Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F000747785.1_202014-06-
30] 36 sequences; 11,165,408 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq27 165 4e-36
seq2 150 9e-32
>seq27
Length=1195410
Score = 165 bits (182), Expect = 4e-36
Identities = 186/248 (75%), Gaps = 2/248 (1%)
Strand=Plus/Minus
Query 25901 AAATG--CCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTG 25958
||||| |||||| |||| | ||||| | |||||| | ||| |||||||| | |
Sbjct 100484 AAATGGACCAATCTTCATTATTTTCAACACGTTGCATAAAAAGATCCGGAATCCATAGAG 100425
Query 25959 CATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGA 26018
|||||||||| |||| || ||||||||||||||||||||||||||| |||| | |||||
Sbjct 100424 CATAAAATAAGTCTCGGGCCCTCATTTCTTCTTTTCCGTGATTCTTTCTTAGTTGTAAGA 100365
Query 26019 AATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTC 26078
| |||| |||||| ||||||||||| || || ||| ||| ||| | |||
Sbjct 100364 AGTCAATAATATCCCCATGCCATGGTTCCAAGTATATACAAAAGGCACCAGGGCGTTTGT 100305
Query 26079 CTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATC 26138
||||||||||| || |||||||| || | || ||||| || ||| |||||||| |
Sbjct 100304 TCCCACCTTGATCGACATATCTTGCTGTGTTGTTAAAAACCCGCAGCATAGGAACTAAAC 100245
Query 26139 CAGTTGAA 26146
|| |||||
Sbjct 100244 CATTTGAA 100237
Score = 125 bits (138), Expect = 4e-24
Identities = 365/545 (67%), Gaps = 23/545 (4%)
Strand=Plus/Minus
Query 24648 TATTTTCTTTTTCTAATGTAAATTGCTTAGCT-GATACTGCTGGTTTAGTTCTAAGATAA 24706
||||||| | | || |||||||| |||| || | |||| | |||||||||||||
Sbjct 101729 TATTTTCATCATTCAAAGTAAATTGTATAGCACGAGAA-GCTGCCTGAGTTCTAAGATAA 101671
Query 24707 TACATTCCAGTTTTCAATTTCTTCTTCCAACCGTAAAAATGCATTGATGTTAGTTTTGCA 24766
||||| || || |||||| ||||||||| | ||||| ||||||||||||| |||| |
Sbjct 101670 TACATCCCTGTCTTCAATCCCTTCTTCCATGCATAAAAGTGCATTGATGTTAATTTTCCC 101611
Query 24767 AT-GTTTGCTGATTCTAAAAACAAGTTCATCGATTGAGCTTGGCAAACAAAACGTTGTCT 24825
|| ||| | | | | ||| ||||||| | || |||| || || || | |||
Sbjct 101610 ATAGTTGGTTCACGC-AAATACAAGTTTAGAGACTGAGACTGATCAATGAATGGAGCTCT 101552
Query 24826 ATCTGCAGCTAAG-TCAATGATCGTTTTCATCGATATATCGTAAGCTGTTTTGTAT-CTC 24883
|||| | | ||| || || | |||| || || || || | ||||||||| |
Sbjct 101551 ATCT-CTGGAAAGATCGATCAATTTTTTTTGAGAAATTTCCCAAACAGTTTTGTATAAAC 101493
Query 24884 TCTTTTATCTCAGTTGGAATACTTGCAATATTTTGAACTGATCCATTTTCTCTCAATAG- 24942
|| || ||||| || | || |||| |||||| || ||||| ||| | |||
Sbjct 101492 TC-TTCATCTCCTCCGGCACACCATCAATGGTTTGAATGGAACCATTATCTTT---TAGA 101437
Query 24943 ATTCAATCTCATA---TTCGGTGTCCAAAGATTAATTTTTTCAAGATCTCTAATCAAGTG 24999
|||| || | || || || |||| | || ||||| || ||| | || |
Sbjct 101436 ATTCTATTTTTTAGCTTTTCGT-TCCATACTTTCATTTTACAAAAATCATCCACCATATA 101378
Query 25000 TTTATTTATGATAATAAATTCTCCAGACAAAACTCTTCT--TATTGATAAGTTTGAAGTG 25057
|| ||| | ||| ||||||||||||| | || || || || |||| || || ||
Sbjct 101377 TTGATTAACGATTGTAAATTCTCCAGATAGCACCCTCCTGGAATAGATA--TTAGAGGTC 101320
Query 25058 AATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAAT 25117
| ||||| || |||| | || || ||||||||||| || || |||||||||
Sbjct 101319 ATAGGTTCGAACGATTCTGTGAAACCCAATATTTGAGAAGTTGAGGCAGTTGGCATTGGA 101260
Query 25118 GCTATTAATAGCGAATTTCTCAAACCA---TATTTAACAATCTCTTGTTTTAATTTATCC 25174
| | ||| || ||||| ||||||||| ||| ||| | ||| ||||| |||||
Sbjct 101259 CCAACTAAAAGTGAATTCCTCAAACCAGGCCCATTAGTAATTTGTTGCTTTAAGGTATCC 101200
Query 25175 CAATC 25179
|||||
Sbjct 101199 CAATC 101195
>seq2
Length=945054
Score = 150 bits (166), Expect = 9e-32
Identities = 323/478 (68%), Gaps = 6/478 (1%)
Strand=Plus/Plus
Query 25889 TTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGA 25948
|||||| |||| ||| |||||| | || | ||| ||| ||| ||| || | ||||||
Sbjct 340881 TTTGGAGAGAACAAAGTCCAATCTTCGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGG 340940
Query 25949 ATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTT 26008
||||| | ||| || || ||||| || | |||||||| || ||||| |||||| |
Sbjct 340941 ATCCATAGTGCTGGGAACAAGTCTCTTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTG 341000
Query 26009 AGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCT 26068
| || | ||| || || ||||||||||||||||| || | || | || || |||
Sbjct 341001 ATGTCGACGAAGTCGAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCA 341060
Query 26069 TTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATT 26128
||| || |||||||| || ||||| | ||||| | |||||||| | ||||
Sbjct 341061 GGTCTCTTGTTACCACCTTGGTCAACGTAACGGGCAGTGTTGTTGAAAACACGAATCATT 341120
Query 26129 GGAACTAATCCAGTT-GAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAAT 26187
|||| |||| | ||| ||| ||||| || | | ||| | || || || || | |||
Sbjct 341121 GGAA-TAATACCGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAACCGGTAGAACGAAT 341179
Query 26188 ATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATC--TGAA 26245
| |||| || | ||| || |||||||| || || || ||||| || | ||
Sbjct 341180 GTTGTGAATGTGCAAACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCAA 341239
Query 26246 ACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGAT 26305
| || ||| |||| |||| ||| ||| | ||||| | | || ||||| || ||
Sbjct 341240 A--GTGTCGTAAATACCTTCAATGGAATCTTCCTTCATGGCCACTAGGAAACATGATGAC 341297
Query 26306 AATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATATC 26363
| ||| | ||||| || || | ||| || | ||| || | ||| || || | ||||
Sbjct 341298 ATTTGTGGATGAGGAGTACCAGCATTGAAAAGTGTAGGCGAAGCGTGTGTGAAGTATC 341355
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253039888978700
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |