Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F000747785.1_202014-06- 30] 36 sequences; 11,165,408 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq8 105 8e-18 seq36 95.1 2e-14 >seq8 Length=929314 Score = 105 bits (116), Expect = 8e-18 Identities = 178/257 (69%), Gaps = 22/257 (9%) Strand=Plus/Minus Query 162943 TCAAAGAAAGGTTATTTATGCCA----TAAGaaaaaaaTTTAGATCAAAAGGGGATTTTA 162998 ||||||||||||||| |||||| ||||| ||| || | |||| || | Sbjct 456966 TCAAAGAAAGGTTATCTATGCCTGTTTTAAGAGAAAT-TTAAAATCAGAA---------A 456917 Query 162999 TTAAGGTTGCTCAATTAAGTGGGTATGTTGCGGAACAAACAGACTATAAACACGGTGAAC 163058 | |||||||||||| || |||| |||||| | ||||| || | || | ||||||||| Sbjct 456916 TCAAGGTTGCTCAACTAGGTGGTTATGTTTCTGAACATACCGGATACCATCACGGTGAAG 456857 Query 163059 AAAATTTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATATAG 163118 ||| | |||| || || || |||||||||||||||||| | || ||||| Sbjct 456856 CTTCCCTATATCAAACGATTGTTGGTTTAGCCCAAGATTTTGTTGGTTCTAACAATAT-- 456799 Query 163119 CATTACTTG----AACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCT 163174 ||||||| | ||| ||||| || ||||||||| || ||||||||||| Sbjct 456798 --TTACTTGTTGAAGCCTAATGGTGCTTTCGGTACCAGAGCTACTGGTGGTAAAGATTCA 456741 Query 163175 GCGGCATCAAGATATAT 163191 || || | |||||||| Sbjct 456740 GCTGCTCCGAGATATAT 456724 >seq36 Length=1733117 Score = 95.1 bits (104), Expect = 2e-14 Identities = 234/350 (67%), Gaps = 9/350 (3%) Strand=Plus/Minus Query 168459 TTTGATTTAAGTGGTGGAACTATCCCACTTCTTACTACCaaaaaaaTTGTATACAC---T 168515 |||||||| |||| || | | |||||||| |||||||| ||| || | || | Sbjct 871411 TTTGATTTGAGTGATGATAAATTTCCACTTCTAACTACCAAGAAAGTTTTCACCAAGGGT 871352 Query 168516 AACATTCTTAAAGAACTTTTATGGGTTATAAAAGGTTCAACTGATTCAAAACAATTAAAT 168575 | |||||| || ||||||||| |||| || | |||||| || || | | Sbjct 871351 ATTATTCTT---GAGCTTTTATGGTTTATTTCTGGCTGTACTGATGGTAAGAAACTCTCT 871295 Query 168576 GATATAGGTGTTAAAGTTTGGAACGATAATGGTTCTCGTGAATTTTTAGATTTATGTGGT 168635 ||| |||||| || | ||| | | || || || ||||| | || || | | || Sbjct 871294 GATCAAGGTGTGAAGATCTGGGAAGGGAACGGATCCCGTGAGTACTTGGACTCCTTGGGA 871235 Query 168636 TTTACCGAAAGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCA 168695 |||| || ||| || |||||||| || ||| ||||||| || |||||||||||| Sbjct 871234 CTTACAGATAGACGTGAGGGTGATTTGGGACCAGTTTATGGGTTCCAATGGAGACATTTC 871175 Query 168696 GGAGCTCAATATATTGAC-TGTGATACAGATTACACCGGACAAGGAGTAGACCAATTAAG 168754 ||||| |||| | ||| ||||| ||||| | |||||||| || || || ||||| Sbjct 871174 GGAGCAGAATACA-AGACATGTGACGATGATTATTCGGGACAAGGTGTTGATCAGTTAAG 871116 Query 168755 TCAAACTATAAATACTTTACACAACAATCCGGAAAATAGAA-GAATATTA 168803 | || ||| || | |||||||| | |||||| || ||||| Sbjct 871115 CGATGTGATTCATAAGTTGAAGAACAATCCTTACGATAGAAGGATTATTA 871066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635177314170080