Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F000747785.1_202014-06- 30] 36 sequences; 11,165,408 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq33 118 3e-21 >seq33 Length=1695378 Score = 118 bits (130), Expect = 3e-21 Identities = 144/195 (74%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| ||||| || || ||||||| || || | |||||||||||||||||| || || || Sbjct 914359 TTCCTTTTGAATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCTAATTGTTTACCCGCAAA 914300 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 |||| | ||||| ||||| || ||||||||||| || || || | ||||| Sbjct 914299 AATCAATCTTTGTTGG---TCTGGAGGAATACCTTCTTTATCTTGAATCTTAGACTTCAC 914243 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 || || |||| || ||||| ||||| | ||||| ||||| || |||| |||||| Sbjct 914242 ATTGTCAATAGTGTCAGAAGATTCGACTTCCAAAGTGATAGTCTTACCTGTCAAAGTCTT 914183 Query 288459 GACGAATATCTGCAT 288473 |||||| || ||||| Sbjct 914182 GACGAAGATTTGCAT 914168 Score = 118 bits (130), Expect = 3e-21 Identities = 144/195 (74%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| ||||| || || ||||||| || || | |||||||||||||||||| || || || Sbjct 914587 TTCCTTTTGAATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCTAATTGTTTACCCGCAAA 914528 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 |||| | ||||| ||||| || ||||||||||| || || || | ||||| Sbjct 914527 AATCAATCTTTGTTGG---TCTGGAGGAATACCTTCTTTATCTTGAATCTTAGACTTCAC 914471 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 || || |||| || ||||| ||||| | ||||| ||||| || |||| |||||| Sbjct 914470 ATTATCAATAGTGTCAGAAGATTCGACTTCCAAAGTGATAGTCTTACCTGTCAAAGTCTT 914411 Query 288459 GACGAATATCTGCAT 288473 |||||| || ||||| Sbjct 914410 GACGAAGATTTGCAT 914396 Score = 109 bits (120), Expect = 1e-18 Identities = 142/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| || ||||||| || || | ||||||||||||||| || || || || Sbjct 914815 TTCCTTTTGGATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCTAATTGCTTACCAGCAAA 914756 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 |||| | ||||| ||||| || ||||| || || || || || | ||||| Sbjct 914755 AATCAATCTTTGTTGG---TCTGGAGGAATACCTTCCTTGTCTTGAATCTTAGACTTCAC 914699 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 || || |||| || ||||| ||||| | ||||| ||||| || |||| |||||| Sbjct 914698 ATTGTCAATAGTGTCAGAAGATTCGACTTCCAAAGTGATAGTCTTACCTGTCAAAGTCTT 914639 Query 288459 GACGAATATCTGCAT 288473 |||||| || ||||| Sbjct 914638 GACGAAGATTTGCAT 914624 Score = 107 bits (118), Expect = 5e-18 Identities = 142/196 (72%), Gaps = 6/196 (3%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| || ||||||| || || | ||||||||||||||| || || || || Sbjct 913903 TTCCTTTTGGATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCTAATTGCTTACCCGCAAA 913844 Query 288342 GATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 |||| | ||||| ||| || || ||||| ||||| ||||| || | ||||| Sbjct 913843 AATCAATCTTTGTTG---GTCTGGAGGAATACCTTCCTTATCTTGGATCTTAGACTTCAC 913787 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 || || |||| || ||||| ||||| | ||||| ||||| || || | ||||| Sbjct 913786 ATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCTGTTAACGTCTT 913727 Query 288459 GACGAATATCTGCATT 288474 ||| || || |||||| Sbjct 913726 GACAAAGATTTGCATT 913711 Score = 105 bits (116), Expect = 2e-17 Identities = 141/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| ||||| || || ||||||| || || | |||||||||||||||||| || || || Sbjct 914131 TTCCTTTTGAATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCTAATTGTTTACCAGCAAA 914072 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 |||| | ||||| ||||| || ||||| || || || || || | ||||| Sbjct 914071 AATCAATCTTTGTTGG---TCTGGAGGAATACCTTCCTTGTCTTGAATCTTAGACTTCAC 914015 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 || || |||| || ||||| ||||| | ||||| || || || |||| |||||| Sbjct 914014 ATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTTTTGCCTGTCAAAGTCTT 913955 Query 288459 GACGAATATCTGCAT 288473 |||||| || ||||| Sbjct 913954 GACGAAGATTTGCAT 913940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179653855884408