Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F000747785.1_202014-06-
30] 36 sequences; 11,165,408 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq19 123 2e-23
seq33 109 5e-19
seq32 95.1 1e-14
>seq19
Length=169523
Score = 123 bits (136), Expect = 2e-23
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | || || || |||||||||||||| || || || | ||| || |
Sbjct 25838 CTCAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCA 25779
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||||||| || || || | ||||||| ||| ||||| || ||||| ||||| ||
Sbjct 25778 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTG 25719
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
||||| || || |||| || | |||||||||||| |||||||| | ||||
Sbjct 25718 TCTTGGATCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAATA 25659
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATCGC 45343
|| || || ||||| || || || ||||||||||| ||
Sbjct 25658 GTCTTACCAGTTAGGGTCTTGACGAAAATTTGCATGGC 25621
>seq33
Length=1695378
Score = 109 bits (120), Expect = 5e-19
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| |||| || || || ||||||||||| || || || ||| | ||| |
Sbjct 914382 CTCAAGACTAAGTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCGGATAGAGTTCTTCCG 914323
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| || |||||||| || || | ||||||| ||| ||||| || ||||| |||||||||
Sbjct 914322 TCTTCTAATTGTTTACCCGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCTTTA 914263
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
|||||||| || || | || | ||||| ||||| |||||||| | ||| |
Sbjct 914262 TCTTGAATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCGACTTCCAAAGTGATA 914203
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || || | ||| || || || ||||||||
Sbjct 914202 GTCTTACCTGTCAAAGTCTTGACGAAGATTTGCAT 914168
Score = 109 bits (120), Expect = 5e-19
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| |||| || || || ||||||||||| || || || ||| | ||| |
Sbjct 914610 CTCAAGACTAAGTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCGGATAGAGTTCTTCCG 914551
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| || |||||||| || || | ||||||| ||| ||||| || ||||| |||||||||
Sbjct 914550 TCTTCTAATTGTTTACCCGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCTTTA 914491
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
|||||||| || || | || | ||||| ||||| |||||||| | ||| |
Sbjct 914490 TCTTGAATCTTAGACTTCACATTATCAATAGTGTCAGAAGATTCGACTTCCAAAGTGATA 914431
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || || | ||| || || || ||||||||
Sbjct 914430 GTCTTACCTGTCAAAGTCTTGACGAAGATTTGCAT 914396
Score = 104 bits (114), Expect = 2e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| |||| || || || ||||||||||| || || || ||| | ||| |
Sbjct 914154 CTCAAGACTAAGTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCGGATAGAGTTCTTCCG 914095
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| || |||||||| || || | ||||||| ||| ||||| || ||||| ||||| ||
Sbjct 914094 TCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTG 914035
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
|||||||| || || | || | ||||| ||||| || ||||| | ||| |
Sbjct 914034 TCTTGAATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATG 913975
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|||||||| || | ||| || || || ||||||||
Sbjct 913974 GTTTTGCCTGTCAAAGTCTTGACGAAGATTTGCAT 913940
Score = 100 bits (110), Expect = 3e-16
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| |||| || || || |||||||||||||| || || ||| | ||| |
Sbjct 913926 CTCAAGACTAAGTGAAGTGTAGATTCCTTTTGGATGTTGTAGTCGGATAGAGTTCTTCCG 913867
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| || ||||| || || || | ||||||| ||| ||||| || ||||| ||||| |||
Sbjct 913866 TCTTCTAATTGCTTACCCGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTA 913807
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
||||| || || || | || | ||||| ||||| || ||||| | ||| |
Sbjct 913806 TCTTGGATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATG 913747
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || |||| || || ||||| ||||||||
Sbjct 913746 GTCTTACCTGTTAACGTCTTGACAAAGATTTGCAT 913712
Score = 98.7 bits (108), Expect = 9e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173
||||| | | |||||| || | || || || |||||||||||||| || || |||
Sbjct 914850 CCTCCTCTCAACCTCAAGACCAAGTGGAGTGTGGATTCCTTTTGGATGTTGTAGTCGGAT 914791
Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233
| ||| | || || ||||| || || || | ||||||| ||| ||||| || |||
Sbjct 914790 AGAGTTCTTCCGTCTTCTAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGGA 914731
Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293
|| ||||| || |||||||| || || | || | ||||| ||||| ||||||
Sbjct 914730 ATACCTTCCTTGTCTTGAATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCGACT 914671
Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| | ||| | || || || || | ||| || || || ||||||||
Sbjct 914670 TCCAAAGTGATAGTCTTACCTGTCAAAGTCTTGACGAAGATTTGCAT 914624
>seq32
Length=1561830
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTA 45182
|| ||||| || | || || || |||||||||||||| || || || | ||| ||
Sbjct 1515008 AGTCTCAAGACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTA 1515067
Query 45183 GAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCT 45242
|| |||||||| || || || | ||||||| ||| ||||| || ||||| |||||
Sbjct 1515068 CCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCTTCC 1515127
Query 45243 TTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTA 45302
|| |||||||| || |||| || | |||||| ||||| |||||||| | |||
Sbjct 1515128 TTGTCTTGAATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCGACTTCCAAAGTG 1515187
Query 45303 ACCGTTTTGCCGGTTAGAGTTTTTACAAAA 45332
| || || || || | || || || |||
Sbjct 1515188 ATGGTCTTACCAGTCAAGGTCTTGACGAAA 1515217
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452002996598560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |