Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F000747785.1_202014-06- 30] 36 sequences; 11,165,408 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq33 165 1e-35 seq19 132 9e-26 seq32 93.3 8e-14 >seq33 Length=1695378 Score = 165 bits (182), Expect = 1e-35 Identities = 180/239 (75%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| |||||||||||||||| | || | || | ||||| || || || || Sbjct 913947 ATTTGCATACCACCTCTCAATCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGGATGTTG 913888 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 |||||||||| ||||| || |||||||| || || |||||||| ||||| ||||| Sbjct 913887 TAGTCGGATAGAGTTCTTCCGTCTTCTAATTGCTTACCCGCAAAAATCAATCTTTGTTGG 913828 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || ||||| || ||||| |||||||| || || | || | ||| |||||| || ||| Sbjct 913827 TCTGGAGGAATACCTTCCTTATCTTGGATCTTAGACTTCACATTGTCAATAGTGTCAGAA 913768 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 || |||||||| | ||| || || |||||||||| ||| || ||||| ||||||||||| Sbjct 913767 GATTCAACTTCCAAAGTGATGGTCTTACCTGTTAACGTCTTGACAAAGATTTGCATTTT 913709 Score = 159 bits (176), Expect = 6e-34 Identities = 177/236 (75%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| |||||||||||||||| | || | || | ||||| || || ||| || Sbjct 914403 ATTTGCATACCACCTCTCAATCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGAATGTTG 914344 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 |||||||||| ||||| || ||||||||||| || |||||||| ||||| ||||| Sbjct 914343 TAGTCGGATAGAGTTCTTCCGTCTTCTAATTGTTTACCCGCAAAAATCAATCTTTGTTGG 914284 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || ||||| || |||||||||||||| || || | || | ||| |||||| || ||| Sbjct 914283 TCTGGAGGAATACCTTCTTTATCTTGAATCTTAGACTTCACATTGTCAATAGTGTCAGAA 914224 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || ||||| | ||| ||||| |||||||| | || || || || |||||||| Sbjct 914223 GATTCGACTTCCAAAGTGATAGTCTTACCTGTCAAAGTCTTGACGAAGATTTGCAT 914168 Score = 159 bits (176), Expect = 6e-34 Identities = 177/236 (75%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| |||||||||||||||| | || | || | ||||| || || ||| || Sbjct 914631 ATTTGCATACCACCTCTCAATCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGAATGTTG 914572 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 |||||||||| ||||| || ||||||||||| || |||||||| ||||| ||||| Sbjct 914571 TAGTCGGATAGAGTTCTTCCGTCTTCTAATTGTTTACCCGCAAAAATCAATCTTTGTTGG 914512 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || ||||| || |||||||||||||| || || | || | ||| |||||| || ||| Sbjct 914511 TCTGGAGGAATACCTTCTTTATCTTGAATCTTAGACTTCACATTATCAATAGTGTCAGAA 914452 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || ||||| | ||| ||||| |||||||| | || || || || |||||||| Sbjct 914451 GATTCGACTTCCAAAGTGATAGTCTTACCTGTCAAAGTCTTGACGAAGATTTGCAT 914396 Score = 150 bits (166), Expect = 3e-31 Identities = 175/236 (74%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| |||||||||||||||| | || | || | ||||| || || ||| || Sbjct 914175 ATTTGCATACCACCTCTCAATCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGAATGTTG 914116 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 |||||||||| ||||| || ||||||||||| || |||||||| ||||| ||||| Sbjct 914115 TAGTCGGATAGAGTTCTTCCGTCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGG 914056 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || ||||| || ||||| || ||||| || || | || | ||| |||||| || ||| Sbjct 914055 TCTGGAGGAATACCTTCCTTGTCTTGAATCTTAGACTTCACATTGTCAATAGTGTCAGAA 913996 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || |||||||| | ||| || ||||| ||||| | || || || || |||||||| Sbjct 913995 GATTCAACTTCCAAAGTGATGGTTTTGCCTGTCAAAGTCTTGACGAAGATTTGCAT 913940 >seq19 Length=169523 Score = 132 bits (146), Expect = 9e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192 |||||||||||||| | |||| || | |||| || || || || ||||| || Sbjct 25851 ACCACCTCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCAGA 25792 Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252 || |||||| ||| || ||||| || || ||||| || ||||| ||||| || ||||| Sbjct 25791 CAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGG 25732 Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312 || ||||| || ||||| || || | || | ||| ||| || |||||||| || || Sbjct 25731 AATACCTTCCTTGTCTTGGATCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGAC 25672 Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||| | || ||||| ||||| ||||| || || || || |||||||| Sbjct 25671 TTCCAAGGTAATAGTCTTACCAGTTAGGGTCTTGACGAAAATTTGCAT 25624 >seq32 Length=1561830 Score = 93.3 bits (102), Expect = 8e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||| | || | |||| || | || | || || || || ||||| Sbjct 1514996 ATACCACCTCTTAGTCTCAAGACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCA 1515055 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || || |||||| || || ||||| || || ||||| || ||||| ||||| || || Sbjct 1515056 GACAAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGT 1515115 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| || ||||| || |||| || | ||| ||| || || ||||| || Sbjct 1515116 GGAATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCG 1515175 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGT 193336 ||||| | ||| || || ||||| || Sbjct 1515176 ACTTCCAAAGTGATGGTCTTACCAGT 1515201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899653995155520