Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F000747785.1_202014-06- 30] 36 sequences; 11,165,408 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq19 123 2e-23 seq33 109 5e-19 seq32 95.1 1e-14 >seq19 Length=169523 Score = 123 bits (136), Expect = 2e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | || || || |||||||||||||| || || || | ||| || | Sbjct 25838 CTCAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCA 25779 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||||||| || || || | ||||||| ||| ||||| || ||||| ||||| || Sbjct 25778 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTG 25719 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 ||||| || || |||| || | |||||||||||| |||||||| | |||| Sbjct 25718 TCTTGGATCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAATA 25659 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATCGC 45343 || || || ||||| || || || ||||||||||| || Sbjct 25658 GTCTTACCAGTTAGGGTCTTGACGAAAATTTGCATGGC 25621 >seq33 Length=1695378 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| |||| || || || ||||||||||| || || || ||| | ||| | Sbjct 914382 CTCAAGACTAAGTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCGGATAGAGTTCTTCCG 914323 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || || |||||||| || || | ||||||| ||| ||||| || ||||| ||||||||| Sbjct 914322 TCTTCTAATTGTTTACCCGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCTTTA 914263 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 |||||||| || || | || | ||||| ||||| |||||||| | ||| | Sbjct 914262 TCTTGAATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCGACTTCCAAAGTGATA 914203 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || | ||| || || || |||||||| Sbjct 914202 GTCTTACCTGTCAAAGTCTTGACGAAGATTTGCAT 914168 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| |||| || || || ||||||||||| || || || ||| | ||| | Sbjct 914610 CTCAAGACTAAGTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCGGATAGAGTTCTTCCG 914551 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || || |||||||| || || | ||||||| ||| ||||| || ||||| ||||||||| Sbjct 914550 TCTTCTAATTGTTTACCCGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCTTTA 914491 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 |||||||| || || | || | ||||| ||||| |||||||| | ||| | Sbjct 914490 TCTTGAATCTTAGACTTCACATTATCAATAGTGTCAGAAGATTCGACTTCCAAAGTGATA 914431 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || | ||| || || || |||||||| Sbjct 914430 GTCTTACCTGTCAAAGTCTTGACGAAGATTTGCAT 914396 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| |||| || || || ||||||||||| || || || ||| | ||| | Sbjct 914154 CTCAAGACTAAGTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCGGATAGAGTTCTTCCG 914095 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || || |||||||| || || | ||||||| ||| ||||| || ||||| ||||| || Sbjct 914094 TCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTG 914035 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 |||||||| || || | || | ||||| ||||| || ||||| | ||| | Sbjct 914034 TCTTGAATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATG 913975 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||||| || | ||| || || || |||||||| Sbjct 913974 GTTTTGCCTGTCAAAGTCTTGACGAAGATTTGCAT 913940 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| |||| || || || |||||||||||||| || || ||| | ||| | Sbjct 913926 CTCAAGACTAAGTGAAGTGTAGATTCCTTTTGGATGTTGTAGTCGGATAGAGTTCTTCCG 913867 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || || ||||| || || || | ||||||| ||| ||||| || ||||| ||||| ||| Sbjct 913866 TCTTCTAATTGCTTACCCGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTA 913807 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 ||||| || || || | || | ||||| ||||| || ||||| | ||| | Sbjct 913806 TCTTGGATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATG 913747 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || |||| || || ||||| |||||||| Sbjct 913746 GTCTTACCTGTTAACGTCTTGACAAAGATTTGCAT 913712 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 ||||| | | |||||| || | || || || |||||||||||||| || || ||| Sbjct 914850 CCTCCTCTCAACCTCAAGACCAAGTGGAGTGTGGATTCCTTTTGGATGTTGTAGTCGGAT 914791 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| | || || ||||| || || || | ||||||| ||| ||||| || ||| Sbjct 914790 AGAGTTCTTCCGTCTTCTAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGGA 914731 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293 || ||||| || |||||||| || || | || | ||||| ||||| |||||| Sbjct 914730 ATACCTTCCTTGTCTTGAATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCGACT 914671 Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || | ||| | || || || || | ||| || || || |||||||| Sbjct 914670 TCCAAAGTGATAGTCTTACCTGTCAAAGTCTTGACGAAGATTTGCAT 914624 >seq32 Length=1561830 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTA 45182 || ||||| || | || || || |||||||||||||| || || || | ||| || Sbjct 1515008 AGTCTCAAGACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTA 1515067 Query 45183 GAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCT 45242 || |||||||| || || || | ||||||| ||| ||||| || ||||| ||||| Sbjct 1515068 CCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCTTCC 1515127 Query 45243 TTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTA 45302 || |||||||| || |||| || | |||||| ||||| |||||||| | ||| Sbjct 1515128 TTGTCTTGAATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCGACTTCCAAAGTG 1515187 Query 45303 ACCGTTTTGCCGGTTAGAGTTTTTACAAAA 45332 | || || || || | || || || ||| Sbjct 1515188 ATGGTCTTACCAGTCAAGGTCTTGACGAAA 1515217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452002996598560