Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F000747785.1_202014-06- 30] 36 sequences; 11,165,408 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq2 210 3e-49 seq32 91.5 2e-13 >seq2 Length=945054 Score = 210 bits (232), Expect = 3e-49 Identities = 895/1401 (64%), Gaps = 35/1401 (2%) Strand=Plus/Plus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 || ||||||| ||||||||||| || ||||| |||| |||||||||||||| ||| || Sbjct 340053 TACATGTTGGAAGTGTATGGCTCGAAACACTCGTTGTAACCCAAGATTTGGGATGTAGAA 340112 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022 || || ||||| || || | | | ||| | ||||| | | || || Sbjct 340113 GCGGTTGGCATTGGAGCGAGCAACAAAGAGTTTCTTAGACCGTGTTGCTTGATTTCAGCC 340172 Query 116023 TTGAGGGCGTCCCAGTCG--TAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGA 116080 || | | ||||| || ||| | || || | || | |||| | ||| || || | Sbjct 340173 TTCAAGTTATCCCATTCCCATAGGTTAG-TTGGGGTCTTAC-CCCATAGATCGAATTGTA 340230 Query 116081 GGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCA 116140 |||||| || ||||| || || || | |||||||| || || ||| |||| Sbjct 340231 ACTTACCTTCAGATGCTGGAGAGCCTGGGAAAGATTCATATGGACCTTCTTCCTTTGCCA 340290 Query 116141 ATTC---GGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCA 116197 |||| |||| || || || | || || || || ||||| || | | |||| Sbjct 340291 ATTCCATGGAG---GCTTCACAAGCACCATGGTAGATAGTTTCAAAGATTTGGACGTTCA 340347 Query 116198 TTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGAC 116257 | ||| || || || || ||||| | | ||| || || || | || || | || Sbjct 340348 ATCTCTTTGCTTCTTCAGAGTCAAATGGCAAACGTAGCATCATGAAAGCGTCGGCTAAAC 340407 Query 116258 CTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGG 116317 |||| ||||| | |||| || | ||||||||| || || ||| ||| || || || | Sbjct 340408 CTTGAACACCCAATGCAATAGGTCTATGTCTCATGTTTGATCTTCTAGCAGTTTCAACTG 340467 Query 116318 GATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCAT 116377 ||||| | || | || || | || || | || || | |||||| | ||| || | Sbjct 340468 GATAATAGTTACGGTCAATGATTCTGTTCAAGTTGCGAGTCAAAACCTTAGAGATATCGT 340527 Query 116378 GAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGAC--ATACTT--AGGAAGG--- 116430 | | ||| | | | | | | |||||| ||| | ||| || | ||| | Sbjct 340528 GCAACTTCTTGAAGTTGTAGGTTTGAGTCTTACCATCGTTTGATATTTCAATGAACGCTG 340587 Query 116431 -----GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAA 116485 ||||| || |||| ||||| |||| ||| || || | || ||| || | | Sbjct 340588 GCAAAGCGATAGAAGCCAAGTTACAAACAGCGGTTTCTTCTGGGTTAGAGTATTCAACGA 340647 Query 116486 TTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGT 116545 |||| |||||| || ||| ||| || || ||||||||||||||||| ||| ||| Sbjct 340648 TTTCACAACACAAGTTCGAAGACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGT 340707 Query 116546 TACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAG 116605 |||| ||||||||||| ||||| |||| || || || || ||||| | | | |||| Sbjct 340708 TACAAGCATCCTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAG 340767 Query 116606 CCTTCCA-TACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTT 116664 | | ||| || | | | || | ||||| | | || || || |||||| | Sbjct 340768 CGTACCACAACTTTTGAGCCTTG-ACAGTCTTTCTACCACGGCCTTCTCTCTCGTAACGT 340826 Query 116665 GTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGA 116724 ||| | || ||||| || ||||| | | |||| | |||||||| | | |||| Sbjct 340827 TCGTACAATGCTTCAAATTCATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGA 340886 Query 116725 CAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAG 116784 |||| | || ||| | | || ||| || | ||||||||| || ||||||||||| Sbjct 340887 GAGAACAAAGTCCAATCTTCGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCAT 340946 Query 116785 AGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCC 116844 || || | ||| | || | || |||||| | || || || | | || Sbjct 340947 AGTGCTGGGAACAAGTCTCTTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCG 341006 Query 116845 AAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-AC-----CCC 116898 | ||||| | |||||| | |||||| || || | ||||| |||| | || | | Sbjct 341007 ACGAAGTCGAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTC 341066 Query 116899 TTGCGACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGA 116958 ||| |||| | |||| || || | || || ||| || || |||| ||||||| Sbjct 341067 TTG---TTACCACCTTGGTCAACGTAACGGGCAGTGTTGTTGAAAACACGAATCATTGGA 341123 Query 116959 ATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTGACATCG 117018 || ||||| | ||| || || || || ||| ||| | | | | | | | Sbjct 341124 ATAATACCGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTG 341183 Query 117019 TGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTG 117078 || ||||||| ||||||||| || || ||| ||||| || || ||| | | | || Sbjct 341184 TGAATGTGCAAACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTG 341243 Query 117079 CCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGT 117138 |||| || || || || || || |||| | || | ||||| || ||||||||| Sbjct 341244 TCGTAAATACCTTCAATGGAATCTTCCTTCATGGCCACTAGGAAACATGATGACATTTGT 341303 Query 117139 GGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTT-GGGA 117197 || || |||||||| ||||| || || || | ||||| |||| || ||| | || Sbjct 341304 GGATGAGGAGTACCAGCATTGAAAAGTGTAGGCGAAGCGTGTGTGAA-GTATCTTAGAGA 341362 Query 117198 CATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGAC 117257 ||| | ||| || ||||| || ||| ||| ||||| ||||||| | || Sbjct 341363 CATTAGGTTGTAAGTTTCCAAAACCTTTTCAATATCTCTACCGTGGATACCGACAGCCAC 341422 Query 117258 CCGCATAAACATGTATTGGGG 117278 | ||| | ||||| ||| || Sbjct 341423 TCTCATGATCATGTGTTGAGG 341443 >seq32 Length=1561830 Score = 91.5 bits (100), Expect = 2e-13 Identities = 346/530 (65%), Gaps = 25/530 (5%) Strand=Plus/Minus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| || ||| | ||| || || | | | || | ||| || |||||| || |||| Sbjct 411635 GCAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACCT 411576 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 ||||| | |||| ||||||||||||||| || ||| ||| || |||||||| || | Sbjct 411575 GGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCAAAGGAACCAGAGAAAAACACA 411516 Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATC--- 127695 || ||||| |||||||||| | | || || | | ||| ||| || ||| Sbjct 411515 CCTTCCACGGCAGCGAACGCAACCAATCTTTCAGC---GTATAGGG-CTTCGTCATCACG 411460 Query 127696 AAACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGC-TT 127754 || ||| | || ||||| || ||||||| | ||| ||| | ||| | || || || Sbjct 411459 AATCCATCTAATGGCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATT 411400 Query 127755 CA--AAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATA 127812 || |||| || | || || | ||||| |||||||| | || || | ||||| Sbjct 411399 CAACAAGAAGTCGT--GTTCCTTA-GGATCCTTGATGTAAGTGTCAATCAACAACGAATA 411343 Query 127813 TGTTTCGCCGTGGACCATTT-CATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGC 127871 |||||| ||| | ||| ||| || || || |||||||| | ||||| Sbjct 411342 AGTTTCGGAGTGAATGTTTTCCATCATAATTTGGAAAC-CGTAGAAACACTTGGCTTCTG 411284 Query 127872 TTATCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACC 127931 || || |||||| | | || || | | || || || || |||||||| Sbjct 411283 GAATTTGCACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAG 411224 Query 127932 CAGCAAAAAACGCCAGGA---TATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGG 127985 ||||||| ||||| || | | | | | ||| || || |||||||||| | Sbjct 411223 CAGCAAAGAACGCAAGCACTCTGGAGATGAAAAATCTC---TCGTTCTCGTTCATTCTGT 411167 Query 127986 TCTTCCAGTCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCAA 128035 | |||||||| | |||||||| || | ||| | || || ||||||||| Sbjct 411166 TGTTCCAGTCATGAAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAA 411117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506923921760