Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F000747785.1_202014-06- 30] 36 sequences; 11,165,408 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq33 109 5e-19 seq2 89.7 5e-13 >seq33 Length=1695378 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| | |||| |||| || ||||| |||||||||||||| || | Sbjct 914167 ACCACCTCTCAATCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCGGA 914108 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || | ||||||| | || || || ||| |||| | | || ||||| ||||| Sbjct 914107 TAGAGTTCTTCCGTCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGG 914048 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || ||||| || || ||| ||| || | || ||| | || || Sbjct 914047 AATACCTTCCTTGTCTTGAATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCAAC 913988 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | ||| | ||| ||||| |||||||| || ||||| |||||||| Sbjct 913987 TTCCAAAGTGATGGTTTTGCCTGTCAAAGTCTTGACGAAGATTTGCAT 913940 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| | |||| |||| || ||||| |||||||||||||| || | Sbjct 914395 ACCACCTCTCAATCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCGGA 914336 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || | ||||||| | || || || ||| |||| | | || ||||| ||||| Sbjct 914335 TAGAGTTCTTCCGTCTTCTAATTGTTTACCCGCAAAAATCAATCTTTGTTGGTCTGGAGG 914276 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| |||||||| ||||| || || ||| ||| || | || ||| | || || Sbjct 914275 AATACCTTCTTTATCTTGAATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCGAC 914216 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | ||| | ||||| || |||||||| || ||||| |||||||| Sbjct 914215 TTCCAAAGTGATAGTCTTACCTGTCAAAGTCTTGACGAAGATTTGCAT 914168 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| | |||| |||| || ||||| |||||||||||||| || | Sbjct 914623 ACCACCTCTCAATCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCGGA 914564 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || | ||||||| | || || || ||| |||| | | || ||||| ||||| Sbjct 914563 TAGAGTTCTTCCGTCTTCTAATTGTTTACCCGCAAAAATCAATCTTTGTTGGTCTGGAGG 914504 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| |||||||| ||||| || || ||| ||| || | || ||| | || || Sbjct 914503 AATACCTTCTTTATCTTGAATCTTAGACTTCACATTATCAATAGTGTCAGAAGATTCGAC 914444 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | ||| | ||||| || |||||||| || ||||| |||||||| Sbjct 914443 TTCCAAAGTGATAGTCTTACCTGTCAAAGTCTTGACGAAGATTTGCAT 914396 Score = 102 bits (112), Expect = 8e-17 Identities = 166/238 (70%), Gaps = 2/238 (1%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| | |||| |||| || ||||| ||||| |||||||| || | Sbjct 913939 ACCACCTCTCAATCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGGATGTTGTAGTCGGA 913880 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || | ||||||| | ||||| || ||| |||| | | || ||||| ||||| Sbjct 913879 TAGAGTTCTTCCGTCTTCTAATTGCTTACCCGCAAAAATCAATCTTTGTTGGTCTGGAGG 913820 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || ||||| || || ||| ||| || | || ||| | || || Sbjct 913819 AATACCTTCCTTATCTTGGATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCAAC 913760 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTTAATAATG 64453 ||| | ||| | |||||| || || || || || || || ||||||||||| ||||| Sbjct 913759 TTCCAAAGTGATGGTCTTACCTGTTAACGTCTTGACAAAGATTTGCATTTT--TAATG 913704 >seq2 Length=945054 Score = 89.7 bits (98), Expect = 5e-13 Identities = 167/243 (69%), Gaps = 2/243 (1%) Strand=Plus/Plus Query 155211 GCACAGTCCGCCAAAGTTTCGTACATTCCTTTGATGCTGTCTTCTTTCAACGTCAACAAG 155270 ||||| ||| |||||| ||||| || |||| ||| ||||| |||| | || | | Sbjct 341226 GCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAATCTTCCTTCATGGCCACTAGG 341285 Query 155271 AAACACGAAGATAATTGAGGTTGAGGGCAGCCGGCCGCAAATAATGTAGGACTAGCGTGT 155330 ||||| || || | ||| || ||||| || || || | |||||| ||||||| Sbjct 341286 AAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAAAAGTGTAGGCGAAGCGTGT 341345 Query 155331 GTAAAC-ATTTTGTTGGCGGTTAAGTTGTAAGTTTCGATGGCGGCGTCAATGTCACGACC 155389 || || || || | | ||| |||||||||||| | | ||||| || | ||| Sbjct 341346 GTGAAGTATCTTAGAGACA-TTAGGTTGTAAGTTTCCAAAACCTTTTCAATATCTCTACC 341404 Query 155390 GTGTATACCGATCGCCACGCGCATCAGCATGTGTTGAATGCGCTCCGCAACGCGGCCGTT 155449 ||| ||||||| ||||| | ||| | |||||||||| || || ||||| ||||| Sbjct 341405 GTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGACGTTCAGCAACCTTACCGTT 341464 Query 155450 GAT 155452 ||| Sbjct 341465 GAT 341467 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644575159840