,165,408 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq32 206 3e-48 >seq32 Length=1561830 Score = 206 bits (228), Expect = 3e-48 Identities = 599/907 (66%), Gaps = 29/907 (3%) Strand=Plus/Minus Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849 ||| |||||| |||||||| || ||| | ||||| |||||||| || || || | Sbjct 411942 CATGACACCAGCCTTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGC 411883 Query 92850 CAAAGATATCGAATTCACTA--GT-GATTGGATTCTTGGCGTTATAATA---CTTTTCAC 92903 ||| || || | ||| || || || ||| || || |||| || || ||| | || Sbjct 411882 CAAGGAAAT-GTTTTCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTAC 411824 Query 92904 CGAT--CAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATC 92961 | | |||| || || ||| || || |||||||| | ||| || ||||||||| Sbjct 411823 CTAAAGCAAC-----CAGTAGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATC 411769 Query 92962 ACAATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAA-TCTTTCTCGATTA 93020 | ||||| || | ||| || |||||||||||| | ||| | ||||| ||||| Sbjct 411768 AGCGTTCATACCCAATAGAGAAACGGGTAGAGCGTCGATGAAGTATCTCTTT-TCGATCT 411710 Query 93021 CAACGGCTTCTTTCAAGATTTCTATTACTCTACTATTTGG---TGGTTT-TTGTACGACA 93076 |||| |||||| | | |||| | || | | ||||| ||| || || | | | | Sbjct 411709 CAACAGCTTCTGTGATGATTCTTTCGAC---AATCTTTGGATCTGGCTTGTTCTTCAA-A 411654 Query 93077 TAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCA 93136 | || | | | || || ||||||||||| || |||||||| |||| | ||||| || Sbjct 411653 TGATGGAATAGCAAACAGGCAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCG 411594 Query 93137 TTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAA 93196 || ||| || |||||||| | || || ||||| | ||| || || | |||||| Sbjct 411593 TTTGAGAAGGTCAAACCTGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCAAAG 411534 Query 93197 CTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTT 93256 |||||| ||||| | |||||||||||| || || || || | | ||| || | Sbjct 411533 GAACCAGAGAAAAACACACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGCGTATAGG 411474 Query 93257 GCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGT 93316 || | | | |||||| | | ||||| | || |||| || || || | Sbjct 411473 GCTTCGTCATCACGAATCCATCTAATGGCCCATTGAGCCTTTTCTTTGATTTGTGGAATG 411414 Query 93317 GTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATT 93376 ||||| || || || || | | | || | || | | ||| ||||| || || || Sbjct 411413 GTTTCAATGGCATTCAACAAGAAGTCGTGTTCCTTAGGATCCTTGATGTAAGTGTCAATC 411354 Query 93377 AACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACAT 93436 |||| ||||| |||| || || | || ||||| ||||||||| ||||||||||| Sbjct 411353 AACAACGAATAAGTTTCGGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACAC 411294 Query 93437 CTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATA 93496 | ||||| | || ||||| || ||| || | || || | ||||| || || ||| Sbjct 411293 TTGGCTTCTGGAATTTGCACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATA 411234 Query 93497 CCATCGGATGCTGCaaaaaaaGCCAATA-TATGCTTTATAAAATGTTTCTCATCATCTTT 93555 |||||||| || ||||| || || | | | || || ||| | |||| | || || Sbjct 411233 CCATCGGAAGCAGCAAAGAACGCAAGCACTCTG-GAGATGAAAAATCTCTCGTTCTCGTT 411175 Query 93556 AA---GCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAA 93612 | || | ||| || ||||| || || | ||||| |||||| |||||||||| Sbjct 411174 CATTCTGTTGTTCCAGTCATGAAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAA 411115 Query 93613 CGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGAC 93672 || || || ||| | || || ||||| || || || || | ||||| || | || Sbjct 411114 AGAGGCCTCGGCTCTCTTATAAGCCTCCCAGATTTCGTGGTACTTGATTGGGAAAAGCAC 411055 Query 93673 AAAACGA 93679 ||||||| Sbjct 411054 AAAACGA 411048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860549412640