Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F000747785.1_202014-06-
30] 36 sequences; 11,165,408 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq2 161 3e-34
seq27 111 5e-19
seq14 98.7 3e-15
seq8 93.3 1e-13
>seq2
Length=945054
Score = 161 bits (178), Expect = 3e-34
Identities = 343/509 (67%), Gaps = 5/509 (1%)
Strand=Plus/Plus
Query 156026 TGGCTCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCG 156082
|||||| | |||| || || |||| |||||| ||||| || || || || ||
Sbjct 341033 TGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAACGTAACG 341092
Query 156083 AGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCC 156142
||||| || ||||| |||| | ||| ||||||||||| || ||||| || || || ||
Sbjct 341093 GGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGTTAGTACC 341152
Query 156143 GCGAATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCA 156202
||| | ||||| | || |||| || ||||| || | ||||||||||| |
Sbjct 341153 AGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACCAGCGGT 341212
Query 156203 TTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTC 156262
||||| || || |||||||| | ||| | | ||||||||||||| ||||| || |
Sbjct 341213 CTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAATCTTCCTT 341272
Query 156263 CATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGT 156322
||| | | ||| | || || | ||| || | || || ||||| ||||| |||||
Sbjct 341273 CATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAAAAGTGT 341332
Query 156323 AGGTGTTGCATGAATAAAATA-CTTATTAGACATATAATCGTATGTCTCCTTAATCTTCT 156381
||| | || || | || || |||| |||||| | ||| || ||| || ||| |
Sbjct 341333 AGGCGAAGCGTGTGTGAAGTATCTTA-GAGACATTAGGTTGTAAGTTTCCAAAACCTTTT 341391
Query 156382 CAAGATTAGACCCGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTA 156441
||| || ||||| |||| || || || ||||| ||| || |||||||| ||
Sbjct 341392 CAATATCTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGACGTTCAG 341451
Query 156442 CAATCACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAAT 156501
||| | || | |||| || | ||| | ||||||| || || || ||||| || |
Sbjct 341452 CAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGAAGTAGT 341511
Query 156502 CAAACAGAAAATCACGGTTGTAATCAATC 156530
|| | ||||| | || ||| |||||
Sbjct 341512 TGAATTGGAAATCTCTGTCGTAGACAATC 341540
Score = 109 bits (120), Expect = 2e-18
Identities = 333/502 (66%), Gaps = 16/502 (3%)
Strand=Plus/Minus
Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909
|| || || ||||||| | | ||||| || || | | ||| | ||| ||||| |
Sbjct 640958 CTGTCGAATCTACCAGGTCTCATCAATGCGGGATCAAGAACATCAGGTCTATTTGTACCG 640899
Query 288910 GCCAATACAACAATA-GAT-TCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGAT 288967
|| | |||||||| ||| || | | | || |||||||| ||||| |||||
Sbjct 640898 GCAAGAACAACAATTTGATCTCTGGAAG--TGAAACCATCCATCTCAACTAAAAGTTGAT 640841
Query 288968 TAAGTGTTTGTTCCCTTTCATCATTTGAACCTC---TTGAATCACCCGAATCGCTCCttt 289024
| | || ||| |||||||| |||| ||||| ||| | |||| || ||| |||
Sbjct 640840 TCAAAGTGGCTTCTCTTTCATCGTTTGCACCTCCCATTGCACCACCTTT-TC-CTC-TTT 640784
Query 289025 ttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAG--AATTTTGTCTCGC 289082
||||||| |||||| |||||||| | ||| || | || | || ||| || ||
Sbjct 640783 CCTTACCAATAGCATCGATTTCGTCCACGAAGATAATTGCTGGGGCTAACTTT--CTTGC 640726
Query 289083 AATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTC 289142
| | || || || | |||||||| || |||| ||||||| ||||||||||||||||
Sbjct 640725 GTTCTCGAACAAATCACGAACACGGGAAGCACCAACACCAACAAACATTTCTACAAATTC 640666
Query 289143 AGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAG 289202
||| | || || | |||| ||| |||||| || || ||| | || | |
Sbjct 640665 GGAACCTGACACAGACAAAAATGGAACACCTGCTTCACCGGCAGTTGCTTTTGCTAACAA 640606
Query 289203 TGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGC-CCCAG 289261
|| |||||||| || ||||| || ||| | | || |||| | || || ||||
Sbjct 640605 AGTTTTACCTGTACCTGGTGGACCAGATAAAATTGCACCTCTTGGGATTTGAGCACCCAA 640546
Query 289262 CAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTG 289321
| || || ||||| || ||| ||| || | || | |||| || ||| |||||
Sbjct 640545 C-TTTTTGTACTTCTCTGGCTTCTGTAAGAAATGGACGAATTCCATAATTTCGCTTTTTG 640487
Query 289322 CCTCATCACATCCTGCTACATC 289343
| |||| ||| ||||| |||||
Sbjct 640486 CTTCATTACAACCTGCCACATC 640465
Score = 96.9 bits (106), Expect = 1e-14
Identities = 121/166 (73%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 155589 ATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATCTCACAG 155648
||||| |||| ||||| || || || || | || |||||| || || |||||
Sbjct 340596 ATAGAAGCCAAGTTACAAACAGCGGTTTCTTCTGGGTTAGAGTATTCAACGATTTCACAA 340655
Query 155649 CACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCA 155708
|||| ||| ||| |||||| || || || ||||| || ||| || |||||||||||
Sbjct 340656 CACAAGTTCGAAGACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCA 340715
Query 155709 TCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCA 155754
||||||||||| ||| ||||||| || || || | || || ||||
Sbjct 340716 TCCTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCA 340761
>seq27
Length=1195410
Score = 111 bits (122), Expect = 5e-19
Identities = 483/753 (64%), Gaps = 17/753 (2%)
Strand=Plus/Minus
Query 155628 CTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGG 155687
|| || || || || ||||| || || ||||| ||| ||| ||||| || ||||||
Sbjct 100740 CTATACTCCACGATTTCACAACAAAGATTAGACGACTTAATGACACCTAAGTTTTTCTGG 100681
Query 155688 TTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGT 155747
|| || || || || | |||||| || || ||| | || |||||||||| | ||
Sbjct 100680 TTGGACTTCTCATTGCATGAATCCTTATAAAGCATGAAAGGAACTCCTGTCTCCGTTTGA 100621
Query 155748 GCGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTG-TTGTATCTGCCTTC 155806
| ||||| | ||| | | | || || |||| || ||| | | |||
Sbjct 100620 CTTTGTAGAATTTCCGACCAAATTTGTTGCGCTTTCATTTTTTTCATTGGAA-TCAATTC 100562
Query 155807 CGACTCATA--TTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCA 155864
|||||| ||||||||| | ||| | | || ||| || || ||| | ||
Sbjct 100561 TCGCTCATACTTTTCATATA--GGGTTTTGAACTCTGTACCATAGCAGTCAGATAAACCT 100504
Query 155865 GGGCACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAAT 155924
| | ||| || | ||| | |||||| || |||| ||||| | ||||||
Sbjct 100503 GTTGCTTCATCTGGACTAAAAATGGACCAATCTTCATTATTTTCAACACGTTGCATAAAA 100444
Query 155925 ACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGA 155984
| ||| ||| | |||||| || | ||| | ||| | || || | ||||||
Sbjct 100443 AGATCCGGAATCCATAGAGCATAAAATAAGTCTCGGGCCCTCATTTCTTCTTTTCCGTGA 100384
Query 155985 TTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCA 156044
||||| | ||| | |||||| || |||||| ||| ||| |||| || ||| |
Sbjct 100383 TTCTTTCTTAGTTGTAAGAAGTCAATAATATCCCCATGCCATGGTTCCAAGTATATACAA 100324
Query 156045 AAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACA 156101
|| |||| | ||| ||||| ||||| ||||| | || || || || || ||
Sbjct 100323 AAGGCACCAGGGCGTTTGTTCCCACCTTGATCGACATATCTTGCTGTGTTGTTAAAAACC 100264
Query 156102 CCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGAT 156161
| |||||||||| | |||||| ||||| ||||| | || |||| | |||| |
Sbjct 100263 CGCAGCATAGGAACTAAACCATTTGAAGTACCATTCGACCCTGAGATATAAGCACCATTT 100204
Query 156162 GAGCGAACATTATGA-ATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCA 156220
| | | ||| ||| | ||||| |||||||||||| || || || || |||
Sbjct 100203 GCCCTTATATT-TGACACATGTATTCCAATACCACCAGATGCCTTTGATATCAAAGCAGT 100145
Query 156221 TTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCA 156280
| | || ||| || ||||||| |||||||| || |||||||| | | ||| ||||
Sbjct 100144 CTTGTGTAAAGTCTTATAAATACCATCAATAGAGTCTTCTTCCATAGCCACAAGAAAGCA 100085
Query 156281 CGA--ACTTA-ATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAAT 156337
|| || | ||||| | || | || ||||| | ||||||| || |||||
Sbjct 100084 TGATGACAAATATTGATTTACTG---TACCGCTATTGAACAAAGTAGGTGAAGCGTGAAT 100028
Query 156338 AAAATACTTATTAGACATATAATCGTATGTCTC 156370
||||||||| | ||||| | | ||| |||||
Sbjct 100027 AAAATACTTTTGTGACATTAATTGGTAAGTCTC 99995
>seq14
Length=1201207
Score = 98.7 bits (108), Expect = 3e-15
Identities = 175/253 (69%), Gaps = 2/253 (1%)
Strand=Plus/Plus
Query 302553 ATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGT 302612
||| ||| || |||||| ||||| | | || | ||||||||| || ||||| || ||
Sbjct 111250 ATCGTAATGAACCATAATATCTTCTAAAGCTTTAACTAAACGACGTTGGATATACCCGGT 111309
Query 302613 TGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAA 302672
| |||||| ||||| |||||||| | ||| ||||||||||||| |||||||| ||
Sbjct 111310 CTCTGCTGTTTTCACAGCAGTATCAATCAAACCTTCACGACCACCCATCGCATGGAAAAA 111369
Query 302673 TAGCTCTTCCGGTCGT-AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGG 302731
| ||||| || | | || | ||| || ||| | ||||||||||| | || |
Sbjct 111370 GAACTCTTGAGGAGTTAAACCTCTCAAGTAA-GAGTTTTCAACGAAACCCTTTGATTCTG 111428
Query 302732 GCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATAC 302791
| || | ||| ||| | || ||||| ||||| | | || | ||| | | ||||
Sbjct 111429 GAGAGTAGTCATCCTTAGAGAAATGTGGTAGGGTACGATCGGCAAACCCGAAAGCAATAC 111488
Query 302792 GCTTTCCATCAAC 302804
|||| || || ||
Sbjct 111489 GCTTACCTTCCAC 111501
>seq8
Length=929314
Score = 93.3 bits (102), Expect = 1e-13
Identities = 158/227 (70%), Gaps = 4/227 (2%)
Strand=Plus/Plus
Query 60142 TGTGAAAATATACCTCTCGGAT--GCTGCGTCCTTGCCACCCATAAGACGGGTTCCAAAT 60199
|||||| ||||| ||||||| |||| || || ||||| || | ||| || ||
Sbjct 456717 TGTGAAGATATA--TCTCGGAGCAGCTGAATCTTTACCACCAGTAGCTCTGGTACCGAAA 456774
Query 60200 TGTCCGTTTGGCTGGAATAGATTAATGTTGTTAGAGCCTACGAAATTTTGAGCGAGACCA 60259
|| || |||| || | | ||| |||||||| || || |||| ||| || | ||||
Sbjct 456775 GCACCATTAGGCTTCAACAAGTAAATATTGTTAGAACCAACAAAATCTTGGGCTAAACCA 456834
Query 60260 ACAATAGCACCATTTAAACTGGCTTCACCGTGATGATATCCAGAATGTTCTGAAACATAT 60319
||||| | || || |||||||||||||| ||||| | |||||| ||||||||
Sbjct 456835 ACAATCGTTTGATATAGGGAAGCTTCACCGTGATGGTATCCGGTATGTTCAGAAACATAA 456894
Query 60320 CCACTGAATTGTGCGACTTTAATTTCGGAGTGGAGTTTTTTCTTGAA 60366
|||| | ||| || || || ||||| || | | ||| |||| ||
Sbjct 456895 CCACCTAGTTGAGCAACCTTGATTTCTGATTTTAAATTTCTCTTAAA 456941
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471816921124132
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