Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F000747785.1_202014-06-
30] 36 sequences; 11,165,408 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq33 132 4e-26
seq19 118 9e-22
seq32 109 5e-19
>seq33
Length=1695378
Score = 132 bits (146), Expect = 4e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || || || ||||| || || ||||| ||||| | ||||| ||| | |
Sbjct 913940 ATGCAAATCTTCGTCAAGACTTTGACAGGCAAAACCATCACTTTGGAAGTTGAATCTTCT 913999
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || | || || |||||||||||||| |||||||| || || |||
Sbjct 914000 GACACTATTGACAATGTGAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 914059
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || ||||| || ||||| ||||| || | || | ||||| ||||||
Sbjct 914060 CAAAGATTGATTTTTGCTGGTAAACAATTAGAAGACGGAAGAACTCTATCCGACTACAAC 914119
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|||||||| ||||| || | || ||||| ||| ||||| | || |||
Sbjct 914120 ATTCAAAAGGAATCTACACTTCACTTAGTCTTGAGATTGAGAGGTGGT 914167
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || || || ||||| || ||||| || ||||| | ||||| ||| | |
Sbjct 914168 ATGCAAATCTTCGTCAAGACTTTGACAGGTAAGACTATCACTTTGGAAGTCGAATCTTCT 914227
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || | || || |||||||| || || |||||||| || || |||
Sbjct 914228 GACACTATTGACAATGTGAAGTCTAAGATTCAAGATAAAGAAGGTATTCCTCCAGACCAA 914287
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || ||||| || ||||| ||||| || | || | ||||| ||||||
Sbjct 914288 CAAAGATTGATTTTTGCGGGTAAACAATTAGAAGACGGAAGAACTCTATCCGACTACAAC 914347
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|||||||| ||||| || | || ||||| ||| ||||| | || |||
Sbjct 914348 ATTCAAAAGGAATCTACACTTCACTTAGTCTTGAGATTGAGAGGTGGT 914395
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || || || ||||| || ||||| || ||||| | ||||| ||| | |
Sbjct 914624 ATGCAAATCTTCGTCAAGACTTTGACAGGTAAGACTATCACTTTGGAAGTCGAATCTTCT 914683
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || | || || |||||||||||||| |||||||| || || |||
Sbjct 914684 GACACTATTGACAATGTGAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 914743
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || ||||| || || || ||||| || | || | ||||| ||||||
Sbjct 914744 CAAAGATTGATTTTTGCTGGTAAGCAATTAGAAGACGGAAGAACTCTATCCGACTACAAC 914803
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| ||||| |||||||| | || || || ||| | ||| | ||||||
Sbjct 914804 ATCCAAAAGGAATCCACACTCCACTTGGTCTTGAGGTTGAGAGGAGGT 914851
Score = 118 bits (130), Expect = 9e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || || || ||||| || ||||| || ||||| | ||||| ||| | |
Sbjct 914396 ATGCAAATCTTCGTCAAGACTTTGACAGGTAAGACTATCACTTTGGAAGTCGAATCTTCT 914455
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || || | || || |||||||| || || |||||||| || || |||
Sbjct 914456 GACACTATTGATAATGTGAAGTCTAAGATTCAAGATAAAGAAGGTATTCCTCCAGACCAA 914515
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || ||||| || ||||| ||||| || | || | ||||| ||||||
Sbjct 914516 CAAAGATTGATTTTTGCGGGTAAACAATTAGAAGACGGAAGAACTCTATCCGACTACAAC 914575
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|||||||| ||||| || | || ||||| ||| ||||| | || |||
Sbjct 914576 ATTCAAAAGGAATCTACACTTCACTTAGTCTTGAGATTGAGAGGTGGT 914623
>seq19
Length=169523
Score = 118 bits (130), Expect = 9e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || || || |||| ||||| || | || | ||||| ||| | ||
Sbjct 25624 ATGCAAATTTTCGTCAAGACCCTAACTGGTAAGACTATTACCTTGGAAGTCGAATCTTCC 25683
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| || |||| || || ||||||||||| |||||||| || || |||
Sbjct 25684 GACACCATTGACAATGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAA 25743
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || ||||| || || || || || ||| | || | || || ||||||
Sbjct 25744 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTACAAC 25803
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| ||||| ||||| ||| | || || || ||| ||||| | || |||
Sbjct 25804 ATCCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGGT 25851
>seq32
Length=1561830
Score = 109 bits (120), Expect = 5e-19
Identities = 149/208 (72%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286
||| || || || || || ||||| || ||||| | ||||| ||| | | || ||| |
Sbjct 1515217 TTTCGTCAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCTGACACCAT 1515158
Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346
||| || |||| || |||||||||||||| ||||||||||| || |||||| | |
Sbjct 1515157 TGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAACAAAGATT 1515098
Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406
|| ||||| || || || || || || | || | || || |||||||| |||||
Sbjct 1515097 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTTTGTCTGACTACAACATCCAAAA 1515038
Query 22407 AGAATCCACCATACATTTAGTTTTGCGA 22434
||||||||| | || || || ||| ||
Sbjct 1515037 GGAATCCACCCTTCACTTGGTCTTGAGA 1515010
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727815844340
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |