Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F000747785.1_202014-06- 30] 36 sequences; 11,165,408 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq2 282 6e-71 seq32 221 2e-52 seq27 132 7e-26 >seq2 Length=945054 Score = 282 bits (312), Expect = 6e-71 Identities = 1375/2154 (64%), Gaps = 55/2154 (3%) Strand=Plus/Plus Query 68363 CCTTATCCAATGTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATAC 68422 |||| || | || ||||| || | | ||||| | || || | ||| |||||||||| Sbjct 339664 CCTTGTCAATAGTGAACTGGATAGCGGCAGATGCAGCTTGAGTTCTTAGGTAGTACATAC 339723 Query 68423 CGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTG 68482 | || |||| ||| ||||||||||||||||||| || | || | ||| Sbjct 339724 CAGTCTTCAAACCCTTCTTCCATCCGTAGAAATGCATGGAAGTCAACTTACCCATAGTTG 339783 Query 68483 GATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCG 68542 | | || ||||| |||| |||||| ||||||||| |||| | | || || | Sbjct 339784 GGGCACGAATGTGAATGTTCAACGATTGGGATTGATCGATATAAGCAGCACGGTCAGCGG 339843 Query 68543 CCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTT--AAAAATCTGTTTGAT 68600 |||| | ||||| |||||| | |||||||||| |||||| | |||||| || | | Sbjct 339844 CCATATCGATAATGTGCTTTTGCGATATTTCCCAAACAGTCTTGTATAAATCTTTTAGCT 339903 Query 68601 ATCATCTGGAAGGCTCGTA--TTTTGAATGGATCCACCATCGGATATAATTATATTCTTG 68658 | | ||| | | | | ||||| || || ||| ||| | || || ||| Sbjct 339904 CTTGTG-GGATGTTTGGCAAGTTTTGGATAGAACCATTATCAGCGATGATATGGGACTTC 339962 Query 68659 ATCTCATCATTCCACAATTTTCTC-TCCGTTAAAACTCTAAGGAGATGCGGATTAACTAT 68717 || | |||| ||| ||| | || ||| | | || | | || || || || Sbjct 339963 ATAGCTTCATCCCA-AATACCCAAATCAACCAAATCACGTAGCAAGTAAGGGTTGACGAT 340021 Query 68718 TTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGA 68777 ||| ||||| ||||||||||| | ||||| ||| || || || ||||| || | | | Sbjct 340022 TTGGAATTCACCAGATAACACACGACGAGAGTACATGTTGGAAGTGTATGGCTCGAAACA 340081 Query 68778 TTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACT 68837 || || | |||| ||||| | || || || |||||||| || || | ||| ||| Sbjct 340082 CTCGTTGTAACCCAAGATTTGGGATGTAGAAGCGGTTGGCATTGGAGCGAGCAACAAAGA 340141 Query 68838 ATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGA 68897 ||||| ||||| ||| |||||| | | || | | | ||| ||||| || | || Sbjct 340142 GTTTCTTAGACCGTGTTGCTTGATTTCAGCCTTCAAGTTATCCCATTCCCATAGGTTAGT 340201 Query 68898 TGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATA 68957 ||| | ||| |||||| |||||| | || | | ||| || || | Sbjct 340202 TGGGGTCTTACCCCATAGATCGAATTGTAACTTACCTTCAGATGCTGGAGAGCCTGGGAA 340261 Query 68958 TGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATA 69017 | |||||| || ||||| | | || | ||| || || | ||||| | || Sbjct 340262 AGATTCATATGGACCTTCTTCCTTTGCCAATTCCATGGAGGCTTCACAAGCACCATGGTA 340321 Query 69018 AATTGTTTCGAAAATCTTCTTATTGAGATCT-TGTGCTTCTAGACTATCGAATGGATAAT 69076 || ||||| || || | || | |||| | ||||||| | || ||||| || Sbjct 340322 GATAGTTTCAAAGATTTGGACGTTCA-ATCTCTTTGCTTCTTCAGAGTCAAATGGCAAAC 340380 Query 69077 GTAAAAGAATAAATGCATCTGCCAATCCCTGAAC-CCCAATACCGATAGGTCTATGTCTC 69135 ||| | || || || || || || || ||||| |||||| | ||||||||||||||| Sbjct 340381 GTAGCATCATGAAAGCGTCGGCTAAACCTTGAACACCCAATGCA-ATAGGTCTATGTCTC 340439 Query 69136 TTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGA 69195 | ||||| ||| ||| | || |||||||| ||| || || ||| | || | Sbjct 340440 ATGTTTGATCTTCTAGCAGTTTCAACTGGATAATAGTTACGGTCAATGATTCTGTTCAAG 340499 Query 69196 TTTCG-GACTACTACTT-----TAAC---CACGTCCTTTAGTTTGAGAAAATCAAATCGT 69246 || || | | | ||| || | || | ||| | ||| | | | || | Sbjct 340500 TTGCGAGTCAAAACCTTAGAGATATCGTGCAACTTCTTGAAGTTGT-AGGTTTGAGTCTT 340558 Query 69247 -CCATC------TATAACAA---ACATATTCAGTGCTACAGATGCTAGATTACAAACTGC 69296 ||||| ||| ||| || || || | ||| || | |||||||| || Sbjct 340559 ACCATCGTTTGATATTTCAATGAACGCTGGCAAAGCGATAGAAGCCAAGTTACAAACAGC 340618 Query 69297 TACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGT 69356 || | | || | |||| | || || ||| | || | | |||||||| Sbjct 340619 GGTTTCTTCTGGGTTAGAGTATTCAACGATTTCACAACACAAGTTCGAAGACTTGATAGT 340678 Query 69357 CCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGT 69416 |||| || | ||||||||||| |||||||| || |||||||| || || || || || Sbjct 340679 ACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCCTTGTATAGCATGAATGGGGT 340738 Query 69417 ACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCT--AGCATTTATTACG 69474 ||||||||| | |||| ||| | |||| | ||| | || | ||| || | | Sbjct 340739 ACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACA--ACTTTTGAGCCTTGA---CA 340793 Query 69475 GTCTTG-TA--ACG--CTTCTCTTTTTCATATTGT--GTATATAGCCGTTCGAATTCATC 69527 ||||| || ||| ||||||| | | || || ||| | || ||| |||||||| Sbjct 340794 GTCTTTCTACCACGGCCTTCTCTCT--CGTAACGTTCGTACAATGC--TTCAAATTCATC 340849 Query 69528 TCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATC 69587 || ||||||| || || || ||| |||||| | | ||| | ||| | || | Sbjct 340850 ACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGAGAGAACAAAGTCCAATCTTCGTT 340909 Query 69588 ATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGT 69647 | || |||| ||||| || ||||| || ||||| || ||| || | ||||| | Sbjct 340910 CTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCTCTTGC 340969 Query 69648 TCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATG 69707 | ||||||| || || || ||| | | |||| || || | ||||| || || Sbjct 340970 ACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATATCTGAGTG 341029 Query 69708 CCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTA 69767 |||||| || | || | || | | | || |||| || || || || || || | ||| Sbjct 341030 CCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAACGTA 341089 Query 69768 TCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGT 69827 | ||||||||| || | || | | ||| ||||||||||| ||||| |||| || || Sbjct 341090 ACGGGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGTTAGT 341149 Query 69828 TCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGC 69887 |||| ||| ||| || | | ||||| || ||| | ||| || || || || Sbjct 341150 ACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACCAGC 341209 Query 69888 CATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATC 69947 | |||||||| | ||||| ||||| ||||| || ||||| || ||| ||| || Sbjct 341210 GGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAATCTTC 341269 Query 69948 TATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAA 70007 ||||| | || ||||| |||||||| |||| ||| || ||||| || | Sbjct 341270 CTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAAAAG 341329 Query 70008 TGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGA 70067 |||||| || ||||| ||||| || || ||| | || ||||| ||||| | | | Sbjct 341330 TGTAGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCCAAAACCTT 341389 Query 70068 TTCTATATC-CCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTT 70126 ||| ||||| | || | || || || | || || | ||| | ||| || ||||| |||| Sbjct 341390 TTCAATATCTCTACCG-TGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGACGTT 341448 Query 70127 CTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAAT 70186 | | ||| || ||| | | || ||| || ||||| || || || || || | Sbjct 341449 CAGCAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGAAGT 341508 Query 70187 AGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGG 70246 ||||| || || ||||| ||||| | ||| |||| || | |||| || | | Sbjct 341509 AGTTGAATTGGAAATCTCTGTCGTAGACAATCGCAGAGTTCAAAGTATCTTTGTTCTCCA 341568 Query 70247 TAACTATATCCATA-ACAGTAGGTGAGATAATCGGAGATCGTTTACCATTTTTAGGATTA 70305 | || || | |||| || | || || || || || | ||||| | || || || Sbjct 341569 TGACGATGT-CATACACCTCATCCGAAATCATAGGCGAGTGAATACCAGTCTTTGGGTTG 341627 Query 70306 ACATAGTTGAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAA 70365 || | || | || ||||| | || | ||| | || | |||| |||||| || Sbjct 341628 ACCCATCTGTACAAGTCTTCGACCACTTGCGAAAACTGCTTCGTGGTTTGCTTGTGCAAG 341687 Query 70366 TTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAGTACAAGTA 70425 || || ||||| ||||| || || | | |||| || || || || || || || ||| Sbjct 341688 TTAGAAATGGCAATTCTAGCGGCCAAAGTAGCGTAATCTGGGTGAATGGTGGT-CATGTA 341746 Query 70426 -GCTGCTATTTCCGCAGCTAACGTATCTAATTCTATAGTTGTAACTCCGTTATA 70478 || | |||| ||||| || |||||||||| | ||| || || || | ||| Sbjct 341747 GGCACATGTTTCAGCAGCCAAGTTATCTAATTCAACAGTCGTTACACCTTCATA 341800 >seq32 Length=1561830 Score = 221 bits (244), Expect = 2e-52 Identities = 591/885 (67%), Gaps = 20/885 (2%) Strand=Plus/Minus Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 |||||||| || || | || ||||| ||||| ||||| || |||| || || ||| Sbjct 411929 TTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTT 411870 Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445 ||||| || || || || ||||| | || || | ||| || ||||| | | Sbjct 411869 TCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGT 411810 Query 39446 AATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGT 39505 | ||| |||||||||||||| | |||| ||||||| ||| ||||| || | || Sbjct 411809 AGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGA 411750 Query 39506 TTAACTGGTAGAGCCTCCGTTA-GAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTAT 39564 ||| |||||||| || | | | | ||||||| |||| || || || ||||| || || Sbjct 411749 GAAACGGGTAGAGCGTCGATGAAGTATCTCTTTT-CGATCTCAACAGCTTCTGTGATGAT 411691 Query 39565 CGATGTTACTACCTCATCA-CTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGA 39623 | || | || | || | | | | | ||||| | || | || ||||| | Sbjct 411690 TCTTTCGACAATCTTTGGATCTGGCTTGTT-CTTCAAATGATGGAATAGCAAACAGGCAA 411632 Query 39624 AGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCA 39683 |||| || | || |||||||| | ||| |||||||| || || || | || |||| Sbjct 411631 AGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACCTGGCA 411572 Query 39684 TTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTT 39743 | | ||| ||| || | ||| || ||||||||||| || ||||| || || | |||| Sbjct 411571 TCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCAAAGGAACCAGAGAAAAACACACCTT 411512 Query 39744 CTACTGCTGCAAATGCAACAAGTCTCTCTCCGTA----ACTTGTATCATTATGTATCCA- 39798 | || || || || ||||| | ||| || |||| ||| |||| | | ||||| Sbjct 411511 CCACGGCAGCGAACGCAACCAATCTTTCAGCGTATAGGGCTT-CGTCATCACGAATCCAT 411453 Query 39799 CTTCTGTGCCCAATCAGCTTTCTTCTTT-ACACAAGGCATTGTTTCTATAGCATTAAAGA 39857 || || ||||| | ||| || |||||| | || || ||||| || ||||| || | Sbjct 411452 CTAATG-GCCCATTGAGCCTT-TTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAACA 411395 Query 39858 GATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTG 39917 | | | ||| | | ||| || | || || || || |||| ||| |||| | Sbjct 411394 AGAAGTCGTGTTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAGTTTCGG 411335 Query 39918 AATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTA 39977 | || |||||||| ||| || || || ||||| ||||| | ||||| | |||||| | Sbjct 411334 AGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGCA 411275 Query 39978 CCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAA 40037 |||| | | | || ||||| |||| ||||| ||||| || ||||| ||| ||||| | Sbjct 411274 CCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAGA 411215 Query 40038 ATGCCAATACATGTTTA-ATAAAATATTTTTC-ATCGGGTGTCAAT---TTATTCCAGTC 40092 | || | || | | | || ||| || | || || || ||| | || |||||||| Sbjct 411214 ACGCAAGCAC-TCTGGAGATGAAAAATCTCTCGTTCTCGT-TCATTCTGTTGTTCCAGTC 411157 Query 40093 ATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTT 40152 || | ||| || || | ||| | ||||||||| |||||||| || ||||| || | || Sbjct 411156 ATGAAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTCTCTT 411097 Query 40153 GTACATGTTCCATATATCACGATATTGTATTGGAAAAATAACAAA 40197 || | ||| || || | || | ||||| |||| ||||| Sbjct 411096 ATAAGCCTCCCAGATTTCGTGGTACTTGATTGGGAAAAGCACAAA 411052 >seq27 Length=1195410 Score = 132 bits (146), Expect = 7e-26 Identities = 201/286 (70%), Gaps = 0/286 (0%) Strand=Plus/Minus Query 69555 TTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATC 69614 ||||| ||||| | | ||||| | |||| || | ||| |||| |||||| ||||| Sbjct 100498 TTCATCTGGACTAAAAATGGACCAATCTTCATTATTTTCAACACGTTGCATAAAAAGATC 100439 Query 69615 GGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttt 69674 |||||||| ||||| ||| | |||| || || ||||||| ||||| ||| || Sbjct 100438 CGGAATCCATAGAGCATAAAATAAGTCTCGGGCCCTCATTTCTTCTTTTCCGTGATTCTT 100379 Query 69675 tttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGAC 69734 | | || | | || || |||||||| |||||||||||| | ||||| | | | Sbjct 100378 TCTTAGTTGTAAGAAGTCAATAATATCCCCATGCCATGGTTCCAAGTATATACAAAAGGC 100319 Query 69735 TCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAG 69794 || || ||||| || || || ||||| | ||||| || ||||| ||| | || | ||| Sbjct 100318 ACCAGGGCGTTTGTTCCCACCTTGATCGACATATCTTGCTGTGTTGTTAAAAACCCGCAG 100259 Query 69795 CATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAA 69840 ||| |||| | |||||| || ||||||| | || || |||||| Sbjct 100258 CATAGGAACTAAACCATTTGAAGTACCATTCGACCCTGAGATATAA 100213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908490891040