Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F000747785.1_202014-06-
30] 36 sequences; 11,165,408 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq2 210 3e-49
seq32 91.5 2e-13
>seq2
Length=945054
Score = 210 bits (232), Expect = 3e-49
Identities = 895/1401 (64%), Gaps = 35/1401 (2%)
Strand=Plus/Plus
Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962
|| ||||||| ||||||||||| || ||||| |||| |||||||||||||| ||| ||
Sbjct 340053 TACATGTTGGAAGTGTATGGCTCGAAACACTCGTTGTAACCCAAGATTTGGGATGTAGAA 340112
Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022
|| || ||||| || || | | | ||| | ||||| | | || ||
Sbjct 340113 GCGGTTGGCATTGGAGCGAGCAACAAAGAGTTTCTTAGACCGTGTTGCTTGATTTCAGCC 340172
Query 116023 TTGAGGGCGTCCCAGTCG--TAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGA 116080
|| | | ||||| || ||| | || || | || | |||| | ||| || || |
Sbjct 340173 TTCAAGTTATCCCATTCCCATAGGTTAG-TTGGGGTCTTAC-CCCATAGATCGAATTGTA 340230
Query 116081 GGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCA 116140
|||||| || ||||| || || || | |||||||| || || ||| ||||
Sbjct 340231 ACTTACCTTCAGATGCTGGAGAGCCTGGGAAAGATTCATATGGACCTTCTTCCTTTGCCA 340290
Query 116141 ATTC---GGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCA 116197
|||| |||| || || || | || || || || ||||| || | | ||||
Sbjct 340291 ATTCCATGGAG---GCTTCACAAGCACCATGGTAGATAGTTTCAAAGATTTGGACGTTCA 340347
Query 116198 TTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGAC 116257
| ||| || || || || ||||| | | ||| || || || | || || | ||
Sbjct 340348 ATCTCTTTGCTTCTTCAGAGTCAAATGGCAAACGTAGCATCATGAAAGCGTCGGCTAAAC 340407
Query 116258 CTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGG 116317
|||| ||||| | |||| || | ||||||||| || || ||| ||| || || || |
Sbjct 340408 CTTGAACACCCAATGCAATAGGTCTATGTCTCATGTTTGATCTTCTAGCAGTTTCAACTG 340467
Query 116318 GATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCAT 116377
||||| | || | || || | || || | || || | |||||| | ||| || |
Sbjct 340468 GATAATAGTTACGGTCAATGATTCTGTTCAAGTTGCGAGTCAAAACCTTAGAGATATCGT 340527
Query 116378 GAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGAC--ATACTT--AGGAAGG--- 116430
| | ||| | | | | | | |||||| ||| | ||| || | ||| |
Sbjct 340528 GCAACTTCTTGAAGTTGTAGGTTTGAGTCTTACCATCGTTTGATATTTCAATGAACGCTG 340587
Query 116431 -----GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAA 116485
||||| || |||| ||||| |||| ||| || || | || ||| || | |
Sbjct 340588 GCAAAGCGATAGAAGCCAAGTTACAAACAGCGGTTTCTTCTGGGTTAGAGTATTCAACGA 340647
Query 116486 TTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGT 116545
|||| |||||| || ||| ||| || || ||||||||||||||||| ||| |||
Sbjct 340648 TTTCACAACACAAGTTCGAAGACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGT 340707
Query 116546 TACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAG 116605
|||| ||||||||||| ||||| |||| || || || || ||||| | | | ||||
Sbjct 340708 TACAAGCATCCTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAG 340767
Query 116606 CCTTCCA-TACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTT 116664
| | ||| || | | | || | ||||| | | || || || |||||| |
Sbjct 340768 CGTACCACAACTTTTGAGCCTTG-ACAGTCTTTCTACCACGGCCTTCTCTCTCGTAACGT 340826
Query 116665 GTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGA 116724
||| | || ||||| || ||||| | | |||| | |||||||| | | ||||
Sbjct 340827 TCGTACAATGCTTCAAATTCATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGA 340886
Query 116725 CAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAG 116784
|||| | || ||| | | || ||| || | ||||||||| || |||||||||||
Sbjct 340887 GAGAACAAAGTCCAATCTTCGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCAT 340946
Query 116785 AGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCC 116844
|| || | ||| | || | || |||||| | || || || | | ||
Sbjct 340947 AGTGCTGGGAACAAGTCTCTTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCG 341006
Query 116845 AAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-AC-----CCC 116898
| ||||| | |||||| | |||||| || || | ||||| |||| | || | |
Sbjct 341007 ACGAAGTCGAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTC 341066
Query 116899 TTGCGACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGA 116958
||| |||| | |||| || || | || || ||| || || |||| |||||||
Sbjct 341067 TTG---TTACCACCTTGGTCAACGTAACGGGCAGTGTTGTTGAAAACACGAATCATTGGA 341123
Query 116959 ATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTGACATCG 117018
|| ||||| | ||| || || || || ||| ||| | | | | | | |
Sbjct 341124 ATAATACCGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTG 341183
Query 117019 TGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTG 117078
|| ||||||| ||||||||| || || ||| ||||| || || ||| | | | ||
Sbjct 341184 TGAATGTGCAAACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTG 341243
Query 117079 CCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGT 117138
|||| || || || || || || |||| | || | ||||| || |||||||||
Sbjct 341244 TCGTAAATACCTTCAATGGAATCTTCCTTCATGGCCACTAGGAAACATGATGACATTTGT 341303
Query 117139 GGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTT-GGGA 117197
|| || |||||||| ||||| || || || | ||||| |||| || ||| | ||
Sbjct 341304 GGATGAGGAGTACCAGCATTGAAAAGTGTAGGCGAAGCGTGTGTGAA-GTATCTTAGAGA 341362
Query 117198 CATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGAC 117257
||| | ||| || ||||| || ||| ||| ||||| ||||||| | ||
Sbjct 341363 CATTAGGTTGTAAGTTTCCAAAACCTTTTCAATATCTCTACCGTGGATACCGACAGCCAC 341422
Query 117258 CCGCATAAACATGTATTGGGG 117278
| ||| | ||||| ||| ||
Sbjct 341423 TCTCATGATCATGTGTTGAGG 341443
>seq32
Length=1561830
Score = 91.5 bits (100), Expect = 2e-13
Identities = 346/530 (65%), Gaps = 25/530 (5%)
Strand=Plus/Minus
Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579
||||| || ||| | ||| || || | | | || | ||| || |||||| || ||||
Sbjct 411635 GCAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACCT 411576
Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639
||||| | |||| ||||||||||||||| || ||| ||| || |||||||| || |
Sbjct 411575 GGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCAAAGGAACCAGAGAAAAACACA 411516
Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATC--- 127695
|| ||||| |||||||||| | | || || | | ||| ||| || |||
Sbjct 411515 CCTTCCACGGCAGCGAACGCAACCAATCTTTCAGC---GTATAGGG-CTTCGTCATCACG 411460
Query 127696 AAACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGC-TT 127754
|| ||| | || ||||| || ||||||| | ||| ||| | ||| | || || ||
Sbjct 411459 AATCCATCTAATGGCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATT 411400
Query 127755 CA--AAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATA 127812
|| |||| || | || || | ||||| |||||||| | || || | |||||
Sbjct 411399 CAACAAGAAGTCGT--GTTCCTTA-GGATCCTTGATGTAAGTGTCAATCAACAACGAATA 411343
Query 127813 TGTTTCGCCGTGGACCATTT-CATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGC 127871
|||||| ||| | ||| ||| || || || |||||||| | |||||
Sbjct 411342 AGTTTCGGAGTGAATGTTTTCCATCATAATTTGGAAAC-CGTAGAAACACTTGGCTTCTG 411284
Query 127872 TTATCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACC 127931
|| || |||||| | | || || | | || || || || ||||||||
Sbjct 411283 GAATTTGCACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAG 411224
Query 127932 CAGCAAAAAACGCCAGGA---TATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGG 127985
||||||| ||||| || | | | | | ||| || || |||||||||| |
Sbjct 411223 CAGCAAAGAACGCAAGCACTCTGGAGATGAAAAATCTC---TCGTTCTCGTTCATTCTGT 411167
Query 127986 TCTTCCAGTCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCAA 128035
| |||||||| | |||||||| || | ||| | || || |||||||||
Sbjct 411166 TGTTCCAGTCATGAAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAA 411117
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613506923921760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |