Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F000747785.1_202014-06- 30] 36 sequences; 11,165,408 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq32 183 6e-41 seq33 181 2e-40 seq19 181 2e-40 >seq32 Length=1561830 Score = 183 bits (202), Expect = 6e-41 Identities = 163/204 (80%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| || ||||| || ||||||||||| || || || | || || || || Sbjct 1515013 CAAGACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCGTC 1515072 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || ||||| || || || || | |||||||||||| |||||||| ||||||||||| Sbjct 1515073 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTC 1515132 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||||||||| | |||||| || |||||||| | ||||| |||||||| |||||||| Sbjct 1515133 TTGAATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCGACTTCCAAAGTGATGGT 1515192 Query 68429 TTTTCCCGTGAGGGTCTTGACGAA 68452 || || || | |||||||||||| Sbjct 1515193 CTTACCAGTCAAGGTCTTGACGAA 1515216 >seq33 Length=1695378 Score = 181 bits (200), Expect = 2e-40 Identities = 168/213 (79%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| || ||||| || ||||||||||| || ||||| || || || || || Sbjct 914836 CAAGACCAAGTGGAGTGTGGATTCCTTTTGGATGTTGTAGTCGGATAGAGTTCTTCCGTC 914777 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 |||||| ||||| || || || || | |||||||||||| || ||||| ||||||||||| Sbjct 914776 TTCTAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTC 914717 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||||||||| | ||| || || || ||||| | ||||| |||||||| ||||| || Sbjct 914716 TTGAATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCGACTTCCAAAGTGATAGT 914657 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | ||||||||||| || ||||| Sbjct 914656 CTTACCTGTCAAAGTCTTGACGAAGATTTGCAT 914624 Score = 172 bits (190), Expect = 1e-37 Identities = 166/213 (78%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| || ||||| || || || || ||||| ||||| || ||||| || || || || || Sbjct 914152 CAAGACTAAGTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCGGATAGAGTTCTTCCGTC 914093 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 |||||| || || || || || || | |||||||||||| || ||||| ||||||||||| Sbjct 914092 TTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTC 914033 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||||||||| | ||| || || || ||||| | ||||| |||||||| |||||||| Sbjct 914032 TTGAATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGT 913973 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||| || || | ||||||||||| || ||||| Sbjct 913972 TTTGCCTGTCAAAGTCTTGACGAAGATTTGCAT 913940 Score = 165 bits (182), Expect = 2e-35 Identities = 165/214 (77%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| || ||||| || || || || ||||||||||| || ||||| || || || || || Sbjct 913924 CAAGACTAAGTGAAGTGTAGATTCCTTTTGGATGTTGTAGTCGGATAGAGTTCTTCCGTC 913865 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 |||||| ||||| || || || || | |||||||||||| || ||||| |||||||| || Sbjct 913864 TTCTAATTGCTTACCCGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTATC 913805 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| ||||| | ||| || || || ||||| | ||||| |||||||| |||||||| Sbjct 913804 TTGGATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGT 913745 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || || || | |||||||| || || |||||| Sbjct 913744 CTTACCTGTTAACGTCTTGACAAAGATTTGCATT 913711 Score = 154 bits (170), Expect = 3e-32 Identities = 162/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| || ||||| || || || || ||||| ||||| || ||||| || || || || || Sbjct 914380 CAAGACTAAGTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCGGATAGAGTTCTTCCGTC 914321 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 |||||| || || || || || || | |||||||||||| || ||||| ||||| || || Sbjct 914320 TTCTAATTGTTTACCCGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCTTTATC 914261 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||||||||| | ||| || || || ||||| | ||||| |||||||| ||||| || Sbjct 914260 TTGAATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCGACTTCCAAAGTGATAGT 914201 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | ||||||||||| || ||||| Sbjct 914200 CTTACCTGTCAAAGTCTTGACGAAGATTTGCAT 914168 Score = 154 bits (170), Expect = 3e-32 Identities = 162/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| || ||||| || || || || ||||| ||||| || ||||| || || || || || Sbjct 914608 CAAGACTAAGTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCGGATAGAGTTCTTCCGTC 914549 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 |||||| || || || || || || | |||||||||||| || ||||| ||||| || || Sbjct 914548 TTCTAATTGTTTACCCGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCTTTATC 914489 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||||||||| | ||| || || || ||||| | ||||| |||||||| ||||| || Sbjct 914488 TTGAATCTTAGACTTCACATTATCAATAGTGTCAGAAGATTCGACTTCCAAAGTGATAGT 914429 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | ||||||||||| || ||||| Sbjct 914428 CTTACCTGTCAAAGTCTTGACGAAGATTTGCAT 914396 >seq19 Length=169523 Score = 181 bits (200), Expect = 2e-40 Identities = 168/213 (79%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| || || || || ||||||||||| || || || | || || ||||| Sbjct 25836 CAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATC 25777 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || ||||| || || || || | |||||||||||| || ||||| ||||||||||| Sbjct 25776 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTC 25717 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| ||||| | |||||| || |||||||| | ||||| ||||||||||| || || Sbjct 25716 TTGGATCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAATAGT 25657 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || |||||||||||||| || ||||| Sbjct 25656 CTTACCAGTTAGGGTCTTGACGAAAATTTGCAT 25624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921621985269920