Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F000747785.1_202014-06- 30] 36 sequences; 11,165,408 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq33 129 1e-24 seq32 129 1e-24 seq19 122 2e-22 >seq33 Length=1695378 Score = 129 bits (142), Expect = 1e-24 Identities = 162/222 (73%), Gaps = 3/222 (1%) Strand=Plus/Plus Query 206164 AAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAA 206223 |||||| || || ||| ||| ||| | ||||| || || |||||||||||||| ||| Sbjct 913709 AAAATG---CAAATCTTTGTCAAGACGTTAACAGGTAAGACCATCACTTTGGAAGTTGAA 913765 Query 206224 AGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCG 206283 ||||||||| | || || ||| ||||| ||||| || ||||| ||| || Sbjct 913766 TCTTCTGACACTATTGACAATGTGAAGTCTAAGATCCAAGATAAGGAAGGTATTCCTCCA 913825 Query 206284 GACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGAT 206343 ||| |||||| | || || || || ||||| || ||||| ||||| ||| | |||| Sbjct 913826 GACCAACAAAGATTGATTTTTGCGGGTAAGCAATTAGAAGACGGAAGAACTCTATCCGAC 913885 Query 206344 TACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 |||||| |||| || || ||||| |||||| | || |||||| Sbjct 913886 TACAACATCCAAAAGGAATCTACACTTCACTTAGTCTTGAGA 913927 Score = 122 bits (134), Expect = 2e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 ||||| ||||| |||||||||||||| ||| ||||||||| | || || ||| Sbjct 913964 ACAGGCAAAACCATCACTTTGGAAGTTGAATCTTCTGACACTATTGACAATGTGAAGTCT 914023 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||||||||| || ||||| ||| || ||| |||||| | || || || || || Sbjct 914024 AAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAACAAAGATTGATTTTTGCTGGTAAA 914083 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || || ||||| ||||| ||| | |||| |||||| | || || || ||||| |||||| Sbjct 914084 CAATTAGAAGACGGAAGAACTCTATCCGACTACAACATTCAAAAGGAATCTACACTTCAC 914143 Query 206374 CTTGTTTTGAGA 206385 | || |||||| Sbjct 914144 TTAGTCTTGAGA 914155 Score = 122 bits (134), Expect = 2e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 ||||| || || |||||||||||||| ||| ||||||||| | || || ||| Sbjct 914192 ACAGGTAAGACTATCACTTTGGAAGTCGAATCTTCTGACACTATTGACAATGTGAAGTCT 914251 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||||||||| |||||||| ||| || ||| |||||| | || || || || || Sbjct 914252 AAGATTCAAGATAAAGAAGGTATTCCTCCAGACCAACAAAGATTGATTTTTGCGGGTAAA 914311 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || || ||||| ||||| ||| | |||| |||||| | || || || ||||| |||||| Sbjct 914312 CAATTAGAAGACGGAAGAACTCTATCCGACTACAACATTCAAAAGGAATCTACACTTCAC 914371 Query 206374 CTTGTTTTGAGA 206385 | || |||||| Sbjct 914372 TTAGTCTTGAGA 914383 Score = 122 bits (134), Expect = 2e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 ||||| || || |||||||||||||| ||| ||||||||| | || || ||| Sbjct 914420 ACAGGTAAGACTATCACTTTGGAAGTCGAATCTTCTGACACTATTGATAATGTGAAGTCT 914479 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||||||||| |||||||| ||| || ||| |||||| | || || || || || Sbjct 914480 AAGATTCAAGATAAAGAAGGTATTCCTCCAGACCAACAAAGATTGATTTTTGCGGGTAAA 914539 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || || ||||| ||||| ||| | |||| |||||| | || || || ||||| |||||| Sbjct 914540 CAATTAGAAGACGGAAGAACTCTATCCGACTACAACATTCAAAAGGAATCTACACTTCAC 914599 Query 206374 CTTGTTTTGAGA 206385 | || |||||| Sbjct 914600 TTAGTCTTGAGA 914611 Score = 114 bits (126), Expect = 3e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 ||||| || || |||||||||||||| ||| ||||||||| | || || ||| Sbjct 914648 ACAGGTAAGACTATCACTTTGGAAGTCGAATCTTCTGACACTATTGACAATGTGAAGTCT 914707 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||||||||| || ||||| ||| || ||| |||||| | || || || || ||| Sbjct 914708 AAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAACAAAGATTGATTTTTGCTGGTAAG 914767 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || || ||||| ||||| ||| | |||| |||||| |||| || || || || || ||| Sbjct 914768 CAATTAGAAGACGGAAGAACTCTATCCGACTACAACATCCAAAAGGAATCCACACTCCAC 914827 Query 206374 CTTGTTTTGAG 206384 | || ||||| Sbjct 914828 TTGGTCTTGAG 914838 >seq32 Length=1561830 Score = 129 bits (142), Expect = 1e-24 Identities = 145/194 (75%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || |||||||||||||| ||| ||||||||| | || || ||| Sbjct 1515201 ACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCTGACACCATTGACAATGTCAAGTCC 1515142 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||||||||| || ||||| ||| || ||| |||||| | ||||| || || ||| Sbjct 1515141 AAGATTCAAGACAAGGAAGGTATTCCACCAGACCAACAAAGATTGATCTTTGCTGGTAAG 1515082 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || |||||||| || || |||||| | || |||||| |||| || || || || |||||| Sbjct 1515081 CAATTGGAAGACGGTAGAACTTTGTCTGACTACAACATCCAAAAGGAATCCACCCTTCAC 1515022 Query 206374 CTTGTTTTGAGACT 206387 | || |||||||| Sbjct 1515021 TTGGTCTTGAGACT 1515008 >seq19 Length=169523 Score = 122 bits (134), Expect = 2e-22 Identities = 148/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || || || || || || || || |||||||| ||| ||| ||||| | || Sbjct 25638 CAAGACCCTAACTGGTAAGACTATTACCTTGGAAGTCGAATCTTCCGACACCATTGACAA 25697 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||| ||||| || ||||| ||| || ||| |||||| | ||||| Sbjct 25698 TGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAACAAAGATTGATCTT 25757 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || ||||| ||||||||||| || |||||| | || |||||| |||| || || || Sbjct 25758 TGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATCCAAAAGGAATC 25817 Query 206364 TACTCTTCACCTTGTTTTGAGA 206385 ||| |||||| | || |||||| Sbjct 25818 TACCCTTCACTTGGTCTTGAGA 25839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820254885156