Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F000747785.1_202014-06-
30] 36 sequences; 11,165,408 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq33 118 3e-21
>seq33
Length=1695378
Score = 118 bits (130), Expect = 3e-21
Identities = 144/195 (74%), Gaps = 6/195 (3%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| ||||| || || ||||||| || || | |||||||||||||||||| || || ||
Sbjct 914359 TTCCTTTTGAATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCTAATTGTTTACCCGCAAA 914300
Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398
|||| | ||||| ||||| || ||||||||||| || || || | |||||
Sbjct 914299 AATCAATCTTTGTTGG---TCTGGAGGAATACCTTCTTTATCTTGAATCTTAGACTTCAC 914243
Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458
|| || |||| || ||||| ||||| | ||||| ||||| || |||| ||||||
Sbjct 914242 ATTGTCAATAGTGTCAGAAGATTCGACTTCCAAAGTGATAGTCTTACCTGTCAAAGTCTT 914183
Query 288459 GACGAATATCTGCAT 288473
|||||| || |||||
Sbjct 914182 GACGAAGATTTGCAT 914168
Score = 118 bits (130), Expect = 3e-21
Identities = 144/195 (74%), Gaps = 6/195 (3%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| ||||| || || ||||||| || || | |||||||||||||||||| || || ||
Sbjct 914587 TTCCTTTTGAATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCTAATTGTTTACCCGCAAA 914528
Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398
|||| | ||||| ||||| || ||||||||||| || || || | |||||
Sbjct 914527 AATCAATCTTTGTTGG---TCTGGAGGAATACCTTCTTTATCTTGAATCTTAGACTTCAC 914471
Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458
|| || |||| || ||||| ||||| | ||||| ||||| || |||| ||||||
Sbjct 914470 ATTATCAATAGTGTCAGAAGATTCGACTTCCAAAGTGATAGTCTTACCTGTCAAAGTCTT 914411
Query 288459 GACGAATATCTGCAT 288473
|||||| || |||||
Sbjct 914410 GACGAAGATTTGCAT 914396
Score = 109 bits (120), Expect = 1e-18
Identities = 142/195 (73%), Gaps = 6/195 (3%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| |||||||| || ||||||| || || | ||||||||||||||| || || || ||
Sbjct 914815 TTCCTTTTGGATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCTAATTGCTTACCAGCAAA 914756
Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398
|||| | ||||| ||||| || ||||| || || || || || | |||||
Sbjct 914755 AATCAATCTTTGTTGG---TCTGGAGGAATACCTTCCTTGTCTTGAATCTTAGACTTCAC 914699
Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458
|| || |||| || ||||| ||||| | ||||| ||||| || |||| ||||||
Sbjct 914698 ATTGTCAATAGTGTCAGAAGATTCGACTTCCAAAGTGATAGTCTTACCTGTCAAAGTCTT 914639
Query 288459 GACGAATATCTGCAT 288473
|||||| || |||||
Sbjct 914638 GACGAAGATTTGCAT 914624
Score = 107 bits (118), Expect = 5e-18
Identities = 142/196 (72%), Gaps = 6/196 (3%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| |||||||| || ||||||| || || | ||||||||||||||| || || || ||
Sbjct 913903 TTCCTTTTGGATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCTAATTGCTTACCCGCAAA 913844
Query 288342 GATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398
|||| | ||||| ||| || || ||||| ||||| ||||| || | |||||
Sbjct 913843 AATCAATCTTTGTTG---GTCTGGAGGAATACCTTCCTTATCTTGGATCTTAGACTTCAC 913787
Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458
|| || |||| || ||||| ||||| | ||||| ||||| || || | |||||
Sbjct 913786 ATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCTGTTAACGTCTT 913727
Query 288459 GACGAATATCTGCATT 288474
||| || || ||||||
Sbjct 913726 GACAAAGATTTGCATT 913711
Score = 105 bits (116), Expect = 2e-17
Identities = 141/195 (72%), Gaps = 6/195 (3%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| ||||| || || ||||||| || || | |||||||||||||||||| || || ||
Sbjct 914131 TTCCTTTTGAATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCTAATTGTTTACCAGCAAA 914072
Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398
|||| | ||||| ||||| || ||||| || || || || || | |||||
Sbjct 914071 AATCAATCTTTGTTGG---TCTGGAGGAATACCTTCCTTGTCTTGAATCTTAGACTTCAC 914015
Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458
|| || |||| || ||||| ||||| | ||||| || || || |||| ||||||
Sbjct 914014 ATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTTTTGCCTGTCAAAGTCTT 913955
Query 288459 GACGAATATCTGCAT 288473
|||||| || |||||
Sbjct 913954 GACGAAGATTTGCAT 913940
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179653855884408
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |