Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F000747785.1_202014-06- 30] 36 sequences; 11,165,408 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq2 241 2e-58 seq8 102 1e-16 seq32 86.0 7e-12 >seq2 Length=945054 Score = 241 bits (266), Expect = 2e-58 Identities = 1118/1758 (64%), Gaps = 50/1758 (3%) Strand=Plus/Plus Query 109411 AGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATTGAAGAGAGT 109470 || || |||||||| || || | ||| ||||||| |||| | |||||| |||| | Sbjct 339711 AGGTAGTACATACCAGTCTTCAAACCCTTCTTCCATCCGTAGAAATGCATGGAAGTCAAC 339770 Query 109471 TTGG--AAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAATC 109528 || | ||| | || | | || | ||||| ||| || || |||||||| | Sbjct 339771 TTACCCATAGT-TGGGGCACGA-ATGTGAATGTTCAACGATTGGGATTGATCGATATAAG 339828 Query 109529 GACCACGATCAGCCGCCATGTCGATGATACACTTTTGGCTAATTTCCCAGACAGTCTTGT 109588 | |||| ||||| ||||| ||||| || |||||| |||||||| |||||||||| Sbjct 339829 CAGCACGGTCAGCGGCCATATCGATAATGTGCTTTTGCGATATTTCCCAAACAGTCTTGT 339888 Query 109589 ACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCAC---CAGCCT 109645 | |||| || | || | || |||| | |||||| ||||| ||| |||| Sbjct 339889 ATAAATCTTTTAGCTCTTGTGGGATGTTTGGCAAGTTTTGGATAGAACCATTATCAGCGA 339948 Query 109646 TCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAGATC--GTCAAC 109703 | | ||| || |||||| ||| ||| | ||| | | | ||| || | | Sbjct 339949 TGAT-ATGGGA--CTTCATAGCTTCATCCCAAATACCCAAATCAACCAAATCACGT-AGC 340004 Query 109704 AAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGT 109763 ||| | |||||| | |||||||||| | || || ||| ||||| | Sbjct 340005 AAG-TAAGGGTTGACGATTTGGAATTCACCAGATAACACACGACGAGAGTACATGTTGGA 340063 Query 109764 CGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCAT 109823 ||||| || ||||||||||| |||| || | |||||| | || ||||| || ||||| Sbjct 340064 AGTGTATGGCTCGAAACACTCGTTGTAACCCAAGATTTGGGATGTAGAAGCGGTTGGCAT 340123 Query 109824 GGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTAC--CCGC--TCACGCATTG 109879 ||||| | | | | ||||| ||||| | ||| | | || ||| | || Sbjct 340124 TGGAGCGAGCAACAAAGAGTTTCTTAGACCGTGTTGCTTGATTTCAGCCTTCAAG--TTA 340181 Query 109880 CGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCACATATCTGGTTGAAGTA 109939 ||||| || | | | | | |||| ||| ||| | ||| ||| | Sbjct 340182 --TCCCATTCCCATAGGTTAGT---TGGGGTCTTACC---CCATAGATCGAATTGTAACT 340233 Query 109940 CACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCAACT 109999 ||| |||| || ||||| || |||| || || | || || ||| ||||| | Sbjct 340234 TACCTTCAGATGCTGGAGAGCCTGGGAAAGATTCATATGGACCTTCTTCCTTTGCCAATT 340293 Query 110000 CGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCATGAGGC 110059 | || || || || |||| || ||||| ||||| || || | |||| Sbjct 340294 CCATGGAGGCTTCACAAGCACCATGGTAGATAGTTTCAAAGATTTGGACGTTCAATCTCT 340353 Query 110060 GAGACTCTTCACAGTCGAAGGGAAGACCACAAAGAATAAACACATCCGCTAGACCCTGAA 110119 | |||||| |||| || || | || | || || | || |||| ||| |||| Sbjct 340354 TTGCTTCTTCAGAGTCAAATGGCAAACGTAGCATCATGAAAGCGTCGGCTAAACCTTGAA 340413 Query 110120 CACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAA 110179 |||| | |||| || | ||| ||||||| || | || ||||||||| || || ||| Sbjct 340414 CACCCAATGCAATAGGTCTATGTCTCATGTTTGATCTTCTAGCAGTTTCAACTGGATAAT 340473 Query 110180 AGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTT 110239 |||| ||||| |||| | || | || |||| | ||| | ||| || || | | Sbjct 340474 AGTTACGGTCAATGATTCTGTTCAAGTTGCGAGTCAAAACCTTAGAGATATCGTGCAACT 340533 Query 110240 TGTCGTAATCGAACGTTTTCGTCT--CCTTATTGACATATTTG----------GGGAGAG 110287 | | | | | | | |||| |||| || | | |||||| || | || Sbjct 340534 TCTTGAAGTTGTAGGTTTGAGTCTTACCATCGTTTGATATTTCAATGAACGCTGGCAAAG 340593 Query 110288 CAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCG 110347 | ||||| || | || || |||| || || ||| || | |||||| | ||||| Sbjct 340594 CGATAGAAGCCAAGTTACAAACAGCGGTTTCTTCTGGGTTAGAGTATTCAACGATTTCAC 340653 Query 110348 TACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATG 110407 ||||||||| ||| ||| || |||||||||||| ||||| || ||| || | Sbjct 340654 AACACAAGTTCGAAGACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAG 340713 Query 110408 CATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCC 110467 ||||||| || |||||| |||||||||||||||| || || | | | || || | || Sbjct 340714 CATCCTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACC 340773 Query 110468 ATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACA 110527 | | | || |||||| || | | ||||| |||||| ||||| Sbjct 340774 ACAACTTTTGAGCCTTGACAGTCTTTCTACCACGGCCTTCTCTCTCGTAACGTTCGTACA 340833 Query 110528 AGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGA 110587 | | |||||||| | ||||| ||||| | | || || | || ||| |||| | Sbjct 340834 ATGCTTCAAATTCATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGAGAGAACA 340893 Query 110588 GGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCG 110647 | ||||| | | || ||| || ||||||||||| || || || ||||| | || | Sbjct 340894 AAGTCCAATCTTCGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTG 340953 Query 110648 AGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGT 110707 ||| | ||| | ||| ||||| | ||| ||||| | | || | |||| Sbjct 340954 GGAACAAGTCTCTTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGT 341013 Query 110708 CCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCC------CTTACGAC 110761 | | |||||| ||||||||||| |||| || | |||| || || ||| || Sbjct 341014 CGAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTAC 341073 Query 110762 GACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTC 110821 ||| |||| ||| || || || ||| ||||| || | | ||| |||||||| | Sbjct 341074 CACCT---TGGTCAACGTAACGGGCAGTGTTGTTGAAAACACGAATCATTGGAATAATAC 341130 Query 110822 CATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATAT 110881 | | || ||| || ||||| ||| || | | |||||||| ||| || | Sbjct 341131 CGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGT 341190 Query 110882 GCATACCAATACCACCCGCCCACTTACTAATTTGTGCACACTCTGTGAGTGTACCATAAA 110941 ||| |||||||||||| || |||| || ||||| || | | || | |||| Sbjct 341191 GCAAACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAA 341250 Query 110942 TACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAG 111001 |||| ||||| |||||| |||| |||| | ||| || || || ||||| || ||| ||| Sbjct 341251 TACCTTCAATGGAATCTTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAG 341310 Query 111002 GCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTGGGACATCTTGT 111061 | || || |||||||| |||||||| | || || |||| | | | ||||| || Sbjct 341311 GAGTACCAGCATTGAAAAGTGTAGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGT 341370 Query 111062 TGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCATGA 111121 |||| || || | | | |||| ||||||| ||||| | || |||| ||||| Sbjct 341371 TGTAAGTTTCCAAAACCTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCTCATGA 341430 Query 111122 ACATATATTGAGG-CGTT 111138 ||| | |||||| |||| Sbjct 341431 TCATGTGTTGAGGACGTT 341448 >seq8 Length=929314 Score = 102 bits (112), Expect = 1e-16 Identities = 313/479 (65%), Gaps = 4/479 (1%) Strand=Plus/Plus Query 167302 CGCTTGATATTCTCCTTGATATCGTCAGGGTTAAATGGGGGGATGTAGCAACTGAAACCC 167361 ||||||| ||| | ||||| |||| || ||||| || |||| | ||| |||| Sbjct 456508 CGCTTGACATTGTTGACAATATCTACAGGATTGAATGGCGGAATGTTGGTACTCCAACCA 456567 Query 167362 GTACCAATACCTTCAGTACCGTTTACCAAAACCATCGGTAGAGTTGGCATGTAAAAGTCG 167421 || |||||||||||| ||| || ||||||| ||| || | |||| ||| | || Sbjct 456568 GTCCCAATACCTTCACAACCATTGACCAAAATCATAGGAATTACAGGCAAGTACCATTCA 456627 Query 167422 GGTTCAATGGAACGACCATCATCATCCAAGTA-GTTGAGAATGGCATCATCTTTGGGATC 167480 ||||||| | | |||| || | | ||| ||| | ||||| ||| ||| | | Sbjct 456628 GGTTCAACTGTTTGTTCATCGTCTTGAATGTAGGTTAATAATGG-ATCGTCTAGAGAGTT 456686 Query 167481 GAAGAGCTTTCGAGCCTCCTTGGTAAGCTTCGTAAAGATGTACCTCGTCTGAGACGCATC 167540 |||| |||| || ||| |||||| || ||||| || |||| || | ||| Sbjct 456687 AAAGATTTTTCTAGTGATCTTATTAAGCTCTGTGAAGATATATCTCGGAGCAGCTGAATC 456746 Query 167541 CTTGCCACCCATGAGGCGTGTACCAAATTGACCACATGGC-TCGAGAAGATTGATGTTAT 167599 || ||||| | | ||||| || |||| ||| || | ||| | || || | Sbjct 456747 TTTACCACCAGTAGCTCTGGTACCGAAAGCACCATTAGGCTTCAACAAG-TAAATATTGT 456805 Query 167600 TCGACCCCGTATAATCGTTGGCCAACTTGACGATCGTTTCAGCGAGGGAAACTTCGCCGT 167659 | || || | |||| | ||| || || ||||||| | |||||| |||| |||| Sbjct 456806 TAGAACCAACAAAATCTTGGGCTAAACCAACAATCGTTTGATATAGGGAAGCTTCACCGT 456865 Query 167660 GGTGGTAAGCACTCTTTTCAGCCACATATGCTGCCAACTGTGCAACCTTCATCTCATCTT 167719 | ||||| | | | ||||| ||||| | | | || |||||||| || || || Sbjct 456866 GATGGTATCCGGTATGTTCAGAAACATAACCACCTAGTTGAGCAACCTTGATTTCTGATT 456925 Query 167720 TGAGATTCTTTTGGAAACATGAATACATAACCTTGCGTTGAGAAGGTTTGAGACCATCT 167778 | | ||| | | ||||| | ||| |||||||| | |||| |||||| | |||||| Sbjct 456926 TTAAATTTCTCTTAAAACAGGCATAGATAACCTTTCTTTGACCAGGTTTTAACCCATCT 456984 >seq32 Length=1561830 Score = 86.0 bits (94), Expect = 7e-12 Identities = 163/235 (69%), Gaps = 4/235 (2%) Strand=Plus/Minus Query 119208 TAGTCACCCACCCTCTTTTCGAAGAAATTCGTCTTACCATCGAGTGAGATGTTTTCCATA 119267 ||||| ||| ||||||||||||||||| || ||||| | | || |||||||||||| Sbjct 411923 TAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTTTCCATA 411864 Query 119268 AAGTCAAAAGGATTTTTGGAGTTCCAG-ATTGGTGGTTGACCAACTTGTTTCAGAAGACG 119326 ||||| || || || || ||| || ||| | ||| ||| | ||| || | Sbjct 411863 AAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTT-ACCTAAAGCAACCAGTAGTCT 411805 Query 119327 ATCGGAGACATACTCGATATATTCGGACATCTTTTCCGAATTCATACCTATGAGATTACA 119386 || | ||| | |||| |||| | |||| || | |||||||| | ||| | | Sbjct 411804 GTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGA-GAAA 411746 Query 119387 CGGG-AGAGCATCGAGGATGAAGTTCTTCTCGATCTCCACAGCTTCTTTCACGAT 119440 |||| ||||| |||| || | | |||| |||||||| ||||||||| | | ||| Sbjct 411745 CGGGTAGAGCGTCGATGAAGTATCTCTTTTCGATCTCAACAGCTTCTGTGATGAT 411691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975734960800